Basic Information

Gene Symbol
ken1
Assembly
GCA_035045575.1
Location
JAWNOV010000167.1:3127757-3129904[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0017 0.13 12.9 3.3 2 23 194 215 193 215 0.96
2 12 0.0084 0.63 10.8 0.1 1 23 221 246 221 246 0.90
3 12 0.07 5.2 7.9 0.1 3 23 255 278 253 278 0.93
4 12 0.0056 0.42 11.3 1.6 2 23 291 312 290 312 0.96
5 12 1e-05 0.00078 19.9 0.6 1 23 319 341 319 341 0.98
6 12 0.01 0.75 10.5 0.2 1 23 347 369 347 369 0.98
7 12 0.14 10 6.9 3.1 1 23 375 398 375 398 0.97
8 12 0.011 0.83 10.4 4.0 1 23 404 426 404 426 0.96
9 12 0.00094 0.07 13.8 2.9 2 23 433 454 432 454 0.96
10 12 0.00021 0.016 15.8 1.1 3 23 548 569 546 569 0.95
11 12 0.00068 0.051 14.2 1.0 1 19 575 593 575 597 0.95
12 12 3.5e-06 0.00026 21.4 0.3 1 23 603 625 603 625 0.98

Sequence Information

Coding Sequence
ATGAGCACAGCCACAACGTACTCAGTTGATTCCATGTGTCGAGTTTGTTTAGTCCAGCTCGAGTGCGTCACTACATATGACCTGTTCTTATTGCCTGATCTCGCCAAGACTTTCACAGTGTGCACATCCTTGCTGCTGGAGCCCCAAGATGGCTACCCTAGGAATCTCTGCGGGAGTTGCTACGCCCGACTGAAAGATCTCGATGAATTCCGGCAGCTGTGTGTGGCGTCCATGCAGCGTTTGAAGCAAATGTTGGAAAACAAAGTGGTGAATTCATTTCCTGTTGAGGTCAGCAATGAGACGGAGCTGCTGCTGGTTAAGCATGAGCAGGAACTGAACACGGATTATGATCCGCTGTTAAGCCACAAATTGGAGATTGACAATGTTGAGGATGTGTTTAAACTGCTGGAGAGTGTGGACAaggaggcggaggaggaggaaattGTGAGAAATTCCTCCGAGAGTAGTTACAGTGAGGATGATTTGCCACTGGCACAACGTCTGCCGTCAAGTCCCGCCAAATCCAAGACGAAACGCCAGCGAATTCCACGAGCGGAGCGTCATCTGCATCGCATCATCAGTTGTCAGATTTGCCAGCAGAAATTCAAGAAGCAACTCAACTACGAGGAGCACATGAAGCATCACAATGAACTGTTGCCCTTTCAGTGCCGTATGGAGAGTTGCCAGAAGGGATTTACCACAGCGGCTGCACTGCGTCTGCATGTGGACTATGCGCACGGCAAGAGCGACGCCGAGATACCCTGTACTGTCGAGGATTGCAAGCTGTTGTTTCCACGCATGCGACTGCTGACAATACACCTAAAAAAGGTGCATAATCTGAGCAGAGCAAGTGCGCCACGCGTGGAGCAATCCTGCAGAGAATGTGGCATGATCTTTCGCTGTCCAGTGGCATTAAAGAAGCATATGTATAAGCATACGGGAGAGCAGCTGCCGTATCCGTGTAATATCTGTGGCAAGGGATTCCATATAAATAGCGCCTTGAAGAATCATTTGCTGCGTCACGCGGGGATTAAGAACTATGTGTGTCCTTACTGTGGTGTGGGCAAGACCACCAGGCAGGAGTGGAGCAAGCATTTACTCACCCACACGCAGGAGAAGATGTTCAAGTGCCAAAAGTGTGAACATGCGACGCACACGAGAAGAGCCTTAGATAATCATGTGAAGATTGTGCACGAGAAGATTAGGAACTTTGCGTGTCAGTATTGTGGCAAGACCTTTGGTAAATCCCATGCTTGTAAAATTCACGAGATGACGCACACGGGAGAGAAGCGTTGCGAGTGCAAGGTCTGCGGCAAGAAGTTTCTCTATACGGAGAGTCTTACCAAGCATCTGAAAATTCACGAGAAGAGCGTGGAGCGAGCGATAGAGACGTATAGACAGCGACAGGTGGAACTGGGTGATGCAGGAGAGGAGCAACCAAGTGGCAATGTAGCTGACCAGGCGGCGGATCAACTCCTAAAGGTCTGTGCGGCATCTGTGGCCACCATACCCAAGGATCCGAGACGTGTGGAACGCGTGGACTTGTCGCAACTGGCTGGCACCGTTGTCAATCCCATACCATCTGTCCAACTAATCACAAGTTCAGCTGGCAACTTGGTGCAAAAGGAGGGACTGCATCTATGTCCTGGCTGCCAGCAGGGATTCAACAATCTGGGCAACATGAAGCGACACTACAAGAGTGTCCATGAGAAGGTCAAGGACTTTGAGTGTCGCTACTGTTCACGTCGCTTTGCCAACTCGCAATCCCTCAAGCAACACGAATGGATTCACACCGGTGAGAAGCCCTATGCCTGCAAGATTTGTGGCGCACATTTCCGGCAGGAGGCGGCCTTAATACGTCACCAAAAGGTGCACGAAGAGAAGCCACCAAAGCCGGAGAAATTGCCCAAACAAATCACGGAAAAGTATCGACAAAAACAAGTCCAGAAATGTGAGAAACGTCGCAATGTGGAAGCGTTGCGGGAGAAGATCGCGGAAGCCGCCAAGGAGGAGCTGCAGGAACTGGCCAAACAGCGGGAACTGGAGAAGCAACAAAATACCTATGAACAGTATCAAGCGGCAGCTAAAAGAATCCCACAGATTCCTGAGATCCCAGAGAAATCCGAGGAGAAATCTCTGCTCAACTGA
Protein Sequence
MSTATTYSVDSMCRVCLVQLECVTTYDLFLLPDLAKTFTVCTSLLLEPQDGYPRNLCGSCYARLKDLDEFRQLCVASMQRLKQMLENKVVNSFPVEVSNETELLLVKHEQELNTDYDPLLSHKLEIDNVEDVFKLLESVDKEAEEEEIVRNSSESSYSEDDLPLAQRLPSSPAKSKTKRQRIPRAERHLHRIISCQICQQKFKKQLNYEEHMKHHNELLPFQCRMESCQKGFTTAAALRLHVDYAHGKSDAEIPCTVEDCKLLFPRMRLLTIHLKKVHNLSRASAPRVEQSCRECGMIFRCPVALKKHMYKHTGEQLPYPCNICGKGFHINSALKNHLLRHAGIKNYVCPYCGVGKTTRQEWSKHLLTHTQEKMFKCQKCEHATHTRRALDNHVKIVHEKIRNFACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYTESLTKHLKIHEKSVERAIETYRQRQVELGDAGEEQPSGNVADQAADQLLKVCAASVATIPKDPRRVERVDLSQLAGTVVNPIPSVQLITSSAGNLVQKEGLHLCPGCQQGFNNLGNMKRHYKSVHEKVKDFECRYCSRRFANSQSLKQHEWIHTGEKPYACKICGAHFRQEAALIRHQKVHEEKPPKPEKLPKQITEKYRQKQVQKCEKRRNVEALREKIAEAAKEELQELAKQRELEKQQNTYEQYQAAAKRIPQIPEIPEKSEEKSLLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00558090;
90% Identity
iTF_00575773;
80% Identity
-