Dere008815.1
Basic Information
- Insect
- Drosophila erecta
- Gene Symbol
- retn
- Assembly
- GCA_000005135.1
- Location
- CH954179.1:20896389-20903730[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-26 6.2e-23 81.0 0.0 2 89 20 105 19 105 0.96 2 2 1.5 4e+03 -1.7 0.1 13 13 261 261 212 305 0.64
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAAGATCAAATTCAGGAGCTCTATGAAATCAATGATGACCCCAAGCGCAAAGAGTTCCTGGACGACTTGTTCTCGTTTATGCAGAAGCGCGGAACTCCGATCAATCGGCTGCCGATTATGGCCAAATCGGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATAACCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCACCTGCCCTCCAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGCGACCCTCCCTACCCGGTGGCATGCAGCAAATGTCGCCGCTGGCGCTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCTCAGGCCGCCGCGGCCGCCGCAGCAGCTCATCATCGCCTGATGGGCGCTCCCGCCTTTGGCCAGATGCCCAATCTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGCATGCCGCCAGTTCTGGGCACCAATCAtccccaccagcagcagcactcgcagcaccagcagcagcacctccaccagcagcagcagcagcagtcgcagcagcagcaccacctgcagcagcagcgccagcgcTCCCAGAGTCCGGATCTCAGCAAGCACGAGGCGCTCAGTGCCCAGGTGGCCCTGTGGCACAtgtaccacaacaacaacagcccaCCGGGATCGGCACACACCTCGCCGCAGCAACGCGAAGCCCTGAACCTGTCCGACTCGCCCCCAAATCTCACAAACATCAAGCGGGAACGCGAACGGGAGCCCACTCCGGAGCCCGTGGACCAGGATGACAAGTTTGTGGACCAGCCGCCTCCAGCGAAGCGCGTGGGCAGCGGCCTCCTTCCGCCCGGCTTTCCCGCCAACTTCTATCTGAATCCACACAACATGGCCGCTGTGGCAGCAGCCGCGGGATTCCATCACCCATCCATGGGCCACCAGCAGGATGCCGCATCCGAGGGCGAACCGGAGGACGACTACGCCCACGCCGAGCACAATACCACGGGCAACTCATCCTCGATGCACGACGACAGCGAGCCGCAGCAGATGAACGGACACCACCACCAACAGACCCACCATCTGGACAAGTCCGACGACTCGGCCATTGAGAACTCGCCCACCACGTCGACCACCACCGGTGGGTCGGTGGGTCATCGCCACAGCTCGCCCGTTTCCACCAAGAAGAAGGGCGGCGCTAAACCCCAGAGTGGCGGGAAGGATCTGCCGGCCGAGGACAAGGATGCGTCGTCCAGTGGCAAGCTCAATCCCCTGGAGACGCTGAGCCTGCTGTCCGGAATGCAGTTTCAAGTGGCAAGGAATGGAACTGGCGATAACGGCGAACCGCAGCTGATTGTCAATCTGGAGCTTAATGGCGTCAAGTACTCGGGCGTACTGGTGGCCAATGTGCCGCTGTCCCAAAGCGAGACAAGGACGAGCTCACCCTGCCACGCTGAAGCACCCAGCGCCGAGGAGGAgaaggatgaggaggaggagccaaAAGCCGCTGAAGAGGAATCGCATCGATCGCCAGTTAAGCAGGAGAGCGAGGAGGCCGACCAGGACATGGAGGGCAATGAAATCCTCCTCAACGGAGCTGCTtcggcggtgggtggtgctggtgctgttgctgttgctgttgctggtgtggGTATGCCCCTGCTCAAGGATGCCGTGGTCAGCTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVITRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGTNHPHQQQHSQHQQQHLHQQQQQQSQQQHHLQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHAEHNTTGNSSSMHDDSEPQQMNGHHHQQTHHLDKSDDSAIENSPTTSTTTGGSVGHRHSSPVSTKKKGGAKPQSGGKDLPAEDKDASSSGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQSETRTSSPCHAEAPSAEEEKDEEEEPKAAEEESHRSPVKQESEEADQDMEGNEILLNGAASAVGGAGAVAVAVAGVGMPLLKDAVVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00607596; iTF_00614695; iTF_00542927; iTF_00494168;
- 90% Identity
- iTF_00607596;
- 80% Identity
- -