Dequ009948.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- -
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000562.1:7356608-7362403[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0042 0.34 11.6 0.5 1 23 1211 1234 1211 1234 0.97 2 13 4.8 3.8e+02 2.0 0.2 1 23 1393 1415 1393 1415 0.91 3 13 0.00015 0.012 16.1 2.7 2 23 1418 1439 1418 1439 0.97 4 13 9.7e-05 0.0077 16.7 0.9 3 23 1447 1467 1445 1467 0.98 5 13 4.8e-07 3.9e-05 24.0 4.1 2 23 1474 1495 1473 1495 0.97 6 13 4.6 3.6e+02 2.0 0.4 5 23 1508 1526 1506 1526 0.96 7 13 1.1 90 3.9 5.4 3 23 1533 1554 1531 1554 0.93 8 13 0.12 9.6 7.0 0.2 2 23 1565 1585 1564 1585 0.96 9 13 4.6e-05 0.0037 17.7 0.4 1 19 1591 1609 1591 1613 0.95 10 13 2.9e-05 0.0023 18.4 0.4 1 23 1621 1643 1621 1643 0.98 11 13 8.7e-05 0.0069 16.9 7.6 1 23 1649 1671 1649 1672 0.96 12 13 0.00017 0.013 16.0 5.9 1 23 1677 1699 1677 1699 0.98 13 13 0.024 1.9 9.2 8.2 1 23 1705 1727 1705 1728 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTGCAGTGCCCCGTGTGCACTTTGTATCTGCACGCGGGCATGAATCTGTCCGATCATTTGGAGACCCATCCCAAGGAGCAGGTCATTAGGGCTTTGGTGCAAATGACCATCGTTGGCAATGGTGGAAATGGCAATGGCAATGGCATGGGTAGTGCTCTGGCGGCGGCCATGCTTGCCACATCTGGTGGCGATAATGCAACGACCACATCCGCCATGGCAGATGTTAAACCATCCCCGAAAACCTTGTCAATAGCAAAAGGATCCTCCTCCAGCGCTTCGTCGCCGGCAGAGACTGCAGCAACGTCTCAGTCAACGCTGCCACCACCTCCGCTATCGTCCTCCGTCACTGGCGGCGCAGGCGTCTCCACTAACAAGTTAAATAATCCACCGATTAAGGCAACAATGAAAAGCGCTCCGCCCATGCCCTCGACTCCAACGACTGAGGCGACATCAGCCAAATCCTCTGCACCCACCACAATATATCAGCCTTCATTGGCCCCAACAGAGTATGGCTATGATCAGCAGCAGCAGCAGCCACCTCAACCAGCCCCACAGCAACATGGCTTTCCGCGTGGAGCCACTGCCACCTTGGTTATACCACAAGTGCCGCAGCAACATTTTCTGGCCAGCCAACAGCAACAACAGGCACTTTTTGGCCACCAGACCCAGCAGACGCAGACGCAGCCGGGACTTAAATATGGAACCTATGGCAATACCTCGCTGCCGCCGCCACCGCCCTTGCAGATCTTCACCCAGCAGCAACAGCAGGGAGCAACGCAGTCTCAATCACATCAAAAACCCCCACCCGCCTATGGAGCAGCCATCACCAGTTGCTCCTCTTCCTCGTCGTCGTCATCGATTCGGGGGAATCGGCAAACAAATTCACCATTCGGAGCTCTCCTCAATGCGGCTGCTGCCGTGGCGTGCGCCGCTTCCTCATCATCGCAATCGCCGTCGGTTTTACGATATGCCGAATCCCCAGTTGCCCATTATTTGGAGCGGGAGAATGGCGATTTCATTGTCCAAGAGACGCCCAAGCACATTGTGGAATGCGTGGAGACGGAAGATGGTGAATTCTCAGTTATTGAACGCATATACCAATCGCCACCAAGTGTCCTGCATATCCACGACGAGGATGAAGATGAAGATGACGAGAATCTTGGTGGAAATGCCGACGACAATGAGGATGAGGGAGATTTTGTTAATAACGTTAGAAAAGATGAAGAGGATTTGACAGAAACATCCGATCATCATGTGGATCATGATGGTGACGATGAGCGGGAGGAGAATAGTCGTAGTCGAAATCTAACCAAAACCACAACGAAAAAGTCACGTAAATCCAAACCGAAACGAACTTCCAAGCAATTGCAGAGAACCACAGAGGAGGAGTTTATGAGCTTAAGCAGCGGGGAGGAGAGCGAGTCGGAAATCGCGGAGAGGCGAGAGCAAAAGAAATTGGAGGCGTCTCAGCCGCCACTCTGTACGGCTCCTTCCACGAGCACTGCGGCAGCTGCAGCCTCATCAGCAGCAGTTCCTTCACAAGCAACGGCTGCTGCTGCTGGTGCTGTTGGCTCCTCCAACATGACGGAAGGGAACTCTACGTCCACCAAGTCGAAAAAGAATCGCATTACTGTGCTCAGCGATGTCCCTCTTAATATGAACGAGTATCTTGATCTAATGGGCAACATTGTGGCCTCCAGTCGCATTGGGCAAGCTCGTCCATTTGCCGCTGTAGCTCCTATACCCCTGGTGAAAGTGGAAAAGGAAGAGCCCCTGGATGACTGTGACAATGAGAGTGTGGCGGAAGAATCTCAAGTGGAGCAGAAACCCAGCTTGGGCACCACCAGCGTAATACGTATGGCTAGCACCACCACCGCCACCACTACCGCCAGCGGCAGCAGTAGCCTTACAACTGCCGAAGATCTCACCCAGCCACCGCTTATGAAGATTGAGGTGGAGGCGACAGCATTGTTAGCTCCCCGCTTCTCGGCACCAGCACCGACCACCACGCAGCGTGGTCCCAAAAAGCTGGTCATCAAACCAAAGGCCACCTCGGCCACAACAACAACGAAAAAGACTGACACCCACACACTCCTCGATCCCCAACCATCTTCATCATCAACATCATCATCATCAGCGACATCTTCTTCCAACCAAATCATATCAAACGGAAATGCTAATCCCTCTGCTCCTGTCTCCTCGGAGATGGTGCAAATCAAGAGCGAGAATCTAGAGCCACCATCAACGAGTAGCAATAGCATATTGGAGAAGCATCTGACCAAGCGGAAGCATTCGACAGTCAATGATGATGATGCACGGGTTCTGCTCGAATTTGCCAATTCGAAACAGTCGCCGGCTTTGTCCAGTGGAGCTGCTTCGAATACAACATTTGTGGTAAACGCTGCAGTTTCCAGTTTCCCTTCTGCCGGATCTGTGTTTGCCAGCAGCAGCAGTACGCCAGCACCTAACCAGATTGCTCCCAATCCGGCCGATGAATACATCCTGCCGGACAATAATCTAGAGGTGGACGAAATTGTGATATCCTCCTCGTCTTCCTATGCCGCCTCATGCGTGTCACAACAGCTGCAGCACCAATCCCAGGTGCAGACCCAGACGCAGGCTTCCACCTCAATACATGATTTCAACTTTCTGTATCATCAGAACACAACACAGACCACGGCGGCCACATCAACGGCAGGGGGTAATGCCTATTTCACCCCCTTTGCCAGGCAACAGCAGCAGCCACATCATCATCATCATGGAACCACTAGTGAGGCCACCAATGCTGCCACTTTGGCCTCTTCTTCAAGCAATTCCTCGGCATTGGATCATGATTCAATGAATGCCACTTTCCGTGTAACAAAAACCCAATCCTCGCACTCGCACTCGTGGTATCATCCCGTGGAGCAGCAGCAGGCGCAAACATCGACGGCGGCAACGGCAGGATCTGGAGGAGGATCTGCTTCCGATTTGGCCCAGCCCACCAATTTTAATGCAGCTTTGGCTGCGGTGGACTGCTGCAGCGTTGCTGTTGATGGCGGAGATGTCAAGGCTTATCTAGATCTCGATGCCTGCAAGCGGGAACAGTTAAGCAACAGCAGCAATTTGCCATCAGTTTCCGCATCCACCACATCGTCGTCCTTTGCTGGTGCTGGCACAGAGAGCAGCTTGGTGGGTGGGCTCAATATACGCACCGATGAAAAAATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGTGACATTGAAAACTCATGGAGTCAGTCGATGTACGGTGACATATCACAGCGTTACTTTAGAAATCAATTCTCTGCCGGTTATAATACAGACTGGCGACAGGACTACTATCCAGCTCAGGATCTCAGCAGCGCCCAGCAACGGGAGCAAAAGCGATTCGATTTTAACGCAGTCGTCGACGAGGAGGCTTCGTCTTTATCGAGGAAGAGTTTACCCATACCCACCGCTTCCACCTCATCCTCAATATGCTCGGCTTTGCTGGCTGGTCCACCAATAGCCTCCACCTCCAGGGCGGCAGCTGAGGCAGCGGCCGAAGCCGCAGCAGCAGTGGCCGCAATGTCCCAGCAGCGTAAGCCACCGCCGCGTCGCAAAATTTACAAGTGTCCCCACTGTGAAGCCATCTTCGAGAAACTCAAGGAACGCAATGCGCACATGATTAGCGACCACAATTATGTGCGTCAGAATCGTCGCTTGATTTGCACTCAGCCGTTGGTCAGCGCATCGTCGTCGAGCATGTTGCCGCCACAGTCGCAGCAACAGACACAGCACCAGCCGATGTTGCATCAGCCGGATCTTGGACTCTTGCAGGAAGATTCGAAAGATGGCATTGTTAAGATCAAGCAGGAGCAGTGTCAGGATAAGCACGAAGCCGAGCAGCAGTTGTTGGACCATGCCGAATTGGCGGACATGAAGGACGCCGAACTGCTGGGTCATGCTGCTGGCTTGGATGGCGGCGACATAAAGCCACCAGGCGTGGGTGGTGATATGGATAATAAGCTGACTATACCGCCCTTGGCAATGACCACGCCTGCTGCTAAGTTGGCGGCCCTTTATCGGATGCTGATGGCCTACAACGAATCCAAGCTCGGTCAGGACCGCAACATTAGCGAACTGGAACAGAATGCCATGGAGAAGTCCATCTTTCTGTGCTATGTTTGCCGTACCGATTTCCCCACCGTCAAACTGTACGATGCCCATCTGACAGAACATCCTGCCGAATGTTTCACCTGTGGCAAGAAGTTCTATCGATGGAAGAACTTTTCGCTGCATCTAAAGCGACACTTGGGCTGGAAAGAGTTTGGTTGTTGTGTCTGTGACAAGAAGTTTGTGGTGCGCAGTGCTCTAGTGGAACACATGCGGATGCATACAGGCCAGACGCCGCTTAAGTGCAAAATTTGCGGCAAGAAATTCAAGCGCTACTCCAATTTGACGCAACACCGAAAGCGGCACACCAAAATGATGGTTCGCAAGAAGGAATACGTTTGCCATTGCGGTGAGGTTTTGCCCTCCAAGGCTCGATTCCTGTGGCACAAGGAGACCCACGATTTAAAACCGAAATGCTGTCCCTACTGTTGCGATCGATTCGTGCATGCCAATTCCCTGCGACGCCACATACGGCTGGCCCATTCGGACAAGTTTGACTATGCCGAGCCCATGGAGTGCCCCATGTGTAAACAAATCTTTGCCAAGACCTCCATCAAGGCTCACATGGCCACACATTCAACAGATCCGCAATACGACTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTTAAGATCCATTCATGGGTGCACGCCAATCGAACTGCCAAGCCCTTCAAGTGCGAGTACTGTCCCAAGGCGTTTGTCCGTGAACTGGACTTTAAGAACCACATCAATGCCCACAAACAGATTAAACCGTACACGTGCGAGTATTGCGGCTGCAAGTTCATACGGAAATACAACTATATGAGGCATCGGCGTGAGCATCATGGCAACAAGATGTTCACCTGTGATCAGTGTGACAAATCCTTCCATCGGCATTACTATTTGATCGAGCATCGTCGCATTCACACCGGTGAACGGCCCTTCCATTGCACCATTTGCGGCAAGAGCTCGACAACAAAAACCAATCACAACAAACATCTGAAGATCCATCACTCGCGCGATCCTTTCACCGTTGAGGTCTAG
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTIVGNGGNGNGNGMGSALAAAMLATSGGDNATTTSAMADVKPSPKTLSIAKGSSSSASSPAETAATSQSTLPPPPLSSSVTGGAGVSTNKLNNPPIKATMKSAPPMPSTPTTEATSAKSSAPTTIYQPSLAPTEYGYDQQQQQPPQPAPQQHGFPRGATATLVIPQVPQQHFLASQQQQQALFGHQTQQTQTQPGLKYGTYGNTSLPPPPPLQIFTQQQQQGATQSQSHQKPPPAYGAAITSCSSSSSSSSIRGNRQTNSPFGALLNAAAAVACAASSSSQSPSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETEDGEFSVIERIYQSPPSVLHIHDEDEDEDDENLGGNADDNEDEGDFVNNVRKDEEDLTETSDHHVDHDGDDEREENSRSRNLTKTTTKKSRKSKPKRTSKQLQRTTEEEFMSLSSGEESESEIAERREQKKLEASQPPLCTAPSTSTAAAAASSAAVPSQATAAAAGAVGSSNMTEGNSTSTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDCDNESVAEESQVEQKPSLGTTSVIRMASTTTATTTASGSSSLTTAEDLTQPPLMKIEVEATALLAPRFSAPAPTTTQRGPKKLVIKPKATSATTTTKKTDTHTLLDPQPSSSSTSSSSATSSSNQIISNGNANPSAPVSSEMVQIKSENLEPPSTSSNSILEKHLTKRKHSTVNDDDARVLLEFANSKQSPALSSGAASNTTFVVNAAVSSFPSAGSVFASSSSTPAPNQIAPNPADEYILPDNNLEVDEIVISSSSSYAASCVSQQLQHQSQVQTQTQASTSIHDFNFLYHQNTTQTTAATSTAGGNAYFTPFARQQQQPHHHHHGTTSEATNAATLASSSSNSSALDHDSMNATFRVTKTQSSHSHSWYHPVEQQQAQTSTAATAGSGGGSASDLAQPTNFNAALAAVDCCSVAVDGGDVKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSAGYNTDWRQDYYPAQDLSSAQQREQKRFDFNAVVDEEASSLSRKSLPIPTASTSSSICSALLAGPPIASTSRAAAEAAAEAAAAVAAMSQQRKPPPRRKIYKCPHCEAIFEKLKERNAHMISDHNYVRQNRRLICTQPLVSASSSSMLPPQSQQQTQHQPMLHQPDLGLLQEDSKDGIVKIKQEQCQDKHEAEQQLLDHAELADMKDAELLGHAAGLDGGDIKPPGVGGDMDNKLTIPPLAMTTPAAKLAALYRMLMAYNESKLGQDRNISELEQNAMEKSIFLCYVCRTDFPTVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00618606; iTF_00523925;
- 90% Identity
- iTF_00571353;
- 80% Identity
- -