Dgau010488.1
Basic Information
- Insect
- Drosophila gaucha
- Gene Symbol
- -
- Assembly
- GCA_035045545.1
- Location
- JAWNOY010000292.1:3253678-3254781[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-19 3.9e-16 58.6 0.0 2 45 174 218 173 218 0.97
Sequence Information
- Coding Sequence
- ATGCCTGCCTGTCAGTCCAACTTgattggcaatggcaacggcggCAATCAAAACAGCGGCGCGAATAGCAGTGCCGGTGTCGGTGCTGCCGGCAGCAATGATCagcgtcaacagcagcagcagcacgaagCCCAGCAGCAGgccacgcagcagcagcaacagcagcacttgcagcagctgcattatcagcagcagcagcagcagcaacaacaaggggCCACGGCTGGTCAGGCATACTCGTCGCAAATCATAACCGTGAATAATCTGGTCAGTGGTTATACAACGGCAGCGCAAAACCTATCACCCACGTCACCCAACGAGTCCAACATGGTGCAGTCTGTGTACAGTCAGGGGCCAACGCCCACGCAGTCGCCTGTGCACTCGGGTGTGGGTGGTGGTGGCGGGAGCAGCGCGGGTGGAAGTGCGAGCAGCGCAGGTGGCGGCGGAAATAGCAGCAGTGGTGGAGGAGGCGGCAGTAGTCAAGTGGTAAAGCGCAAGCGGTCAGTCAACCCACAAGgtgatgaaaattttattcgGGCGCTGGAAGCAGTTCGCACCGGTGGCATCGGGTTCTGCAAGGCTGCTCGGCTGTATGGAGTGAATAATCGAACTCTATGGCTGGAATACAAGAAACGCGGCTACCCAGTGTCGAGACCCAGCATTAAGGCGCGTGTGGTCAAACAGGAGCCTAACCTTTCACCCTCACCAACCCCATCAACAAATCCTGGCGACGATACGACCAACGAAACATATGATCATCTAACAGCAGCTGCCGTGGCCGCAGCTCAAACTGCTGCGCTCAACATGCAGATACCACCGCAGGCGGAGACGCCGACGCCTTCGCTGATGTGCACGCCTCATCATGCCAACGCGGCAGCGGCCAGTACAGCCGGTGGCACTAACACGCATCCAACCATCGGCGTCATGAGCCTCTTTGACGCACGCTACATGGACGCGCCAACGAGCGTACACACCATGTCCCGTCAGCGGTATATCGATGCGACGGGCGCTGGTGCAGCGGCCGCGGCCTCCGGAGCGGGCACGATCAACGTCAATCCGGCCGCTGCCATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MPACQSNLIGNGNGGNQNSGANSSAGVGAAGSNDQRQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQGATAGQAYSSQIITVNNLVSGYTTAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSASSAGGGGNSSSGGGGGSSQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAAQTAALNMQIPPQAETPTPSLMCTPHHANAAAASTAGGTNTHPTIGVMSLFDARYMDAPTSVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527969; iTF_00805889; iTF_00495780; iTF_00513380; iTF_00496518; iTF_00558583; iTF_00566712; iTF_00497305; iTF_00502444; iTF_00551506; iTF_00485782; iTF_00619761; iTF_00606985; iTF_00576984; iTF_00598072; iTF_00616120; iTF_00518363;
- 90% Identity
- iTF_00805889; iTF_00502444; iTF_00551506; iTF_00598072; iTF_00495780;
- 80% Identity
- -