Dtan012742.1
Basic Information
- Insect
- Drosophila tanythrix
- Gene Symbol
- -
- Assembly
- GCA_035043275.1
- Location
- JAWNNC010000517.1:18872709-18873824[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-19 4e-16 58.6 0.0 2 45 180 224 179 224 0.97
Sequence Information
- Coding Sequence
- ATGCCCGCCTGCCAGTCCAATTTgattggcaatggcaatggcaacggcaatcAAAACAGCGCCGCGAATAGCAATGCCGGCGTCGGTACCGCCGGCACCACCGCGGACcagcgccaacagcagcagcagcacgaagCTCAGCAGCAggcgacgcagcagcagcaacaacagcatctgcagcagctgcactatcagcagcagcagcaacaacaacagcagcaacagggcGCCACAGCTGGTCAGGCGTACTCGTCGCAAATCATAACCGTAAATAATCTGGTCAGCGGGTATGCAACGGCCGCCCAAAATCTATCGCCCACATCGCCCAATGAGTCCAATATGGTGCAGTCCGTCTATAGTCAGGGTCCGACGCCCACACAATCGCCTGTCCACTCCGGCgtgggcggcggcggcggcagcagtgcGGGTGGAAGTGCGGGCAGTGCtggaggcggcggcggtggcaatAGCAGTagcggcggtggcggcagcagcagtcaagTGACCAAACGCAAGCGATCCGTAAATCCCCAGGGCGATGAGAATTTCATCAGGGCATTGGAAGCGGTGCGCACCGGAGGCATCGGATTCTGCAAGGCAGCTCGCCTCTACGGCGTGAACAATCGCACGCTTTGGCTGGAGTACAAGAAACGCGGCTATCCGGTGTCTAGACCGAGCATTAAGGCGCGCGTCGTCAAACAGGAACCGAATCTATCGCCCTCGCCCACACCATCCACAAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAACCGCTGCAGCCGTTGTCGCAGCACAAACGGCTGCGCTCAACATGCAGATACCGCCGCAGACGGAGACGCCGACGCCATCGCTGATGTGCACGCCGCATCATGCGGGTGCAGGAGCGGCAACCTCTGCCGGTGGGGCCAACACGCATCCGACCATCGGCGTGATGAGCCTCTTCGATGCCCGCTACATGGACTCACCGGCCAGCGTGCACACCATGTCCCGGCAGCGGTATATCGATGGCGCTagtgcggctgctgcagcgtcGGGAGCGGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MPACQSNLIGNGNGNGNQNSAANSNAGVGTAGTTADQRQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQQQGATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGGNSSSGGGGSSSQVTKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVVAAQTAALNMQIPPQTETPTPSLMCTPHHAGAGAATSAGGANTHPTIGVMSLFDARYMDSPASVHTMSRQRYIDGASAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512643;
- 90% Identity
- iTF_00527969;
- 80% Identity
- iTF_00619761;