Dcar007408.1
Basic Information
- Insect
- Drosophila carrolli
- Gene Symbol
- hang
- Assembly
- GCA_018152295.1
- Location
- JAECXJ010000002.1:15101238-15111572[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.26 20 5.9 1.0 3 23 277 298 276 298 0.93 2 18 0.85 64 4.3 3.1 3 22 406 425 404 425 0.89 3 18 0.00057 0.043 14.3 3.3 1 22 538 559 538 561 0.90 4 18 0.065 4.9 7.8 0.1 2 21 573 592 572 593 0.93 5 18 0.00066 0.05 14.1 0.2 2 23 728 750 727 750 0.95 6 18 0.0019 0.14 12.6 0.1 1 23 758 781 758 781 0.96 7 18 1.5e-05 0.0012 19.2 0.1 2 23 866 887 865 887 0.97 8 18 0.00027 0.02 15.3 2.9 2 23 969 991 968 991 0.97 9 18 0.021 1.6 9.3 0.2 2 23 1000 1022 999 1022 0.95 10 18 0.002 0.15 12.5 0.1 1 23 1035 1058 1035 1058 0.97 11 18 0.00012 0.0089 16.4 1.1 1 23 1118 1140 1118 1140 0.99 12 18 0.0018 0.14 12.7 0.9 1 23 1148 1171 1148 1171 0.96 13 18 7.9 6e+02 1.2 0.2 2 13 1179 1190 1179 1192 0.85 14 18 3e-05 0.0023 18.3 1.4 3 23 1288 1308 1287 1308 0.98 15 18 0.0048 0.36 11.4 0.1 1 23 1343 1365 1343 1365 0.97 16 18 0.00056 0.042 14.3 0.6 2 23 1446 1468 1445 1468 0.93 17 18 1.6 1.2e+02 3.4 0.1 2 20 1488 1506 1487 1508 0.91 18 18 0.0062 0.47 11.0 0.4 3 23 1523 1543 1523 1543 0.98
Sequence Information
- Coding Sequence
- ATGGTGTTCCAATGTTGTCACATTAAAGTGCAATCCGCGGGACTGGGCAATCCTTCTATCCTGTATCCAATTGCACAGGGAAACATGGCGGCCATAAAGGAAACGCTGGTTTGGATTACACCTCAGGATCGACTGTCGCTGCAAATTTGCCACGCCTGCATCAGCTACCTGAACTCATGGCAGAGCTTTAAGAACCGCTGCTTCAGCTCCCAGACGAAGCAACGCCAGTGGCTGGAGGCCAACAAGAGCAAGCTCTTCAACTACCTGGACCTGAACATGCCTCCGTTGCCACCGCTGCCATCGCTGCCACCAGTGGCTCCAGGACCCATTGCTCCACCTGCTGCTGTTGAACTGCTGCCCGGGATGTCTGGTGTGGGCGGAATGGAGAGCTTGCCGCTGTCGCTGCCACTTGATTTCAGCCAAAGCTGCAGCAGCAGCGGTCACGTCCAACAACAGCAGGCTGGCGGTCTGGCCACGACGACGTCCACGTCCAATCCGCCGGGCAACGTTGTTTCCGCCACGACCTCTGGCACGGCATCTGCATCCACGGCACCGCTGCTAATGCCGCCACTGCCTGCAATCCCCATCAAAGATGAGCCCATTGACACGGATGACGACTACCAAATGAAGTCAATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCGTTGACGGCCTCGGACTACGACTATACGGCGCAGCATGGCGTGAATGCCTCGTCCGCAGCAGCCTCGCTGCCGGCGAATGCGGTGGCCAATGTGGCAGCCGCCGGGGACTCCAAGGTGGCCAGCTGCCGGGCCTGCAGTCTGCAGTTCTCCACCCGGGCCAACGCCCGTCGCCACGAACGAAATCTGCACCCGAACCTGTTCCAGCTTTCCACAGACTCGCCCCACAACACGCCCATTACGAAGCCAACGCCCGCCCTGGCTGCCGCCTTGGAAATCCAACGGGCGGCAGCGGCGGCGGCCACCGCGGAGGCAAACCGAGCTGCGGGTGCCGCTGGCGGAAATATCTCTACCCAAAAATACCGTCAGGTGGTGATGAACGCCTTCATCAAGTGCGAGGGCGGCGGGTATGACTACGATAATCCCGAACTGTACCAGCCTCTGCTCACACGCGACAAGGTGGAGTTCATCGAGCAGAACGACGAGTTCCTCGAGCAATACCAGACGATGACCTGCCGCTGCTGCAGCAAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCGCTGTTCATTTCGCATCTGAAGAAGCGGAACTGCATTAATCTCTTCAGGGTTTTGAATGCGCTGCGTGGCAAGACAACTGCTGTGGTTGTAAGCACTGCCGAGGATCTGCCAGCCGAAGGAGCGGCAGAAGCCGTTGCGATTGCCGATGCCGGAGCAGGAGTGGTGGCCATGACCAGTCCAACAGTGACCGCCGGCGGAGATGGCGGCACACCCGGCGCTGGCTCCGAAAGACCGGAGAAGCTGCGCGCCAAGGAGCTGCTGGTTAACAAGCTGTACGAGTGCAAGCTCTGCCCCAAGGGATTCCGCACAAAGCACGAGTTCCGAACGCACGTGTATGACAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCAGCTTCTGCGGACTGGACTTCGCCGATCCGGTGGACAGGCGACGGCACTACAATAACATGGATTGTATTGTCCGGCTGCGTTGCATGACGTGCGATGCCAAGCTAGAGACGCACCAGCGATTCCTCGACCACGTCTACCAGGATCACTTGGGCGGCGTGGGTGGCGGGGCGAGCAGTGATAATGCCTCCACCACGGGCAGCGGCATGGCCAGAAGCAACAGCATGGAGCACTCGCCGGGCAAGAGGAGCCTGCTCGGCGCCTTGGGCATTGGTGTCGGCTCCTCGGCGGATGAGTCGCGAAGCAGCAGTGCGGCCCCGCCGCTGACCTCCACACCAAAGTTGGCGGGAGCAGCGCAAGCGGGTGGCGGCGGCTCCTTAAGCGCCTCAGCCTCCGCTCTGAGCTCGGCAAATCGAGATGCGGCTGCACCCAAGTCCCAATACTTCTCCAGAATGCCGCAGGTATGCCCTATTTGCGGCCAGCAGTACAACAACTACAACAATGTTCTGCGGCACATGGAATCGAAGCATCCGAACAAGCTGCCAGAGACATACAAGTGCGTGCGATGCGGACTAGGCTATCCCCGGATCTCCTACCTACGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGGCACTCCGGCGGCTTCGAGTACATCGTGAATGCTGATGCCGTAAAGTTGGCGGACGGAAGCACGCCGAATGTCTACACGGGTCGCTACGACTACGTGATGAAGGACCTTATGTCGATAACAAATGGTGGGACACTCGATGACGAAGAGGAGGAGCCGGGCAGCGTGGCCAAGAAGATGCGCCTGGACGACAGCAGCAACAACAGTAGCCTGGTGGGCGTGGCCAGTCAGCAGAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCCTGTCCAATCATATGCGCTCCCACTACACGGCCTCGAATGCGGTAAATGCGGCTCTAGCGGCTGCCAATCGGATGACGCCGAAATCGCTGACCATTACCGCAACACCAGCAGCGGATTCGGAGGTTGAACTTTTGGCGGCGTCATCGGTTTCTGCCCCAACAACTCCTGCCAATGTGCCGCCGGCAATGGCTAACCAAACGCCCCAGGAGCAGGCCGTTTTTCGACGAAGTCTCGACCAGGCGGCCGATCGTCGCTTCCGGCGGATGCGGTGCCGCATCTGCCAGCGGCGATTCAGCTCGAAGAAGTCATATCGCTACCACATGCTCACCGATCATCAAGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTATGCAACGCCGAGTTTGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAAGTGCACGGACGGGCGATAAAGGACGAAATGATCATCAAGCAGTTTGAGTGCGAGGTCTGTTCAATTGTCTACAGTTCGGAGCTGGAGCTGCAGCAGCACAAGCGCAGCGTCCACAAGTTGACCTCGGCATCGGCATCCACTTCGGCGTCCACGTCCTCCAAGATTGACGATGACTCGCTGATGGACGAGGCCAAGCCTACCGCATCGGATCTGGCTAATCTCGCCACGCTCGCGGCCGGTGCAGCCGCTGCATCTGCTTCGGGTCAGGGATTGGGCACTCCGCTGTACTGGTACCAGTGCAAATACTGTCCATCGAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAACGATTACTCCTGCAAAGATTGCGGCAATGTATACAGCGGACGCAAGAGTCTATGGGTGCATCGCTACAAGAAGCATCCGCAAGTACCCGACCCAGCCGAGTGCTCGCTGTGCCGGAAGGTCTTCTTCGACCGCCAGATGCATGACAACCACACGCCCACCTGCAACCGCAAGCCGATCACCTCGACCGGTGCCCACCAGCAGCAGGAACCACAGCTGCAACAGCAGCAGGCGTCGCTACAGCCGGCCAGACGAACCATTTTCCGACACAAGACCGGCGATGATGAAGACGAGGAGGAGGACGATGACCAGCAGCAGCTGGAGGATAGGGCCAACAGCGACGGCAACGGGACGACGGCAGGAGTGGCTTCGGGGAGTGCTGTGGTCGCGGCCACGTCGATGAAGATACGCATTCCGGAGGTGGCCTGCACCATTTGCGGGGCTCGCTTCACCGACCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAGCAGGAGCTGTACGTGGACAATCCGCTGGCAGCGATGTTCGATGATGGGCCGGCGGATGCCGGGCAGTTCCAGGTGGAGCGACAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATCGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACACCAACAACAACAACAACAACTCGATGTTGCACCTCCGCGAGCTGCATGCGGTGGGTCTGATGCCCAACCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAGCTGAAATGCGAATACTGCGCCTCCACCTTCATCAGCAACAACAATCTGCGTCGCCACATGTACGAGCTGCACAAGCACGAGGTGAGCAATCTGCCGGAGCCGCCAATAATCGTTGTGGACGATCACCTCACCTGCCGTCGCTGCCAATTGAAATTCGAGACCAAGGAGCTGTGGATCGAGCACAAACTGGCCGATGCGAAGGTGGTGCGACCCTTCTGCCCCTTCCAATGGGGCTGCGATCTGTGCGGCGAGTACCTGTCGCGCAAGGAGAAGCTGATGAACCACATCAACAACCATCTCAAGGAGGAGGTCATAGTGCCAGTGGCCACCAAGGCGGCCATAGAGAGGACAGCGGCCATGGAAGCGACAGATGCAACAGCAGCAGCAGCGCCACCGTTAACATCAGGTGATTCAGCAAAAACAGAAGAGCATTCTCTGGACAGAGGTCAGGTGGCAGCAGCATCATCAACATCAGAGAAGTTGGAGATTCGCGAGGAAGAAGACAGCGATGAACTGGACGAGGAGGACAGCTCGGGCGAAGAGGAGGAGAGTTCAGGCACGGGTGATGATGAGGATGACGACACCGACGATGAGGACGGCGAGGGAGAAGATGAGGACGAGGAGGGCGACGGGGGTGAAGGCGAAGACGAAGAGGGAGTGCAGCCACCGGGACAACTGTTGCCACAGAAGCAACACAAAGGGAGTCTAAACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAACCGGAGCCAGTGGCATTGCCGGTACGACCGCTGATGAATGGCAAGTCCAAGATGCCGCCGCTGATCGTGGCCAGCTCTGACGATGAAGACGATGGTGTGATGCCCATAGAGGACATCATCGAGGAGGAGTATGATGAGGATGCCGATCCGGATCCCGATCCGGAGGATGCCATCGAGGAGGTTGACGATGATGATTTAGATGAGGGGGATGTGGAGGACGAGCCGAATGTGGTGTCGACGGCCTCCTCCTCGGAGAGCGAGTCCACCACAACGACCACGTCCAATTCGCATTCGGGTTCCACGGGTGAGCGGCGTAAGAAGGCCGACGATCAGTTGAATGATCCCGGCTTTACCTGTGTTCTATGTCAACTTTGTTTCGATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTGA
- Protein Sequence
- MVFQCCHIKVQSAGLGNPSILYPIAQGNMAAIKETLVWITPQDRLSLQICHACISYLNSWQSFKNRCFSSQTKQRQWLEANKSKLFNYLDLNMPPLPPLPSLPPVAPGPIAPPAAVELLPGMSGVGGMESLPLSLPLDFSQSCSSSGHVQQQQAGGLATTTSTSNPPGNVVSATTSGTASASTAPLLMPPLPAIPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPELYQPLLTRDKVEFIEQNDEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPXXXXXXXXXXXXXXALFISHLKKRNCINLFRVLNALRGKTTAVVVSTAEDLPAEGAAEAVAIADAGAGVVAMTSPTVTAGGDGGTPGAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGASSDNASTTGSGMARSNSMEHSPGKRSLLGALGIGVGSSADESRSSSAAPPLTSTPKLAGAAQAGGGGSLSASASALSSANRDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAADSEVELLAASSVSAPTTPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLTSASASTSASTSSKIDDDSLMDEAKPTASDLANLATLAAGAAAASASGQGLGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQQQEPQLQQQQASLQPARRTIFRHKTGDDEDEEEDDDQQQLEDRANSDGNGTTAGVASGSAVVAATSMKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTNNNNNNSMLHLRELHAVGLMPNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPIIVVDDHLTCRRCQLKFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIERTAAMEATDATAAAAPPLTSGDSAKTEEHSLDRGQVAAASSTSEKLEIREEEDSDELDEEDSSGEEEESSGTGDDEDDDTDDEDGEGEDEDEEGDGGEGEDEEGVQPPGQLLPQKQHKGSLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPEPVALPVRPLMNGKSKMPPLIVASSDDEDDGVMPIEDIIEEEYDEDADPDPDPEDAIEEVDDDDLDEGDVEDEPNVVSTASSSESESTTTTTSNSHSGSTGERRKKADDQLNDPGFTCVLCQLCFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605750;
- 90% Identity
- iTF_00588292; iTF_00512163; iTF_00529707;
- 80% Identity
- -