Basic Information

Insect: Drosophila formosana
Gene Symbol: -
Assembly: GCA_035045625.1
Location: JAWNOW010000272.1:9569030-9575540[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.064 4.2 8.0 0.2 1 23 1343 1366 1343 1366 0.94

2 13 8.2 5.3e+02 1.4 0.2 1 23 1529 1551 1529 1551 0.91

3 13 0.00018 0.012 16.0 2.7 2 23 1554 1575 1554 1575 0.97

4 13 7e-05 0.0045 17.3 0.2 3 23 1583 1603 1581 1603 0.98

5 13 5.8e-07 3.8e-05 23.9 4.1 2 23 1610 1631 1609 1631 0.97

6 13 5.5 3.6e+02 1.9 0.4 5 23 1644 1662 1642 1662 0.96

7 13 1.4 89 3.8 5.4 3 23 1669 1690 1667 1690 0.93

8 13 0.15 9.5 6.9 0.2 2 23 1701 1721 1700 1721 0.96

9 13 5.6e-05 0.0036 17.6 0.4 1 19 1727 1745 1727 1749 0.95

10 13 2.6e-05 0.0017 18.7 1.4 1 23 1757 1779 1757 1779 0.98

11 13 0.00011 0.0068 16.8 7.6 1 23 1785 1807 1785 1808 0.96

12 13 0.00025 0.016 15.6 6.1 1 23 1813 1835 1813 1835 0.98

13 13 0.029 1.9 9.1 8.2 1 23 1841 1863 1841 1864 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.064	4.2	8.0	0.2	1	23	1343	1366	1343	1366	0.94
2	13	8.2	5.3e+02	1.4	0.2	1	23	1529	1551	1529	1551	0.91
3	13	0.00018	0.012	16.0	2.7	2	23	1554	1575	1554	1575	0.97
4	13	7e-05	0.0045	17.3	0.2	3	23	1583	1603	1581	1603	0.98
5	13	5.8e-07	3.8e-05	23.9	4.1	2	23	1610	1631	1609	1631	0.97
6	13	5.5	3.6e+02	1.9	0.4	5	23	1644	1662	1642	1662	0.96
7	13	1.4	89	3.8	5.4	3	23	1669	1690	1667	1690	0.93
8	13	0.15	9.5	6.9	0.2	2	23	1701	1721	1700	1721	0.96
9	13	5.6e-05	0.0036	17.6	0.4	1	19	1727	1745	1727	1749	0.95
10	13	2.6e-05	0.0017	18.7	1.4	1	23	1757	1779	1757	1779	0.98
11	13	0.00011	0.0068	16.8	7.6	1	23	1785	1807	1785	1808	0.96
12	13	0.00025	0.016	15.6	6.1	1	23	1813	1835	1813	1835	0.98
13	13	0.029	1.9	9.1	8.2	1	23	1841	1863	1841	1864	0.95

Sequence Information

Coding Sequence: atggtgGACAATAGTGTGCAGTGTCCCGTGTGTACTTTGTACCTGCATGCGGGCATGAATCTCTCGGATCATTTGGAGACGCATCCCAAGGAGCAGGTGATCAAAGCGCTGGTGCAAATGACAATCGTTGGCAACAACCCCATGGGCTGCTCgctggcggcggcagctgcgcTCGCCACTGCCGGCAGTGGCAAACAAACAGCGGTGGCAGCGTCAGACGTTGCCGCCTCCCCCTCCTCCTCGTCATCTTCCGCAACAGCGGCCGATGCTGATGTGAAAccagctgtggcagcaacgacagcgatacccacaacaccagcagcagcagcaactgcaacgcaAACAGCTccagcgacagcaacatcagcaaatacattaaaatcaacagcagccaaagcTGCCCCATTGCTGGGCAATGCGAACGCCAACACAagcagtaacagcaacaataacaaattgagCAATCCACCGATTAAGGCAGTCAAAAGCGCGCCACCCTCGACTGAGGCATCAGCCAGCACATCCAGTAACACACCCACCATAAGCAGCGTGGCCGCCGCCTATCCGCCCTCCTTGACATCCGACTATCGCTAcgatcaacagcagcaacagcaacagccccaacaacagcatcagcagcagcagcaacaacaggcgACGCCAACAGGAGCAACACTTCATGGCTTTCCACGTGGTGCTACCACAATGCTGGTGATACCGCAGGCTGGGCAACAGCATCAGTTTCTGGCAACGCAGCCCGCTCACtttgcccagcagcagcagcaacagtcgcccATGAAGTACACTTATGCCACCGCAACGctgccaccgccgccaccACCGCTACAGCTTTTTACACAGCAGCTGACGACAGCGCTGTCGCATCAAAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCaaaacaagcagcaacaacagcagcaacaacatccacaacaacagcaaccacagcagcagcaacagcaacatataAGCGTACAACATAATGTTAACCTAGCACCACCGAATGGCAAGCACAGCAAAGCCCACACGGAGATCTTTCTGAATCCTCCGCCACCACCACCGACGATGCCGTCGTCATCTtccacatcatcatcaacgaCCTCCTGCGCCTCCAGACTGCAAccacagcatcaacaacaacatcctcACCAGCAATCGCTTCCAGCCAGCAGTAGCTTTGCAGCCACCAACTGCTCCAGCGGCCAAGCGTCGAGTGCCAGAAGCAGCAGTCGCCAGTCGACCAATTCACCATTTGGTGCACTGTTGAATGCAGCAGCACAGGCTGCCAGCTCATCGCCCGCCTCCTCCAGCGCCTCGGTGCTGCGCTATGCCGAATCGCCTGTGGCGCACTATCTGGAGCGGGAGAATGGTGATTTTATAGTGCAAGAGACGCCCAAGCACATTGTAGAGTGCGTGGAGAAGGATGACGGCGAGTTCTCGGTGATTGAACGCATCTATCAGTCACCGCCTAGCGTCCTGCATATacacgacgacgatgaggaggaggatCAGAGCTGGGCAAACAGTGAAGATGAAGATCACGTCAAGGTGGAGCATAATCATGTCGAGGATGGCGACGATGAACGTGAGGACAGTCGCAGCCGAGTTGGTCTCAAAACGACAACGCGAAAGTCACGCAAAACCAAACCGGGCAATCGAATGCACAAACGTTCCTCCAAGCATCAGTTGGCCatcgaggaggaggaagagttCATGAGCGTGGGCAGCAGCGACAATGAAGATGTTGAAGAAGACGAGGAGCATCATCATCACAATCATCAGCAGACGCAATCGGCTGCTGTGCAGGTCGCGTTGTCTTCGTCGCCACAGCTTTGCACGGCACCGTCGACGAGCAGCGGAGCCGCTTCGTCCGCCTCCGCTGGCATTACGAATGCCCCGTCCAGCGGCACCGTCAAGTCCAAAAAGAACCGCGTCACAGTGCTGAGCGATGTGCCGCTCAACATGAACGAGTATCTGGATTTGGTGGGCAATATTGTGGCCTCGAGTCGCATTGGTGCCACGCGTCCATTCGCCGCCGTTGCGCCCATTCCGCTGGTCAAGGTCGAGAAGGAGGAGCCGCTGGACGAATACGACAGCGTGCCGAGCGGCGAGCTGCCAGTGATGGAACAGAAGCCCAGCTTGGAGAATGCggccggcagcagcagcagtaacagcaGTAGCAATGGACACGGCGCAACCAGCGTCATACGCATGGCCAGCACTAGCTCCGCCAATGCCAATGTTCCGGCCGAGGATCTCACACAGCCGCCGCCCATGAAGGTCGAGGTGGAGCCAACGATGCTGTTGCCGCAACGCTTCTCGGCGCCGGCCCAGCAACGTGGTCCCAAGAAATTAGTCATCAAACCAAAGGCCACAGCatcggcaacggcaacgacagcagcgacggcgacgaaaAAGACTGATAACAACTGCGCCGAATCTCTCAGCATATCAAAAACATCGGCCGAACTGGTGCAAATCAAAAGCGAGACCGTCGAACCGTCCACCTCGAGTGGCGGCAGCATCCTCGAGAAGCATCTGACCACCAGCTATGCGGGGCAACAATCAGCGCGCAAACACTCCACAgtcaacgacgacgatgcgCGCGTCCTGCTCGAGTTTGCCAACTCCAAACAGTTGCCActggcaagtggcagcaatCCCACCACGTTTGTGGTGAATGCGGCAAGCTTTGCCTCGGCCGGATCCGTGTTTGCCAGcaacttgcagcagcagcagcagcaacagaagccgGGTGACGAGTACATACTGCCTGATGACAACAAAGTGGAAGTGGATGAAATTGTGATATCCTCGTCGTCTTCCTTTGCCTCCGCCacacagcagccgcaacagcagcaccaccagcatcaacagcaacatcaacagcagcatcatcaacaacatgcAACTGCTGCGACAGTGCAGGCAGCGCACTCAACATTGCAGCAGACACAGCCGCCAAACTTCAATGATTTCAACTTTCTGTATCAtcaaagtgcaacaacaacaacggcagcaacatccTCCAGCTTTGCGCCCTTCGGtctgcagcaacatcagcagcagccacaacacgGTTCCAGCGAAGCCACTAATGCAGCGACGCTCGCCTCATCCTCCAGCAACTCGTCAGCCATGGATCACGAGTCATCCATGAATGCATCGTTCCGAGTGGCCAAATCCCAGTCAACGTTGAGTGCGTGGTatcaaccacagcagcaacaacaacagcagcagcatcatcttcaccaacagcagcagcaaccgcagccAACAACTTCTCAGAATGTGGAGCAGTCAAGTAATTTTATTGCTGCCTTGGCGGCTGTCGATTGTTGCAGTGTCGCGATGGACAGTGATGCGAGCGATGCCAAGTATTTGGATCTGGACACATGCAAGCGGGAACAgttgagcaacagcagcagtcatTTGCCCTCGGCATCGGCATCTACATCGACAACATCATCCTCATTTGCAGCGGCAGCCACAGAGAGCAGTTTAGTTGGTGGTCTGGGCTTGAATATACGCACCGACGAGAAGATGCCCGCCAAGGGAGAAATTTCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCTTGGAGTCAATCGATGTACGGCGACATATCACAGCGATACTTTAGAAGCCAGTTTGCGGATGGTTACAATCAACAGCTGTCCGAATGGCGTCAGGACTATTATCCGGCGCAGGATCTCAgtggccagcaacagcagcagcagcgtgagCACAAACGATTTGATTTCAATGCGGTCGCATCCGAGTATGCGCAGCCGGGTGAACTGGACGCCTCCTCGAGCTCGGCGCGTAGCAATCAATTGCTGGATGCACAGCCCACCACCTCGACGTCGACATCGGCATTGCTGGCTGGTCCACCAATAGCCTCGACATCCAGAGCTGCCGCCGAAGCAGAGGCCGTTGCAGCTGCATTGCAGCGCAAGGGTCAACGACGCAAGATCTACAGGTGTCCACACTGTGTGGCCATTTTCGAGAAGCTCAAGGATCGCAATGCACATATGATTGGCGAGCACAACTACGTGCGCCAGAACCGTCGACTCATCTGCACCCAGGCATTGGTCAATGGTGCTATACTGGCACAGCCCCAGGTTCTACAaccaccgcagcagcagcaagaattGTTGCTGCAAGCAGGGGGCAGCAATAGCGAAGTTCTGCATGAAGATTCCAAGGATGGCATTGTTAAGATTAAACAGGAGCACTGTCAGGACAAGCCTGATTCAACGGATCAGCAGCTGCTCGTGCATTTGGAACTGCCCGATGTAAAAGATGCCGGTTTATTGGCCGTCAATGGCGAAAACGCTGGCGATGCAGACGTGAAGCCATCAACGAACGTGACGACGGATCTGAAGCCCACCATAACGCCGCTGAGTATGACAACACCGGCTGCTAAATTGGCTGCTATTTATCGCATGCTCATTTCTTACAACGAGTCGAAGCTGGGTCAGGACCATCATAATCTCAGCGAACTGGAGCAGAAGGCAATGGAGAAATCCATATTTCTGTGCTACGTGTGTCGCACCGACTTTCCCTCGGTGAAGTTGTACGATGCCCATTTAACTGAGCATCCCGCCGAATGCTTTACCTGCGGCAAGAAATTCTATCGCTGGAAGAACTTCTCACTGCATCTAAAGCGTCATCTTGGCTGGAAGGAGTTCGGCTGCTATGTCTGCGATAAGAAGTTCGTGGTGCGCAGTGCTCTCGTCGAGCATATGCGCATGCATACGGGCCAAACTCCCTTGAAGTGCAAGATATGCGGCAAAAAGTTCAAACGCTACTCCAACTTGACTCAGCATCGGAAGCGTCACACCAAAATGACCGTACGTAAAAAGGAGTATGTGTGTCATTGCGGCGAGGTGTTGCCATCGAAGGCACGCTTCCTATGGCACAAGGAAACGCACGACTTGAAGCCCAAATGCTGTCCGTACTGCTGTGATCGTTTTGTGCACGCCAATTCACTGCGTCGACACATTCGGCTGGCCCATTCGGACAAGTTCGATTACGCCGAACCCATGGAATGCCCCATGTgcaagcaaatatttgcgaaAACGTCCATTAAGGCGCACATGGCGACGCATTCAACGGATCCGCAATACGATTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCACGCCAATCGCACTGCCAAACCGTTCAAGTGCGAACACTGTCCCAAGGCGTTTGTACGCGAACTGGACTTTAAGAATCACATGAATGCGCACAAACAGATCAAGCCGTACACATGTGAGTATTGTGGTTGTAAGTTCATACGCAAATACAATTATATGCGGCATCGGCGAGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGACTTTCCATCGGCACTACTATTTGATTGAGCATCGACGAATTCACACGGGCGAGCGACCTTTCCACTGCACCATCTGCGGCAAAAGCTCCACCACGAAGACCAATCACAATAAGCATCTGAAGATACATCATTCGCGTGATCCCTTTACCGTGGAGGTTTAA
Protein Sequence: MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNPMGCSLAAAAALATAGSGKQTAVAASDVAASPSSSSSSATAADADVKPAVAATTAIPTTPAAAATATQTAPATATSANTLKSTAAKAAPLLGNANANTSSNSNNNKLSNPPIKAVKSAPPSTEASASTSSNTPTISSVAAAYPPSLTSDYRYDQQQQQQQPQQQHQQQQQQQATPTGATLHGFPRGATTMLVIPQAGQQHQFLATQPAHFAQQQQQQSPMKYTYATATLPPPPPPLQLFTQQLTTALSHQKPPPAYGAAISQIRSQHNQNKQQQQQQQHPQQQQPQQQQQQHISVQHNVNLAPPNGKHSKAHTEIFLNPPPPPPTMPSSSSTSSSTTSCASRLQPQHQQQHPHQQSLPASSSFAATNCSSGQASSARSSSRQSTNSPFGALLNAAAQAASSSPASSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEDQSWANSEDEDHVKVEHNHVEDGDDEREDSRSRVGLKTTTRKSRKTKPGNRMHKRSSKHQLAIEEEEEFMSVGSSDNEDVEEDEEHHHHNHQQTQSAAVQVALSSSPQLCTAPSTSSGAASSASAGITNAPSSGTVKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGATRPFAAVAPIPLVKVEKEEPLDEYDSVPSGELPVMEQKPSLENAAGSSSSNSSSNGHGATSVIRMASTSSANANVPAEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATASATATTAATATKKTDNNCAESLSISKTSAELVQIKSETVEPSTSSGGSILEKHLTTSYAGQQSARKHSTVNDDDARVLLEFANSKQLPLASGSNPTTFVVNAASFASAGSVFASNLQQQQQQQKPGDEYILPDDNKVEVDEIVISSSSSFASATQQPQQQHHQHQQQHQQQHHQQHATAATVQAAHSTLQQTQPPNFNDFNFLYHQSATTTTAATSSSFAPFGLQQHQQQPQHGSSEATNAATLASSSSNSSAMDHESSMNASFRVAKSQSTLSAWYQPQQQQQQQQHHLHQQQQQPQPTTSQNVEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDTCKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRSQFADGYNQQLSEWRQDYYPAQDLSGQQQQQQREHKRFDFNAVASEYAQPGELDASSSSARSNQLLDAQPTTSTSTSALLAGPPIASTSRAAAEAEAVAAALQRKGQRRKIYRCPHCVAIFEKLKDRNAHMIGEHNYVRQNRRLICTQALVNGAILAQPQVLQPPQQQQELLLQAGGSNSEVLHEDSKDGIVKIKQEHCQDKPDSTDQQLLVHLELPDVKDAGLLAVNGENAGDADVKPSTNVTTDLKPTITPLSMTTPAAKLAAIYRMLISYNESKLGQDHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKTFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00537699;
90% Identity: iTF_00614414; iTF_00520857;
80% Identity: -