Derc009800.1
Basic Information
- Insect
- Drosophila ercepeae
- Gene Symbol
- -
- Assembly
- GCA_018150545.1
- Location
- JAECWL010000164.1:4172508-4174139[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.2e-16 1.4e-12 46.9 0.0 3 45 358 400 356 400 0.95 2 3 0.042 93 2.6 0.0 28 37 430 439 429 444 0.90 3 3 4.8e-19 1.1e-15 56.9 0.0 2 39 466 503 465 506 0.96
Sequence Information
- Coding Sequence
- ATGAATCATCTGAAGTGGATGGGCCACTCGTCCACGATAATGGACATCCAGCGCTCGCTGCGCAACGATTCCCAGACATGTGAAGTAGTGCTAGCCTCCAGGGATGGCGTTCGAGTACGCGCCCATCTCTTCGTGCTGAGTACTTGCAGTGATCTGATGCGAAATATTCTAGTGGATGTGCCGCCCGGGCAGGAGGCCACCATCATGCTGCCGGACATACGAGGGGAACTCCTTGAAAGCATGCTCTCATTCATATACATGGGAGAGACCAGTCTGCCCTCCGCTTCGCTGTCCGAGTTTCTGGAAGCCATCAATCTTCTGGGCATCAAGTCAGCTATAAGTTTTGAGTGCAATCCTTCCATTGCCAATTCCTCCATGGCCATCAACTCTGCCACTACAATGGCTGTGGAGGCTGCCAAATCCATAACAGGCCTGCAGATAGCCCAGGCCGAGCTGCTGGAGGAGGAGGAAGAGGTCCCGGCAGCCAGCTCCGTTGCAGCCACGGTTATGGCCGACCCACCCACTCACTCTGCACGTTCCCTGGAATACTTGGACGTGTATGAAACTCCGAAGATCACCTACTCCATCGAGCATATGGACGGGAATGCAGGTGGAAATCAGTTTATTCTGACGGAAAACACAGGAACCTTTACCATAACACAGAGTGCTACTACTTTGGCCAAGTTGGAGACAACGGAATCGTCGGCTGGGGTAGCCGATGGGGAGCTGGTGGATGACGAAGTGGACGGAGATGGGGATGAGGACGCGGACCCTGACGCAGACCCCGAGGCAGACCTGGCGGAAGATTCCGAGGGGCCCGACAATCAGATAATGGACGAGGAGTATGTGGCATCTGATCCGCCTTTTGAAATCGGAACTGCCGGCGACATGGATGACGATGACATGGCCGAAGATATGGAGGAGGAAATCCTTAGTGTGAAATCGCGTAAGCTTACCGAGGCAAAACCGCGGAGCCGTCGTTCTGTAAACCCTAAGCCCTCGAAGCGTTCTTTCGGTAAACATCAACAGGAATTTACGACGCTCAAGCGGGATATAAAGGATGACATTAGTGATGCCCTGGATCTGGCAGCAGATGCCGTGATCCTAGAGGGCTTGAGCTTGCAGAAGGCAGCAGATCGGTTCGACATCTCCAAGACAGTGCTGTGGCGTCGTGTGCGCACCAATCCAGCCTATATGCGGAACAATCGCGAGAGGCCATCCCTTTCCGAAGCATATGAGCGTCTTAAGAACGGAGACTCTCTTAAGAGCATCAGTCAGGACCTGCGTATTCCCATGTCCACTCTGCACCGCCACAAGGTGCGCCTTTCGGCACAGGGCCGTCTGCCCGATTTTGTAGCCTGCCGTCGAAGGGACACCACGCCAAAGGATGAGCTGCGTGACAAACTTGCCAAGGCGGTGCATGCTTGCCTAAACGAGGGCATGTCCCAGAATCATGCAGCGAATCTCTTCGAGATCCCCAAGAGCACATTGTGGCGACACCTCCAGCGATATCTGCCAGAAGACAGCCGGAAGGTGAAGAAGGAACAGCAGGACGAGTGCGAGGACGAGCTACTAAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDSQTCEVVLASRDGVRVRAHLFVLSTCSDLMRNILVDVPPGQEATIMLPDIRGELLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSIANSSMAINSATTMAVEAAKSITGLQIAQAELLEEEEEVPAASSVAATVMADPPTHSARSLEYLDVYETPKITYSIEHMDGNAGGNQFILTENTGTFTITQSATTLAKLETTESSAGVADGELVDDEVDGDGDEDADPDADPEADLAEDSEGPDNQIMDEEYVASDPPFEIGTAGDMDDDDMAEDMEEEILSVKSRKLTEAKPRSRRSVNPKPSKRSFGKHQQEFTTLKRDIKDDISDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLSEAYERLKNGDSLKSISQDLRIPMSTLHRHKVRLSAQGRLPDFVACRRRDTTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRYLPEDSRKVKKEQQDECEDELLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615487;
- 90% Identity
- iTF_00614826; iTF_00546065; iTF_00504090; iTF_00615005; iTF_00545887;
- 80% Identity
- iTF_00504090;