Dval011188.1
Basic Information
- Insect
- Drosophila vallismaia
- Gene Symbol
- retn
- Assembly
- GCA_035047325.1
- Location
- JAWNPU010000066.1:17061719-17068842[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-26 5.8e-23 81.3 0.0 2 89 20 105 19 105 0.96 2 2 2.4 7e+03 -2.3 0.3 51 51 265 265 234 303 0.55
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAAGATCAAATACAAGAGCTCTATGAGATCAATGACGACCCCAAACGCAAAGAGTTCCTCGACGATTTGTTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGACTGGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCATCTGCCCTCGAGCATCACCAGTGCGGCCTTTACCCTGCGCACTCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACCCCAGCGGAGCTGCAGGCGGCCATCGATGGCAACCGCCGCGAAGGACGTCGCTCCAGCTACGGTCAATACGAAGCCATGCACAATCAGATGCCATTGaCGCCCATTTCGCGACCCTCTCTGCCTGGAGGAATGCAACAAATGTCACCGCTGGCTCTCGTCACCCATGCCGCAGTGGCGAATAACCAACAGGCCCAGGCTGCCgcagccgctgccgccgcccaCCATCGATTGATGGGGGCCCCGGCCTTTGGCCAGATGCCGAATCTGGTCAAGCAGGAGATTGAGAGCCGCATGATGGAGTATCTGCAATTGATTCAGGCCAAGAAGGAGCAGGGCCTGCCTCCGGTTCTAGGCGGCGGCCATCCCcatcagcagcaccagcagcagcaccagcaacaccaggcccagcagcaacagcaccagcaggCGCAGCAACAGTCGCATCACCtgtcgcagcagcagcagcagcgccagcgCTCCCAGAGTCCGGATCTGAGCAAGCACGATGCTCTCAGTGCTCAGGTGGCTCTGTGGCGCATgtaccacaacaacaacagtccGCCCGGATCGGCACACACCTCCCCTCAGCAACGCGAAGCTTTGAACCTCTCGGACTCGCCGCCAAATCTCGTTAACATCAAACGGGAGCGGGAACGTGAACCCACCCCGGAGCCCGTGGAACAGGACGATGGCCCCCACCAGCCGCCGCCGGCCAAGCGTGTGGGCAGTGGCCTCCTGCCGCCCGGATTTCCCTCCAACTTCTATCTGAATCCACACAATATGGCCGCAGTGGCAGCGGCTGCCGGATTCCATCACCAGGCCAGCCACCGGGAGCAGGATGCCGCCTCCGAGGGCGAGCCGGAAGATGATTACGGACATAATGAGCACAACACGACCGGCAACTCTTCGTCCGTGCACGACGAGAGCGAACAGCAGCCGATGAACGGACATCATCACAgccaccatcaccatcaccagaACCACCAGCTGGACAAGTCGGATGATTCGGCTATAGAGAACTCGCCCAGCACATCGAACACCACTGCTTCGGTGGGACATCGTCACAGTTCGCCCGTCTCCACCAAAAAGAAGAGCAGTGGCAAGGCCCAGGGCAGCGGATCGGGTGAGGAGAAGAGTTCCTCAAACGTGAAACTGAATCCTTTGGAGACTCTGAGCCTGCTATCGGGCATGCAGTTCCAAGTGGCCAGAAATGGCACTGGCGAGAACGGCGAACAACAATTGATTGTCAATCTGGAGCTGAATGGCATCAAGTACTCCGGAGTTCTGGTGGCCAATGTACCGAATCTCGCCCAAAACGAAACAAGGACCAGCTCGCCTTGTCGCCCAGAGGCTTCAGCGAACCAGGAGGCGGGTGAGCtgccggaggaggaggacgaggaggaacACGACGGCCAGGAGGCAAAGTCCTTAGCTGAAGAGGATGCCCATCGATCGCCGGTTAAACAGGCAATGGAGAACGAACAGGATGGCCAGGACCAGGCCATGGAGGGAAGCAGCAGTGCAGCGGCGGCTATTTTGAACGGGGGTGCCAGTGTGGGGATGGCCCTCTTGAAGGATGCTGTGGTCAGCTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGLPPVLGGGHPHQQHQQQHQQHQAQQQQHQQAQQQSHHLSQQQQQRQRSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLVNIKREREREPTPEPVEQDDGPHQPPPAKRVGSGLLPPGFPSNFYLNPHNMAAVAAAAGFHHQASHREQDAASEGEPEDDYGHNEHNTTGNSSSVHDESEQQPMNGHHHSHHHHHQNHQLDKSDDSAIENSPSTSNTTASVGHRHSSPVSTKKKSSGKAQGSGSGEEKSSSNVKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLAQNETRTSSPCRPEASANQEAGELPEEEDEEEHDGQEAKSLAEEDAHRSPVKQAMENEQDGQDQAMEGSSSAAAAILNGGASVGMALLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00504469;
- 90% Identity
- -
- 80% Identity
- -