Dfla012684.1
Basic Information
- Insect
- Drosophila flavopinicola
- Gene Symbol
- Lztr1
- Assembly
- GCA_035042425.1
- Location
- JAWNLL010000455.1:478423-482520[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.9e-06 0.0016 18.6 0.0 2 53 569 619 568 627 0.80 2 5 1.7e-08 3.6e-06 27.1 0.0 50 108 644 709 629 711 0.85 3 5 0.56 1.1e+02 3.0 0.1 78 108 711 741 708 743 0.90 4 5 5.9e-19 1.2e-16 60.8 0.0 8 97 802 891 796 906 0.85 5 5 7.8 1.6e+03 -0.7 0.0 72 100 900 928 894 936 0.84
Sequence Information
- Coding Sequence
- ATGCTAAAGTCCATACTCGGCGCGGACACGAATGGTTCTGCGGAAGATCTACCAAGTGGAGGCGTTGGCGTCGCCAGCGGTGGGAGTGGTAGCAGCGGTGGTGGCAGTAGTgggggcagcggcagcagcagaagcagcgccGGAGGCGCACTTAGTCGAGCCAGTTGTGGCCTGGGCTCCAGCTCGATATCCAGTGGCCTAAGTGCTGTGTGCGGCCTGGTCGCAAGTGGAAGTGGGAGTGGTACTGGGAGTGGTACTGTGAGTGGTACAGGAAGCGGTACAGGGAGTGGCACTGGCAGCGGTAGCGCAAGTGGCGGCAGCACACCAGCAACCATTTATTGCCCTGCATGCGTAGCAAACGGATCGCAGCAGCTGGCATTGGGCTCTGGTGACACCACATCGGGCAAGCGGATTAAGGCGCGCAAGAGTGCATCAACAGCTGGCTGTTTGGATGCACAGCATATACGCAATAATCTGAAAATGTCCACATCGAGCTCGATGCGCAGCACACGCGGCGCCGGcaactgcagcggcagcagcagcagtagcaccGCCTCATCGGCCGTGATGCCCGCGGCTCTGGTCTACGATGCTAACAGCAATGCCAATGGTAATGGCAACTGCGGCAGCTTCAATGGCAAGACCAACTCGCCgggcagctacagctacagctgcaaCGCGCTCAACGTTGATTTCACCTCCTATACGGCCACGCATCAGTGGACGCGCATGCTCGAGTGTGCCGAGTTTGTCGGCGCCAAACGCAGCAAGCACACGGTGGTTGCCTACAAGGATGcaatgtttgtgtttggcgGCGACAATGGGAAGAACATGCTGAACGACCTGATACGGTTTGGGGTCAAGGACAAGTCCTGGGGGCGAGCATGCGCAACGGGAACACCGCCTGCGCCGCGCTATCATCATTCCGCTGTAGTTGCGGGCAGCTCGATGTTCATCTTTGGCGGATATACGGGAGACATACACTCAAATTCGAATCTGACCAACAAGAATGACTTGTTTGAGTATAAGTTTCTCAGCGCCATGTGGGTCGAGTGGAAATTTTCGGGCAGGCAACCAGTGCCCCGCTCAGCGCATGCAGCAGCGGTCTATGACAACAAAATGTGGATTTACGCCGGCTATGATGGCAATGCGCGACTGAATGATATGTGGACGTTGAATTTGACTGGCGAGAATCATCAGTGGGAGGAGGTGGAACAGCAGGGCGACCGTCCGCCCACCTGCTGCAATTTCCCCGTTGCCGTTGCCCGCGATGCCATGTATGTGTTCTCCGGCCAGAGCGGGCTGCAGATAACAAATTCGCTGTTCGAGTTTCACTTCAAGACACGCACCTGGCGTCGCATCTCCAATGAGCCGGTGCTGCGTGGCGCCACCTCGGCGCCACCGTCGCGTCGTTATGGCCACACCATGGTCCATCACGACCGCTTTCTGTATGTGTTTGGCGGCTCAGCTGATTCGATGCTGCCAAATGATTTGCACTGCTACGATCTGGACTCGCAGCTATGGTCCGTCATACTGCCGGAGCAGAACTCGGATTCGCCGTCGGGCCGTGTTTTCCATGCGTCGGCCGTAATTGGCGATGCAATGTACATCTTTGGCGGCACCGTCGACAATAGCGTGCGACGCGGTGACACCTATCGCTTTCAGTTCTCCAGCTATCCAAAGTGCACGCTGCGCGACGACTTTGGCAAGTTCTACCAGGAGAAGCAGTTCTGTGACATTCAGTTTCTTGTCGGCGCCGAGGAGATACGCATCCTCTCGCATATCGCCTTCGTGGCGGCACGTTCCAAATACTTGCGCAACAAGATATTGTCCGCGCGCGAGTCGCGTCAGCAGCAATTGGAGAAAGTCTATGGCGTGGGCCAGGTGGACACGTTGGCCTTGAATACGGGCGTTGGGGGGGAACGTGTGCCGATGCTGGAGGTGCGACTGTCGCATGCCTCGCCCGAGGCATTCGAGATCATACTCAACTACATCTATACGGATCGCATTGATCTGAAGGACTCATACAGCAAGAACATCATCATACTCATCACGGACATCTATCAGTTGGCCGGTTTGTTCACAATGCCGCGCCTGGCGCACGGTTGCATACAGTATTTGGACTATAAGATCAACAAGATAAATGTCCTCGAGGCGCTCTACAACGccgacaaaaacaaCATCAAGATCATTAAGGATCACTGCATGCAGTTCATCATCAAGGAGGAGAATTTCACCGAAGTGGTCATGTCCAGTGAGTTCAGCGATCTGGACAAGCCGCTTCTGGTCGAAATAATACGAAAGCGTCTGCATCCCAGCAAGCTGGTGATAGACACTACTTATGAGTCAAATATTGGCACCACGCTGGAGCATGATTTGTCCATGTTCTTGGAGACAACAGGCAAGGATTTTTGCGACATTAGTCTCATACTGGAGGATCATGTGATACCGGCTCACAAATCTGTGTTATCATCACGTTGTACCTATTTCCAGGGCATGTTCCGCTCTTTCATGCCACCAGATAATACCGTTAATATACAAATTGGCGAAATATCGCCCTCACTGGAGGCATTTAATTCGCTTCTGCGCTACATATACTATGGGGAGACAAAGATGCCGCCACAGGATGCGCTCTACTTGTTCCAGGCACCCTGTTTCTATGGTCTGTCGAACAATCGTTTGCATGCATTCTGCAAATACTCACTGGAGCATAACATTACGTCGGAGAATGTTCTGCAGACTCTGGAGGCGTCCGACATAACAAAAATCTATGACATCAAGGATTAtgcattgaaattgattgTGAAAGATTTTGCCAAGGTGGCCAGGCTGCCCAAAATAGCCGGTTTGTCGCGCGAACTGTTGCTGGAGATCATACGCGCTGTGGCCGATTCGCAAGGCGAGTTTCTGACCCGCATCAATATCAATACAGATATCTGA
- Protein Sequence
- MLKSILGADTNGSAEDLPSGGVGVASGGSGSSGGGSSGGSGSSRSSAGGALSRASCGLGSSSISSGLSAVCGLVASGSGSGTGSGTVSGTGSGTGSGTGSGSASGGSTPATIYCPACVANGSQQLALGSGDTTSGKRIKARKSASTAGCLDAQHIRNNLKMSTSSSMRSTRGAGNCSGSSSSSTASSAVMPAALVYDANSNANGNGNCGSFNGKTNSPGSYSYSCNALNVDFTSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFLSAMWVEWKFSGRQPVPRSAHAAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENHQWEEVEQQGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSMLPNDLHCYDLDSQLWSVILPEQNSDSPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFYQEKQFCDIQFLVGAEEIRILSHIAFVAARSKYLRNKILSARESRQQQLEKVYGVGQVDTLALNTGVGGERVPMLEVRLSHASPEAFEIILNYIYTDRIDLKDSYSKNIIILITDIYQLAGLFTMPRLAHGCIQYLDYKINKINVLEALYNADKNNIKIIKDHCMQFIIKEENFTEVVMSSEFSDLDKPLLVEIIRKRLHPSKLVIDTTYESNIGTTLEHDLSMFLETTGKDFCDISLILEDHVIPAHKSVLSSRCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFNSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITSENVLQTLEASDITKIYDIKDYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSQGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- -
- 80% Identity
- -