Dgla003731.1
Basic Information
- Insect
- Drosophila glabriapex
- Gene Symbol
- -
- Assembly
- GCA_035042305.1
- Location
- JAWNLN010000046.1:4015124-4020355[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.044 2.8 8.5 2.8 2 23 145 166 144 166 0.97 2 13 0.00014 0.0087 16.4 1.3 1 23 408 430 408 430 0.98 3 13 7.6 4.8e+02 1.4 0.8 1 23 436 459 436 459 0.88 4 13 9.5 5.9e+02 1.1 0.3 1 23 488 511 488 511 0.89 5 13 0.012 0.77 10.2 2.1 6 23 805 822 801 822 0.93 6 13 0.29 18 5.9 1.9 1 23 828 851 828 851 0.98 7 13 7.4 4.6e+02 1.5 1.0 2 19 891 909 887 911 0.55 8 13 0.0043 0.27 11.7 0.8 1 23 931 954 931 954 0.97 9 13 0.012 0.73 10.3 0.4 1 23 1172 1195 1172 1195 0.92 10 13 0.00035 0.022 15.1 3.0 1 23 1209 1231 1209 1231 0.98 11 13 0.0016 0.1 13.0 4.0 2 23 1264 1288 1263 1288 0.90 12 13 0.093 5.8 7.5 0.2 1 23 1293 1315 1293 1315 0.96 13 13 0.0065 0.41 11.1 1.3 1 23 1321 1344 1321 1344 0.96
Sequence Information
- Coding Sequence
- ATGGCGCACAAACGTTTGAAAGCAGCGGACATGgaaatcaattacaaattcGCATGTCGCTGTTGCCTCAAATCCGAGGCGGAATTCTTCAAGCTGGACTCTCTCATCGACTGTGGCAACAATGAtgccaatgacaatgacaatgatgcATCGTCCACAACAAAATTGCCCCTGTTGCGTTTACTGCTCTTCTGCATGCGCACCGAAAATCTACCAGAGCTGCCGCAATACATTTGCGTGGAATGCCGAAAAAGTTTACAAATTGCCTACTATTTCATACAGAATGGTTTGCGTGCCCACGAAATACTGTGTCGCAAACTGTGTCCGGGCAAGCTGCAAACCAAGCCGCGCATCAACGGACAACATTTAGCCCTAAGGATCGAGGCAAAGGCTGGCGCAGCGTTGCTGGATACGCACAGGGAGAAACCcctaaaatgcaaaatatgcgGTGAGCTTATCCACAATCGCTTGGAGCTGAAACATCATCTACGAATGCATtcagAGTCTCGACACCAGTGTAAATTGTGCAACTTTGTCCCGCTTAAGCATCGCCAGCTACTGGAGCACTATCGCAAATCGCATGGCTTGACAACGGCCCAAATTGAGCATCAGTTGAAAATACGAAGATCGCTGCAGGCGGCTGCCAGTACAACCATAACAAAATCTACAACAGCTGCATCTACAGAAACtcctgccgctgctgctgctgcagatgatgACGGTCAAGTGAAGGTGTGCACAATGGAGGACATGGAGCTGTTGATACCCACAGTGTTGACGCCCGAGGATTTCACGCATCCACAACTAGATGCGGATCAATTGCGTGACATTGAACAGCAATTGACGAGCAGCTCGCTGGGATTGGGCAACACCACAGCTGCGTCCACGGAACCAGTGACGGCAAATGCCAGCGGAAGCAATGCCAATATGAGCATAGGTGCAGAATTTCTTGTCATGCCCGATGGCTCGTTGCAGCAGGTGAATGATGCTGGCGTTGTCTTCGAATATATTGATGATAGTAAAAACGAGGCcagcagagcaacaacagcaagcacaaCGACCAATGTGACGCTGGAGAGCCTGTTGAGTGACTCGAAAACCGATTTAACCTATGATGCAATGGACATTGATCTAAGTCCTATGGTTGTCGATAATGCGCTGCCACATATAACAGtcAACCCCAAGGGACGACCAGCGCCAGCGTCAACTGGTGCCCTGAAACACAAATGCAAGCTGTGTCCCAAAGCATTTCCGACGGTGGCTCGCCTTAAATCTCACCAGCTAACGCATAGCCATTTACCTAAATTTTATTGTGATCAGTGCACATTTTATTCTCTGCGCAGCGCCGATCTCATCCAGCATTATACGAGCGAGCATAATATATGCGTTAGCGATACGAAAGCTAGTCAAGTGGAGAAGTCACCAATGCTGACGGCAATGTTAACGGATCGCAATCGCATCTTCTCCTGCGATATGTGTCTGTTTGAGACGCCGAGCGGCGGTCAGCTGCGCTTGCATTACAGTGATAAGCATCTCATTGTGCCCAGTGAGATACAGCTGCGTCCCAGCTGGATCAGGGATCAGCAAGATGGCAATGCGAAGCTGAAAAGTGGCGATGCCAACACACAACCAGACATTCCACTTGGCATTAAATATCCAACCATGACGCAGtgtgcagcagccacaatggCCACAACGACAGCGAAAACAACAAGCATGGTGCAACAGCCGcaggcaataacaacaaccacaacggcAGTGACTTCCACGGGTTGTATCAATGTTGTTGTCGATGCCAGCTCATTGTTCtttgcagcaactgctgctgaaaCTGTAGGAACAACGGCTGCAACAACGGCTGCGACAACGggtgcaacggcaacaacaacaacgagcgcAACAGCTACAAATTCAAGCACAATTGCAATATTTCCAGAACAATgcctggcaacaacaacaacagcaaaagcagcaataacaaatcaaCAGGAGGCAAGCAATCAGGCAGtgacaacatcagcaacaacaacaacaaatcccaATACTAGCACATTTGGTGATATGCAGGAGTTTATAGATAATACAGATGTGGCAGCCATATGCACAATTCCCGCCGACGATATGCCTGTTGATGGCGATGATATCGTcatcgataataataatataagtctGGATTTTGATGCCGAAAATCTATTTGAGGAATTTGAAGATGTCGAAGTTGGCGAAGAGgttgacgatgacgacgctGAGGatgacgaggatgaggatgaagatgatgcggacaatgatgatgagaaTGATAACAATGATGCGGCTACCGATCAAAATCTCTTGCTAACcagcgacgatgacgatgtggATGACTTTGACGACGAGCAATCGAAGCATTTGCAAAAACCCTATTGCATCTcttgcaacaaaaagtttACCAGCCAATACAAGTTTGAGAATCATATGTTTCTGCATCGCGGTTTGGCACCATATCGCTGCGAGCTGTGCACCAATCTGTACAATATGAAACGTCGGCTTATACGACACTATAAAACGGTTCACAAAAAGATGCCCACGCGAGACATGGTGCAGGCCAAGGGCGACAAGGTAGCCGTGCCGTGTACGGCTATtgaaaagataaatataaattcggACAAAAatCCCTTGCTGATGTGCGCCAAGTGTCCCTTTGAATGTGAGCTGGATGTGGATATGCGCAAGCATTTAAATGCCCATCATGGCATCAATGTTGGCGTTTCCATGCATGCCAACGAAGTGTTTATCATACGTAAACTACCCTTTGAGTGTCCACGCTGCATTCGTTCATTTGCGGCAAAGCGAACGTTGACACGCCACTTGCAGCGTAGCCATTTGGTGGATACAATCATTGAGATGCAGGCGCTTCAATTGACAACCAGTTCGGCGGCAACGACAACCACAgtgacgacaacaaccacattgCCGAACAATGTCAGCGATGGCAATAAGGCCATAACAAATGCGGTTGTGGAGTCCAATAATGGCAatatcgatgtcgatgtcgatctTGGCGATGGCGGCGATGGAAAATGCGAAGAGCAAGCATTGGTCAAGGATACAGGATCAGAAATGGAAAATTCCGATACCGGAATGGATACAAAGGGTTCACTAAAAGAAGTTATAaatgcggcagcaacaacagacgTAAGAGAAGCACCAACTGtagcagaagcaaaaacaaccacTGCCACTGTAAAAACAGATGATTctcccacaacaacaaagacaacagattttacaccaacaacacaacaGTCTGCAGTGTCAACGCTTTTTCCAATACCCACGCCTTTTGACTTTGATCTTGACTTCATTGGCAACGTGGCACACGCCACAACGctcaagaacaacaacgatgatAGCTTCAATGTGGCATCTCTGCCTCCGCCCCTACTGCTAAATGGCAGCGATAAATTGCTGACTGCCGCGCTGGAGCCGTCGCCCGTTAAGGATTTGCGTCCACGTCTGCCCCGTACCCCCATCTATGTGTGCAAGCAATGCAATCAAACGTTCGACGAGCTGGCCAAGCTGTTACAGCACGAGCTGCAGCAACATTCCAGTGGCACGATGTCTACGCCACGCAGCAGCTATCAGCATCAGTGCAAGATCTGTAATGCCTCCTATCGCACTGTGACCCTGCTGAATTATCACATGAAGCGACATGCGCCGGTCAAACTGCCGTGCAAGGCGTTTCAGGTTAGCACGGAATTGGAGCCCGATCGTGTTCAGTCCGATCATCGTGGAAATAGTGGTCCACTCAAGTGTGGCATCGATGGCTGCCGGAAGACCTTCAATTACAAGCATCATTTAAAGCGACATCAGACCGCATCGCATACGCCTGTACAATATATTTGTCCGGAGTGCGGACGAGATATGCTGACCAGTCTGTATCTGAGGAATCACATGTCCATGCACAGGGGCACCCACTCCTACAAGTGCCCCAAGTGCGTGCGTACCTATATGCGCCGTAATCCtTTCCGTAGACATGCGTTGCGGGAGCACAAATGGGAATTGACGGATGCCGAAGTTGATCAAATATATTGTGAAAATGATTTAACTCCATCAATTATATTGCGCGATTTGCGGTGA
- Protein Sequence
- MAHKRLKAADMEINYKFACRCCLKSEAEFFKLDSLIDCGNNDANDNDNDASSTTKLPLLRLLLFCMRTENLPELPQYICVECRKSLQIAYYFIQNGLRAHEILCRKLCPGKLQTKPRINGQHLALRIEAKAGAALLDTHREKPLKCKICGELIHNRLELKHHLRMHSESRHQCKLCNFVPLKHRQLLEHYRKSHGLTTAQIEHQLKIRRSLQAAASTTITKSTTAASTETPAAAAAADDDGQVKVCTMEDMELLIPTVLTPEDFTHPQLDADQLRDIEQQLTSSSLGLGNTTAASTEPVTANASGSNANMSIGAEFLVMPDGSLQQVNDAGVVFEYIDDSKNEASRATTASTTTNVTLESLLSDSKTDLTYDAMDIDLSPMVVDNALPHITVNPKGRPAPASTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCTFYSLRSADLIQHYTSEHNICVSDTKASQVEKSPMLTAMLTDRNRIFSCDMCLFETPSGGQLRLHYSDKHLIVPSEIQLRPSWIRDQQDGNAKLKSGDANTQPDIPLGIKYPTMTQCAAATMATTTAKTTSMVQQPQAITTTTTAVTSTGCINVVVDASSLFFAATAAETVGTTAATTAATTGATATTTTSATATNSSTIAIFPEQCLATTTTAKAAITNQQEASNQAVTTSATTTTNPNTSTFGDMQEFIDNTDVAAICTIPADDMPVDGDDIVIDNNNISLDFDAENLFEEFEDVEVGEEVDDDDAEDDEDEDEDDADNDDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCISCNKKFTSQYKFENHMFLHRGLAPYRCELCTNLYNMKRRLIRHYKTVHKKMPTRDMVQAKGDKVAVPCTAIEKININSDKNPLLMCAKCPFECELDVDMRKHLNAHHGINVGVSMHANEVFIIRKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQALQLTTSSAATTTTVTTTTTLPNNVSDGNKAITNAVVESNNGNIDVDVDLGDGGDGKCEEQALVKDTGSEMENSDTGMDTKGSLKEVINAAATTDVREAPTVAEAKTTTATVKTDDSPTTTKTTDFTPTTQQSAVSTLFPIPTPFDFDLDFIGNVAHATTLKNNNDDSFNVASLPPPLLLNGSDKLLTAALEPSPVKDLRPRLPRTPIYVCKQCNQTFDELAKLLQHELQQHSSGTMSTPRSSYQHQCKICNASYRTVTLLNYHMKRHAPVKLPCKAFQVSTELEPDRVQSDHRGNSGPLKCGIDGCRKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLYLRNHMSMHRGTHSYKCPKCVRTYMRRNPFRRHALREHKWELTDAEVDQIYCENDLTPSIILRDLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557462;
- 90% Identity
- iTF_00518733;
- 80% Identity
- -