Dfun009401.1
Basic Information
- Insect
- Drosophila fungiperda
- Gene Symbol
- -
- Assembly
- GCA_035042345.1
- Location
- JAWNLM010000172.1:147365-152323[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00013 0.0088 16.4 1.3 1 23 404 426 404 426 0.98 2 12 5 3.4e+02 1.9 0.8 1 23 432 455 432 455 0.89 3 12 8.7 6e+02 1.2 0.3 1 23 484 507 484 507 0.89 4 12 0.0039 0.27 11.7 2.1 5 23 789 807 786 807 0.92 5 12 0.045 3.1 8.4 1.4 1 23 813 836 813 836 0.98 6 12 6.8 4.7e+02 1.5 1.0 2 19 876 894 872 896 0.55 7 12 0.0039 0.27 11.7 0.8 1 23 916 939 916 939 0.97 8 12 0.011 0.74 10.3 0.4 1 23 1137 1160 1137 1160 0.92 9 12 0.00032 0.022 15.1 3.0 1 23 1174 1196 1174 1196 0.98 10 12 0.0015 0.1 13.1 4.0 2 23 1228 1252 1227 1252 0.90 11 12 0.041 2.8 8.5 0.6 1 23 1257 1279 1257 1279 0.97 12 12 0.0011 0.073 13.5 1.4 1 23 1285 1308 1285 1308 0.96
Sequence Information
- Coding Sequence
- ATGGCGCATAAACGTTTGAAAACAGCGGACATGGAAGTTAATTACAAATTCGCATGTCGCTGTTGCCTCAAATCGGAGGCGGAATTCTTCAAGCTGGACTCTCTCATCGACTGTGGCAACGTTGATGCTAATGACAATGACGATGATGCCTCGtcgcaaaaaaaattgcccCTGTGGCGTTTACTGCTCTTCTGCATGCGCACCGAAAATCTTCCCGAGCTGCCGCAATACATTTGCGTGGAATGCCGAAAAAGTTTACAAATTGCCTACTATTTCATACAGAACAGTTTGCGTGCCCATGAAATATTGTGTCGCAAACTGTGCCCGGGCAAGCTACAAACCAAACCGCGCATCAACGGACAACACTTAGCCCTAAGGATCGAGGCAAAAGCTGGCGGAGCGTTGCTGGAAACGCAAAGGGAGAAACCcctaaaatgcaaaacattcGGTGATATTATACCTAATCGCTTGGAGCTCAAACATCATCTAGGATTGCATTCAGAGTCTCGACAAATGTGTAAATTGTGTAATTTCGTAACGCTTAAGCATCGCCAGCTGCTGGAGCACTATCGCAAATCGCATGGCTTGACAACGGCCCAAATTGAGCATCAGTTAAAAATAAGTAGATCGCTGCAGGCGGCTGCCAATTTATCAACAACCACAAAGGCGACAGCAGCTGCATCCACAGAAACGCCTGTTGCTGCGGATGATGATGGTCAGGTGAAAGTGTGCACAATAGAGGACATGGAGCTACTGATACCCACTGTGTTGACACCCGAGGATTTCATGCATCCACGACTGGATGCGGATCAATTGCGTGACATTGAACAGCAATTGACGAGTAGCTCGCTGGGCTTGCACAACACCACAGCTGCATTTACGGAACCAGTTTCGGCAAATGTCACCGGAAACAGTGCCAATATGAGCATAGGTGCGGAGTTTCTGGTTATGCCCGATGGCTCGTTGCAGCAGGTTAATGATGCTGGCGTTGTCTTCGAATATATTGATGATAGTACAAATGCggcaaaaccaacaacatcCACATCGACCAATGTGACTTTGGAGAGCCTGTTGAGTGACTCGAAAACAGATTTAACCTATGATCCAATGGCTATTGATCTGAGTCTTATGGTTGTCGATAATCCACTGCCACAGATAACAGTCAAGCCCATGGTGCGACCAGCGCCATTGTCAACTGGTGCCCtgaaacacaaatgcaaactgTGCCCCAAAGCATTTCCGACGGTTGCACGCCTCAAATCTCACCAGCTAACGCATAGCCATTTACCTAAATTCTATTGCGATCAGTGCACATATTATTCGCTTCGCAGCGCCGATCTCATTCAGCATTATACAAACGAGCATAATATGTCCGTCAGCGATGGAAAAGCTAATCAAGTGGAGAAGTCACCAATGCTTACGGCAATGTTAACGGATCGCAATCGCATCTTTTCCTGCGATATGTGTCTATTTGAGACGCCCAGCGGAGGTCAGCTGCGCTTGCATTACAGTGATAAACATCTAATTGTACCCAGTGAGATACAACTGCGTCCTAGCTGGATCAGGGATCAGCAGGATGGATATGCGAAAGTGAAAAGTGGCGACGGCAACCCACAACCAGACATTCCGCTGGGTATTAAATATCCAACCATGACGCAGTCTGAAACAGCTGCAACGGAAACAACAAACATGGTGCAACAGCCGcaggcaataacaacaacaactacggcTGTGAATTCGACGGGTGGCAtaaatgttgttgtggatGCCACTTCATTATTCtatgcagcaactgctgcggaaaatgtagcagcaacaggtgcaacagcaacaacaacaacgggcGGAACAGCAACAGATTCAAGCTCAATTACAATATTTCCAGAGCAGTGCctgtcaacaacaaaaacaacaacagcaaaggtTTCGACAACAAATCAACAGGAGGCAAGCAGTCAGGCactgacagcaacaacaacaccaacaaattCCAATACTAGCACATTTGGTGATATGCAGGAGTTTATAGATAATACAGATGTGGCTGCTATATGCACAATACCCGCCGACGATATGCCTGTGGATGGCGATGATATCGTCATCGATAATAACAACATTAGTCTGGATTTTGATGCTGAAAATCTATTTGAGGAATTTGAAGATGTCGAAGTTGGCGAAGAGGTTGACGATGAGGACGCTGACGAGGAtgacgaggatgaggatgaggatgatgcGGACAATGATGATGAGAATGATAACAATAATGCGGCTGCCGATCAAAATATCTTGCTAACcagcgacgatgacgatgtgGATGACTTTGACGACGAACAATCGAAGCATCTGCAGAAACCCtattgcatattttgcaacaaaaagtttACCAGTCAATACAAGTTCGAAAATCACATGTTTGTGCATCGCGGTTTGGCCCCCTACCGCTGTGAGCTGTGTACCAATCTGTACAATATGAAACGCCTGCTCATACGACACTATAAAACAGTTCATAAAAAGATGCCCACGAGAGACATGGTGCAGGCCAAGGGCGACAAGGTTGCCGTGCCGTGTATGCATATCGAAAAGATTAATATAAACGCGGGCAGAAatccTTTACTGATGTGCGCCAAGTGTCCATTTGAATGTGAGCTGGATGTGGATATGCGCAAGCACTTAAATGCCCATCATGGCATCAACGATGGCGTTTCCATGCATGCCAACGAGGTGTTTATTATACGCAAACTGCCTTTTGAGTGTCCACGCTGTATTCGTTCATTTGCGGCAAAGCGAACGTTGACACGCCACTTGCAGCGTAGCCATTTGGTGGATACAATCATTGAGATGCAGGCGCTGCAATTGACACCCAGTTTGGAGGCAACGACAACCACCACTTTACCGAACAATGCCAGCGATAGCAGTAAAGCCACAGCACATGCGGTTAACAAGTCGTCAAAAAATATCGATGGCGATGGTAGCGATGAAAAATGCGATGATCAAGTGCTTGACAAGGATGCAGGATCAGAAATGGAAAATTCCGATACAGAAGTGGATATAAAAGGCGCAATAAAAGATGTTACAAAGGCGACAGTAACAACAGACGTAAGAGAGGGAACAACTgtagcagaaacaacaaaaaaaacggcCATTACGAAAAAAGATGCTTCggccataaaaacaaacacaacagaTTTTACACCAACACAACAGTCAGCAATCCCAACACTTTTTCCAACGCCCACGTCCTTTGACTTTGATCTGGACTTCATtggcaagaacaacaacgatgaTAGCTTCAATGTGGCATCTCTGCCTCCGCCTCTACTGCTAAATGGCAGCGATAAGTTGCTGACTGCCGCTCTGGAGCTGTCGCCCGTTAAGGATTTGCGTTCACGTCTGCCCCGTACCCCAATTTATGTGTGCAAGCAATGCAATCAAACATTCGACGAGCTAGCCAAGCTGTTGCAGCACGAGCTGCAGCAACATTCCAGTGGCACAATATCATCGCCACGCAGCAGCCATCAGCATCAGTGCAAGATCTGTAATGCCTCCTATCGCACTGTGACCCTGCTCAATTATCACATGAAGCGACATACGCCGGTCAAAGTTCCCTGCAAGGAGTTTCAGGTTAGCGCGGAGTTGGAGCAGCATGTACCGTCCGATCATCGTGACAATAGTAGCCCACTCAAATGTGGCATCGATGGGTgtagaaaaacatttaattacaagCATCATTTAAAGCGACATCAGACCGCATCGCACACGcctgtgaaatatatttgtccAGTGTGCGGAAGAGATTTGCTGACCAGCCTGTGTTTAAGGAATCACATGTCTATGCACCGGGGCACCCACTCCTATAAGTGCCCCAAGTGCGTGCGTACCTATATGCGGCGTAATGCTTTCCGTCGACATGCGTTGCGGGAGCACAAATGGGAATTGACGGATGcggaaatggaaaatatatattgtgaaaaTGATTCAACGCCGTCAACAATATTGCGCGATTTACGGTGA
- Protein Sequence
- MAHKRLKTADMEVNYKFACRCCLKSEAEFFKLDSLIDCGNVDANDNDDDASSQKKLPLWRLLLFCMRTENLPELPQYICVECRKSLQIAYYFIQNSLRAHEILCRKLCPGKLQTKPRINGQHLALRIEAKAGGALLETQREKPLKCKTFGDIIPNRLELKHHLGLHSESRQMCKLCNFVTLKHRQLLEHYRKSHGLTTAQIEHQLKISRSLQAAANLSTTTKATAAASTETPVAADDDGQVKVCTIEDMELLIPTVLTPEDFMHPRLDADQLRDIEQQLTSSSLGLHNTTAAFTEPVSANVTGNSANMSIGAEFLVMPDGSLQQVNDAGVVFEYIDDSTNAAKPTTSTSTNVTLESLLSDSKTDLTYDPMAIDLSLMVVDNPLPQITVKPMVRPAPLSTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCTYYSLRSADLIQHYTNEHNMSVSDGKANQVEKSPMLTAMLTDRNRIFSCDMCLFETPSGGQLRLHYSDKHLIVPSEIQLRPSWIRDQQDGYAKVKSGDGNPQPDIPLGIKYPTMTQSETAATETTNMVQQPQAITTTTTAVNSTGGINVVVDATSLFYAATAAENVAATGATATTTTGGTATDSSSITIFPEQCLSTTKTTTAKVSTTNQQEASSQALTATTTPTNSNTSTFGDMQEFIDNTDVAAICTIPADDMPVDGDDIVIDNNNISLDFDAENLFEEFEDVEVGEEVDDEDADEDDEDEDEDDADNDDENDNNNAAADQNILLTSDDDDVDDFDDEQSKHLQKPYCIFCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKKMPTRDMVQAKGDKVAVPCMHIEKININAGRNPLLMCAKCPFECELDVDMRKHLNAHHGINDGVSMHANEVFIIRKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQALQLTPSLEATTTTTLPNNASDSSKATAHAVNKSSKNIDGDGSDEKCDDQVLDKDAGSEMENSDTEVDIKGAIKDVTKATVTTDVREGTTVAETTKKTAITKKDASAIKTNTTDFTPTQQSAIPTLFPTPTSFDFDLDFIGKNNNDDSFNVASLPPPLLLNGSDKLLTAALELSPVKDLRSRLPRTPIYVCKQCNQTFDELAKLLQHELQQHSSGTISSPRSSHQHQCKICNASYRTVTLLNYHMKRHTPVKVPCKEFQVSAELEQHVPSDHRDNSSPLKCGIDGCRKTFNYKHHLKRHQTASHTPVKYICPVCGRDLLTSLCLRNHMSMHRGTHSYKCPKCVRTYMRRNAFRRHALREHKWELTDAEMENIYCENDSTPSTILRDLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557462;
- 90% Identity
- iTF_00499196;
- 80% Identity
- -