Htri008189.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- -
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000816.1:3704140-3705228[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-19 1.4e-15 57.0 0.0 2 45 169 213 168 213 0.97
Sequence Information
- Coding Sequence
- ATGCCCGCCTGCCAGTCCAACTTGATTGGTAACGGCAACGGCGGCAATCAAAACAGCGCCGCGAATAACAGTGCCGGCGTCGGCGGCGCCGGTACCAACgatcagcggcagcagcaacagcagcacgaTGCCCAGCAGCAGgccacgcagcagcagcatctgcagcagttgcactaccagcagcagcaaccacagggCGCCACGGCTGGTCAAACTTATTCGTCGCAAATTATAACCGTTAATAATCTGGTCAGCGGTTATGCAACGGCAGCACAAAATCTATCACCCACGTCGCCAAATGAATCCAATATGGTTCAGTCCGTGTACAGTCAGGGCCCAACGCCCACACAGTCGCCTGTGCACTCCGGTGtaggtggtggcggtggcagtAGCGCGGGTGGAAGTGCGGGGAGTgctggtggcggcggtggcaatagcagcagcggcggagGTAATGGTAGCAGTCAAGTGGTCAAACGCAAACGGTCGGTAAATCCCCAAGGCGATGAGAATTTTATTCAAGCGTTGGAAGCGGTTCGCACCGGTGGCATTGGATTCTGCAAGGCAGCACGCCTGTATGGAGTCAACAATCGCACACTGTGGCTAGAGTACAAGAAACGTGGCTATCCGGTCTCACGTCCCAGCATTAAAGCGCGCGTCGTCAAACAGGAACCCAATTTATCACCCTCACCAACACCATCCACAAATCCCGGTGATGATACGACCAACGAGACCTATGATCATTTAACTGCAGCTGCCGTTGTCGCGGCCCAAACCGCCGCGCTGAATATGCAGATACCTCCCCAGACGGAGACGCCCACGCCATCGCTGATGTGTACGCCACATCACGCCAGTGCAGCCTCGGCTACCTCAGCCGGCACTACAAATACACATCCGACAATTAATGTGATGAATATCTTCGATGCACGCTATATGGACTCACCCACAAGCGTACACCCGATGTCCAGGCAGCGATATATAGATGCGACGGGTGCTGgagctgccgccgctgcctcGGGAGCTGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAATTTCAACTCAATATAG
- Protein Sequence
- MPACQSNLIGNGNGGNQNSAANNSAGVGGAGTNDQRQQQQQHDAQQQATQQQHLQQLHYQQQQPQGATAGQTYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGNSSSGGGNGSSQVVKRKRSVNPQGDENFIQALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVVAAQTAALNMQIPPQTETPTPSLMCTPHHASAASATSAGTTNTHPTINVMNIFDARYMDSPTSVHPMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512643;
- 90% Identity
- iTF_00512643;
- 80% Identity
- -