Dful014036.1
Basic Information
- Insect
- Drosophila fulvimacula
- Gene Symbol
- -
- Assembly
- GCA_035045555.1
- Location
- JAWNOX010000203.1:8141267-8142853[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-16 2.1e-13 49.7 0.0 2 45 360 403 359 403 0.95 2 3 0.06 1e+02 2.8 0.0 28 37 433 442 432 447 0.90 3 3 5.5e-18 9.1e-15 54.1 0.0 2 41 469 508 468 510 0.96
Sequence Information
- Coding Sequence
- ATGGGCCACTCGTCCACAATAATGGATATACAGCGCGTTCTGCTGCATCAACAAAGCAACAATCAGCAATGCGAAGTATTGCTTGTGGCCAAAGACGGCATCAGTGTACGCGCTCATCTCTTCGTCCTGAGCACTTGCAGCGATCTAATGCGCAATCTGCTTGTCGATTTACCCGCCGGTCAGGAGGCGACCATCATTTTGCCAGACATCCGCGGTGAGCTGCTAGAGAATGTGTTATCGTTTATATACATGGGGGAAACTAGTTTGACCTCTGCCATGCTGCCCGAATTTCTCGGAGCCATCAATTTGCTGGGCATCAAATCGGCTATAAGCTTTGATACCAATCCCACATCCATGACGACCACAAACGTTATAAGTGGCGCCATGGCTGTTGAGGAAGCCAAATCTATAAGCGGCTTACACATTGCGAACACTGCTCTtatggaggaggaggaagaagaagatgcggGAGCTGTAGTTGGTAAACTGGAAGTGGATAATGCCGTACTCACAAATCCTCAACAGCAGCACGAGCAGGAAGGCCGAACCCTGGAATTCCTGGATGTGTACGGCGATCAGCCAAAAATCACATATTCCATCGAACACATGGGCGGCACAACCAGCGGAAatcagtatatatacacagagaATACGGGAACATTTACTATAACACAATCATCAGTGGCAAAGTTGGGAGTGCAAGGCAGCACAGCTGTGGTGGACTCTGTGGAGACAGCTGAGCTAGGCGACGAGGATGTCGAGGCAGAAGTAACAGACGAGCACGAAGAATCCGAGTCACAGTTAATCGAGGAGGAATATGTTGGATCGGCAGATCCTTTAATAGAGATGAGCGGAGAGGCGGATGTTGATATGCATGAAGATGGAATGCACGATGGGGACGAAGACGAGGATGATGAACTATTGGATGTGAAACCTCGCAAGTCTCATCTCGATATGAAAATGCTAAAATCCAAGGCACGCCAGCGTCAGCCACCATCATTAAAGGCAACGAAGAAAGCAATGACcaaacagcaccaacaacacgCAGCACTTAAAAAGGAATGTAAGGACGATATCAATGATGCTCTCGACctcgcagcagctgccgtaCTTCACGAAGGCCTCAGCCTGCAAAAAGCTGCTGATCGCTATGACATATCGAAGACCGTGCTTTGGCGACGTGTGCGTTCTAATCCAGCCTACATGCGGATAAAGCGAGAGAAGCCTTCACTTTCGGAAGCGTATGAACGCCTGAAGAACGGCGATTCGTTGAAAAGCATAAGTCAGGACTTGCATATACCCATGTCGACGCTGCATCGGCACAAGGTGCGTCTTGCGGCACAGGGTCGCTTGCCCGACTTCGTTGCTTGCCGGCGGCGTGACAGCACCCCAAAGGATGAGCTGCGTGAGAAGCTAGCAAAGGCAGTCCATGCCTGCATCAACGATGGCATGACCCAGAATCATGCAGCTAATCTCTTTGAAATACCTAAGAGCACGCTCTGGCGGCACTTGCAACGGCGAGTGAACGAGGCTGAGCGTAAAGTCAAggaagaacatgaagaagaggatgatgatgttatgcattaa
- Protein Sequence
- MGHSSTIMDIQRVLLHQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPAGQEATIILPDIRGELLENVLSFIYMGETSLTSAMLPEFLGAINLLGIKSAISFDTNPTSMTTTNVISGAMAVEEAKSISGLHIANTALMEEEEEEDAGAVVGKLEVDNAVLTNPQQQHEQEGRTLEFLDVYGDQPKITYSIEHMGGTTSGNQYIYTENTGTFTITQSSVAKLGVQGSTAVVDSVETAELGDEDVEAEVTDEHEESESQLIEEEYVGSADPLIEMSGEADVDMHEDGMHDGDEDEDDELLDVKPRKSHLDMKMLKSKARQRQPPSLKATKKAMTKQHQQHAALKKECKDDINDALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELREKLAKAVHACINDGMTQNHAANLFEIPKSTLWRHLQRRVNEAERKVKEEHEEEDDDVMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00546570;
- 80% Identity
- iTF_00509920;