Basic Information

Gene Symbol
hang
Assembly
GCA_018153365.1
Location
JAECXW010000062.1:7647150-7657881[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.26 20 5.9 1.0 3 23 293 314 292 314 0.93
2 18 0.85 66 4.3 3.1 3 22 422 441 420 441 0.89
3 18 0.00057 0.044 14.3 3.3 1 22 554 575 554 577 0.90
4 18 0.065 5.1 7.8 0.1 2 21 589 608 588 609 0.93
5 18 0.00066 0.051 14.1 0.2 2 23 746 768 745 768 0.95
6 18 0.0019 0.15 12.6 0.1 1 23 776 799 776 799 0.96
7 18 1.5e-05 0.0012 19.2 0.1 2 23 884 905 883 905 0.97
8 18 0.00027 0.021 15.3 2.9 2 23 987 1009 986 1009 0.97
9 18 0.021 1.6 9.3 0.2 2 23 1018 1040 1017 1040 0.95
10 18 0.002 0.16 12.5 0.1 1 23 1053 1076 1053 1076 0.97
11 18 0.00012 0.0092 16.4 1.1 1 23 1136 1158 1136 1158 0.99
12 18 0.0018 0.14 12.7 0.9 1 23 1166 1189 1166 1189 0.96
13 18 7.9 6.1e+02 1.2 0.2 2 13 1197 1208 1197 1210 0.85
14 18 3e-05 0.0023 18.3 1.4 3 23 1308 1328 1307 1328 0.98
15 18 0.0048 0.37 11.4 0.1 1 23 1363 1385 1363 1385 0.97
16 18 0.00056 0.043 14.3 0.6 2 23 1468 1490 1467 1490 0.93
17 18 1.6 1.3e+02 3.4 0.1 2 20 1510 1528 1509 1530 0.91
18 18 0.0062 0.48 11.0 0.4 3 23 1545 1565 1545 1565 0.98

Sequence Information

Coding Sequence
ATGGGAACGGGAATGGGAATGGGAATGGTCCATGGTCCATGGCTGGTGATTATTGCACCTGGTGGCCAGCAGAAAACGAAGGCGGCAGCTGGTGGAATCTGCAGCTGCCACAAGTCTTTCTGCATTATATACCGTGTCCACCATATTACACCTCAGGATCGACTGTCGCTGCAAATTTGCCACGCCTGCATCAGCTACCTGAACTCATGGCAGAGCTTTAAGAACCGCTGCTTCAGCTCCCAGACGAAGCAACGCCAGTGGCTGGAGGCAAACAAGAGCAAGCTCTTCAATTACCTGGACCTGAACATGCCGCCGTTGCCACCGCTGCCATCGCTGCCACCAGTGGCTCCAGGACCCATTGCTCCGCCTGCTGCTGTTGAACTGCTGCCCGGGATGTCTGGTGTGGGGGGAATGGAGAGCTTGCCGCTGTCGCTGCCACTTGATTTCAGCCAAAGCTGCAGCAGCAGCGGTCACGTCCAACAACAGCAGGCTGGCGGTCTGGCCACGACGACGTCCACGTCCAATCCGCCGGGCAACGTTGTTTCCGCCACGACCTCTGGCTCGGCATCTGCATCTGCATCCGCATCCATGTCCACGGCACCGCTGCTAATGCCGCCACTGCCTGCAATCCCCATCAAAGATGAGCCCATTGACACGGATGACGACTACCAAATGAAGTCAATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCGTTGACGGCCTCGGACTACGACTATACGGCGCAGCATGGCGTGAATGCCTCGTCCGCAGCAGCCTCACTGCCGGCGAATGCGGTGGCCAATGTGGCTGCCGCCGGGGACTCCAAAGTGGCCAGCTGCCGGGCCTGCAGTCTGCAATTCTCCACCCGAGCCAACGCCCGTCGCCACGAACGCAATCTGCACCCAAACCTGTTCCAGCTGTCAACGGACTCGCCCCACAATACGCCCATTACGAAGCCAACGCCCGCCCTGGCTGCCGCCTTGGAAATTCAACGGGCGGCAGCGGCGGCGGCCACTGCGGAGGCAAACCGAGCTGCGGGTGCCGCTGGCGGGAATATCTCTACGCAAAAATATCGCCAGGTGGTGATGAACGCCTTCATCAAGTGCGAGGGCGGCGGCTATGACTACGATAATCCCGAACTGTACCAACCGCTGCTCACACGCGACAAGGTGGAGTTCATCGAGCAGAACGACGAGTTCCTCGAGCAATACCAGACGATGACCTGCCGCTGCTGCAGCAAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAAAAGTATCCGCTACTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCGCTGTTCATCTCGCATCTGAAGAAGCGGAACTGCATTAATCTCTTCAGGGTATTGAATGCGCTGCGTGGCAAGACAACGGCCGTGGTTGTAAGCGGTACCGAGGATCTTCCAGCCGAAGGAGCGGCAGAAGCCGTTGCGATTGCCGATGCCGGAGCAGGAGTGGTGGCCATGACCAGTCCCACAGTGACCGCTGGCGGAGATGTCGGCACACCTGGCGCTGGCTCCGAAAGGCCGGAGAAGCTGCGCGCCAAGGAGCTGTTGGTTAACAAGCTGTACGAGTGCAAGCTCTGCCCCAAGGGATTCCGCACCAAGCACGAGTTCCGAACGCATGTGTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCAGCTTCTGCGGGCTGGACTTCGCCGATCCGGTGGACAGGCGGCGGCACTACAACAATATGGATTGCATTGTCCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCATCAGCGATTCCTTGACCACGTCTACCAGGATCACTTGGGCGGCGTGGGTGGCGGGGCGAGCAGTGATAATGCCTCCACCACGGGCAGCGGCATGGCCAGAAGCAACAGCATGGAGCACTCGCCGGGCAAGAGGAGCCTGCTTGGCGCCTTGGGAATTGGTGTCGGCTCCTCGGCGGATGAGTCGCGAAGCAGCAGTGCAGCCCCGCCGCTCACCTCCACACCAAAGCCGGCGGGAGCAGCGCAAGCGGGTAGCGGCGGCTCGTTAAGCGCCTCAGCCTCCGCCTCCGCTCTGAGTTCGGCAAATCGAGATGCGGCTGCACCCAAGTCCCAGTACTTCTCCAGAATGCCGCAGGTATGCCCCATTTGTGGGCAGCAGTACAACAACTACAACAATGTGTTGCGGCACATGGAATCGAAGCATCCGAACAAGCTGCCAGAAACATACAAGTGCGTGCGATGCGGTCTGGGCTATCCCCGGATCTCCTACCTACGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGACACTCCGGCGGCTTTGAGTACATCGTGAATGCGGATGCCGTAAAGTTGGCGGACGGAAGCACGCCGAACGTCTACACGGGTCGCTACGACTACGTGATGAAGGACCTTATGTCGATAACAAATGGTGGGACACTCGATGACGAAGAGGAGGAGCCGGGCAGCGTGGCCAAGAAGATGCGCCTGGACGACAGCAGCAACAACAGCAGTCTGGTGGGCGTGGCCAGCCAGCAAAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCCTGTCCAATCATATGCGCTCCCACTACACGGCATCGAATGCGGTAAATGCGGCTCTAGCGGCTGCCAATCGGATGACGCCGAAATCGCTGACCATTACCGCAACACCAGCACCGGATTCGGAGGTTGAACTTATGGCGGCGTCATCGGTTTCTGCCCCAACAACTCCTGCCAATGTGCCACCGGCAATGGCCAACCAAACGCCCCAGGAGCAGGCCGTTTTTCGACGAAGTCTCGACCAGGCGGCCGATCGTCGCTTCCGGCGGATGCGGTGCCGCATCTGCCAACGGCGTTTTAGCTCGAAGAAGTCATATCGCTACCACATGCTCACCGATCATCAAGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTATGCAACGCAGAGTTTGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGACGGGCGATTAAGGACGAAATGATCATCAAGCAGTTTGAGTGCGAGGTCTGCTCAATTGTCTACAGTTCGGAGCTGGAATTGCAGCAGCACAAGCGCAGCGTGCACAAGCTGGCCTCGGCATCGGCATCCACTTCGGCGTCCACGTCCTCCAAGATTGACGATGAATCGCTGATGGATGAGGCCAAGCCTACCGCATCGGATCTAGCTAATCTCGCCACGCTCGCGGCCGGTGCAGCCGCTGTATCTGCTTCGGGTCAGGGATTGGGCACTCCGCTTTATTGGTACCAGTGCAAGTACTGTCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAACGATTACTCCTGCAAAGACTGCGGCAATGTATACAGCGGACGCAAGAGTCTATGGGTGCATCGCTACAAGAAGCATCCGCAAGTACCCGACCCAGCCGAGTGCTCGCTGTGCCGGAAGGTCTTCTTCGACCGCCAGATGCATGACAACCACACGCCCACCTGCAACCGCAAGCCGATCACCTCGACCGGTGCCCACCAGCAGCAGGAGCCGCAGCTGCAACAGCAGCAGCAGGCGTCACTACAGCCGGGCAGGCGAACCATTTTCCGACACAAGACCGGCGATGATGAGGACGATGAGGAGGACGATGACCAGCAGCAGCAGCTGGAGGATAGGGCCAACAGCGACGGCAACGGGACGACGGCGGGAGTGGCTTCGGGAAGTGCTGTGGTAGCGGCCACATCGATGAAGATACGCATTCCGGAGGTGGCCTGCACCATTTGCGGGGCTCGCTTCACCGACCAGGAGCACTTCAGCAAGCACATCCAGAAGCACGAACAGGAGCTGTACGTGGACAATCCGCTGGCAGCAATGTTCGATGATGGGCCGGCAGATGCCGGGCAGTTCCAGGTGGAGCGACAGAATGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATCGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACACCAACAACAACAACAACAACTCGATGTTGCACCTCCGCGAACTGCATGCGGTGGGTCTGATGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAGCTGAAATGCGAATACTGCGCCTCCACCTTCATAAGCAACAACAATCTGCGTCGCCACATGTACGAGCTGCACAAACACGAGGTGAGCAATCTGCCGGAGCCGCCGATAATCGTTGTGGACGATCACCTCACCTGCCGTCGCTGTCAATTGAAATTCGAGACCAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTAGTGCGACCCTTCTGCCCCTTCCAATGGGGCTGCGATCTGTGCGGGGAGTACCTGTCGCGCAAGGAGAAGCTGATGAACCACATCAACAACCATCTCAAGGAGGAGGTCATAGTGCCAGTGGCCACCAAGTCGGCCATAGAGAGGACAGCGGCCATGGAAGCGGCAGATGCAACAGCAGCAGCAGCGCCACCATTAACATCAGGTGATTCAGCGAAAACAGAAGAGCATTCTCTGGACAAAGATCAGGTGGCAGCAGCAGCATCATCAACATCAGAGAAGTTGGAGATTCGGGACGAAGAAGACAGCGATGAACTGGACGAGGAGGACAGCTCCGGCGAAGAGGAGGAGAGTTCAGGCACGGGTGATGATGAGGACGACGACACCGACGATGAGGACGGCGAGGGAGAAGATGATGATGAAGAGGGAGACGGGGGTGAAGGCGAAGACGAAGAGGGTGTCCAGCCACCGGGACAACTGTTGCCACAGAAGCAACACAAAGGGAGTCTTAACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAGCCGGAGCCAGTGGCATTGCCGGTGCGACCACTGATGAATGGCAAGTCCAAGATGCCGCCGTTGATCGTGGCCAGCTCTGACGATGAGGACGATGATGTGATGCCCATAGAGGACATCATTGAGGAGGAATATGATGAGGATGCCGATCCGGATCCTGATCCGGAGGATGCCATCGAGGAGGTTGATGACGATGATTTAGATGAGGGGGATGTAGAGGACGAGCCGAATGTGGTGTCGACGGCCTCCTCGTCGGAGAGCGAGTCCACCACAACGACCACGTCCAATTCGCATTCGCGTTCCACGGGTGAGCGGCGTAAGAAGGCCGACGATCAGTTGAATGATCCCGGCTTTACCTGTGTTCTATGTCAACTTTGTTTCGATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATAACAACAATAAGAGTAAGACTGTTGCTGCCACGGCGACAACTGCAACAGCTGCAACAAATTGA
Protein Sequence
MGTGMGMGMVHGPWLVIIAPGGQQKTKAAAGGICSCHKSFCIIYRVHHITPQDRLSLQICHACISYLNSWQSFKNRCFSSQTKQRQWLEANKSKLFNYLDLNMPPLPPLPSLPPVAPGPIAPPAAVELLPGMSGVGGMESLPLSLPLDFSQSCSSSGHVQQQQAGGLATTTSTSNPPGNVVSATTSGSASASASASMSTAPLLMPPLPAIPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPELYQPLLTRDKVEFIEQNDEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPXXXXXXXXXXXXXXALFISHLKKRNCINLFRVLNALRGKTTAVVVSGTEDLPAEGAAEAVAIADAGAGVVAMTSPTVTAGGDVGTPGAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGASSDNASTTGSGMARSNSMEHSPGKRSLLGALGIGVGSSADESRSSSAAPPLTSTPKPAGAAQAGSGGSLSASASASALSSANRDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAPDSEVELMAASSVSAPTTPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLASASASTSASTSSKIDDESLMDEAKPTASDLANLATLAAGAAAVSASGQGLGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQQQEPQLQQQQQASLQPGRRTIFRHKTGDDEDDEEDDDQQQQLEDRANSDGNGTTAGVASGSAVVAATSMKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTNNNNNNSMLHLRELHAVGLMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPIIVVDDHLTCRRCQLKFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKSAIERTAAMEAADATAAAAPPLTSGDSAKTEEHSLDKDQVAAAASSTSEKLEIRDEEDSDELDEEDSSGEEEESSGTGDDEDDDTDDEDGEGEDDDEEGDGGEGEDEEGVQPPGQLLPQKQHKGSLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPEPVALPVRPLMNGKSKMPPLIVASSDDEDDDVMPIEDIIEEEYDEDADPDPDPEDAIEEVDDDDLDEGDVEDEPNVVSTASSSESESTTTTTSNSHSRSTGERRKKADDQLNDPGFTCVLCQLCFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNNKSKTVAATATTATAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00486721;
90% Identity
iTF_00494536;
80% Identity
-