Dins008318.1
Basic Information
- Insect
- Drosophila insularis
- Gene Symbol
- -
- Assembly
- GCA_018903935.1
- Location
- JAEIFP010002295.1:12909854-12915688[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0041 0.32 11.6 0.5 1 23 1217 1240 1217 1240 0.97 2 13 4.6 3.7e+02 1.9 0.2 1 23 1399 1421 1399 1421 0.91 3 13 0.00015 0.011 16.1 2.7 2 23 1424 1445 1424 1445 0.97 4 13 9.4e-05 0.0074 16.7 0.9 3 23 1453 1473 1451 1473 0.98 5 13 4.7e-07 3.7e-05 24.0 4.1 2 23 1480 1501 1479 1501 0.97 6 13 4.4 3.5e+02 2.0 0.4 5 23 1514 1532 1512 1532 0.96 7 13 1.1 87 3.9 5.4 3 23 1539 1560 1537 1560 0.93 8 13 0.12 9.2 7.0 0.2 2 23 1571 1591 1570 1591 0.96 9 13 4.5e-05 0.0035 17.7 0.4 1 19 1597 1615 1597 1619 0.95 10 13 2.8e-05 0.0022 18.4 0.4 1 23 1627 1649 1627 1649 0.98 11 13 8.4e-05 0.0066 16.9 7.6 1 23 1655 1677 1655 1678 0.96 12 13 0.00016 0.013 16.0 5.9 1 23 1683 1705 1683 1705 0.98 13 13 0.029 2.3 8.9 7.1 1 23 1711 1733 1711 1734 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTGCAGTGCCCCGTGTGCACTTTGTATCTGCATGCGGGCATGAATCTGTCCGATCATTTGGAGACCCATCCCAAGGAGCAGGTCATTAAGGCATTGGTGCAAATGACCATCGTCGGCAATGGTGGGAATGGCAATGGCATGGGCAGTGCTTTGGCGGCGGCAATGCTTGCCACATCCGCTGGCGATAATGCAACGGACCCACCATCCGCCCCGGGGGATGTTAAGCCATCCACGAAAACGTTGCCAATTTCAAAAGGCTCGTCCTCCTCCTCCTCCAGCTCCACCGCTTCGTCGCCGGCAGCGACTGCAGCAACGTCTCAGTCTACGCTGCCACCACCTCCGCTATCGTCCTCCGTCACTGGCAACGCCGGCGTTTCCACTAACAAATTAAATAATCCACCGATTAAGGCAACACTGAAAAGCGCTCCGCCCATGCCCTCGACTCCAACGACTGAGGCATCATCAGCCAAACCCTCTGCACCCACCACCACCACAATATATCAGCCTCCATTGGCCCCAACAGAGTTTAGCTATGATCAGCAGCAGCAGCAGCCACCACCAGCACAACCAGCTCCACAGCAACATGGTTTTCCGCGTGGAGCCACTGCCACCTTGGTTATACCACAAGTGCCGCAGCAACATTTTCTGGCCAGCCAACAGCAACAACAACAACAACAGACACTGTTTGCTCATCAGACCCAGCAGACGCAGTCGCAGCCGGGCCTTAAATATGGAACCTATGGCAATGCCTCGCTGCCACCGCCACCGCCCTTGCAGATCTTCACCCAGCAGCAACAGCAGGGAGCAACGCCGTCTCAATCACACCAGAAACCCCCACCCGCCTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAACAGCAGCAGCAGCAGCAGCACCACCATCATCATCTTAATATGCACCACAATATAACCTTGGCACCACCGACCAACACCAACTCAACCACCAATGGAGCTGGCAAACAGCAGGCTAGCAAAGTTCTTACAGAACCAGTTGCTCCTCATCCTCCTGCTGCCGTGGCCTGCGCCGCCTCCTCATCATCGCCGTCGCCGTCGGTTTTGCGATATGCCGAATCCCCAGTTGCCCATTATTTGGAGCGCGAAAATGGTGATTTCATTGTCCAAGAGACACCCAAGCATATTGTGGAATGTGTGGAGACGGAGGATGGTGAATTTTCAGTGATTGAACGTATATATCAGTCGCCGCCGAGTGTCCTGCATATCCACGACGAGGACGAAGATGAAGATGACGAGAATCTTGGTGGAAATGCGGACGACAATGAGGATGAGGAAGATTTTGTTGACAATGTTAGAAAAGATGAGGAGGATTTGACAGAAACCTCCGATCATCATGTGGATCATGATGGTGATGACGAGCGGGAGGAGAATAGTCGTAGTCGAAATCTAAGCAAAACCACAACGAAAAAATCACGTAAATCAAAACCGAAACGAACTGCCAAGCAAATGCAGAGAACCACAGAGGAGGAGTTCATGAGCTTAAGCAGCGGGGAGGAGAGCGATTCGGAAAAGGCCGAGAGGCGAGAGCAGAAGAAATTGGAGGCTACTCAACCGCCTCTATGCAATTCCACTTCGACCAAATCGAAAAAGAATCGCATTACTGTGCTGAGCGATGTTCCTCTTAATATGAACGAGTATCTTGATTTAATGGGCAACATTGTGGCCTCCAGTCGCATTGGACAAGCTCGTCCATTTGCAGCTGTAGCTCCCATACCCCTGGTGAAAGTGGAAAAGGAAGAGCCCCTTGATGACTATGACAATGAGAGTGTGGCGGAAGAACCTCAAGTGGAGCAGAAACCCAGTTTGGGCACCACCAGCGTTATCCGTATGGCTAGCACCACCACCACCACCAACGCCACCACTACCGCCGAAGATCTCACCCAGCCACCGCTTATGAAGATTGAGGTGGAGGCGACCACATTGTTGGCACCCCGCTTCTCGGCACCAGCACCCACCACCACCCAGCGTGGTCCCAAAAAGCTGGTCATCAAACCAAAGGCCACCTCGGCCACGACAACAACGAAAAAGACTGACACCCACACACTCCTCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCAAATCATATCAAATGTAAATGCCAATCCCTCTGCTCCTGCCGCCTCGGAGATGGTGCAAATCAAGAGCGAAAATCTAGAGCCACCGTCAACGAGTAGCAATAGCATATTGGAGAAGCATCTGACCAAGCGGAAGCATTCGACAGTTAATGATGATGATGCCCGGGTACTGCTCGAATTTGCCAATTCCAAACAGTCGCCGGCTCTGTCCGGTGGAGCTGCATCGAATACAACATTTGTGGTAAACGCCGCAGCCTCCAGTTTCCCTTCGGCCGGATCTGTGTTTGCCAGCAGCAGCAGCAGCAATACGTCGGCCCCTAACCAGATTGCTCCCAATCCGGCCGATGAATACATTCTGCCGGACAATAATCTAGAGGTGGACGAAATTGTGATATCCTCTTCGTCTTCCTTTGCAGCCTCATGCGCCTCACAACAACTGCAGAACCAATCCCAAGTGCAGACCCAGACGCAGGCTTCCACCTCGATACAAGACTTTAACTTTTTGTATCATCAGAACACAACGCAGACCACAGCGGCCACTTCAGCGGTTGGGGGTAATGCTTATTTCACTCCCTTTGCCAGGCAACAGCAGCAGCAGCCACATCATCATCATCATCATAATCTTGGAACCACAAGTGAGGCTACCAATGCTGCCACTTTGGCCTCTTCTTCAAGCAATTCCTCGGCATTAGATCATGATTCAATGAATGCCACTTTCCGTGTAACAAAAACACAATCCTCGCACTCGCACTCGTGGTATCATCCCGTGCAGCAACAGCAGGCACAGACATCGACGGCGGCAACGGCAGGATCCGGGGGAGGCTCTGCTTCCGATTTGGCCCAGCCCACTAATTTTAATGCAGCTTTGGCTGCGGTGGACTGCTGCAGCGTTGCTGTCGATGGCGGAGATGTCAAGGCATATCTGGATCTCGATGCCTGCAAGCGGGAACAGTTGAGTAACAGCAGCAATTTGCCATCAGTTTCTGCATCCACCACATCGTCATCGTTTGCTGGTGCCGGCACCGAGAGCAGCTTGGTGGGAGGTCTCAATATACGCACCGATGAGAAAATGCCCGCCAAGGGTGAGATCTCTGAGCAGGAGAGCAACTGTGACATTGAAAACTCCTGGAGTCAGTCGATGTACGGTGACATATCACAGCGTTACTTTAGAAATCAATTCTCTGCCGGTTATAATACCGACTGGCGACAGGACTACTATCCAGCTCAGGATCTCAGCAGCGCCCAGCAACGAGAGCAAAAGCGATTCGATTTTAATGCAGTCGTCGACGAGGAGGCTTCGTCTATATCGAGGAAGAGTTTACCCATACCCACCGCTTCCACCTCATCCTCAATATCCTCGGCATTGCTGGCTGGTCCACCAATAGCCTCCACCTCCAGGGCGGCAGCTGAGGCAGCGGCCGAAGCAGCAGCCGCAGTGGCTGCCATGGCCCAGCAGCGTAAGCCACCGCCGCGCCGCAAGATCTACAAGTGCCCACACTGTGAAGCCATCTTCGAGAAACTCAAGGAACGCAATGCCCACATGATAAGCGACCACAACTATGTGCGTCAGAATCGTCGCTTGATATGCACTCAGCCGTTGGTCAGCGCGTCGTCGTCGAGCATGTTGCCGCCACAGTCGCAGCAGCAGACCCAGCACCAGCCGATGCTGCATCAGCCGGATCATGGACTCTTGCAGGAAGATTCCAAAGACGGCATTGTTAAGATCAAGCAGGAGCAGTGTCAGGATAAGCACGAAGCCGAGCAGCAGTTGTTGGACCATGCCGAATTGGCTGACATGAAGGATGCCGAACTACTGGGCCATGCTGCTGGCTTGGATGGTGGCGACATAAAGCCACCGGGCGTGGTTGGTGATCTCGATAATAAGCTAACTATACCGCCTTTGGCAATGACCACGCCTGCTGCCAAATTGGCAGCCCTGTATCGCATGCTGATGGCCTACAACGAATCCAAATTGGGTCAGGAACGCAACATTAGCGAACTGGAACAGAATGCCATGGAGAAGTCCATCTTTCTGTGCTATGTTTGCCGTACCGATTTCCCCACCGTCAAGCTGTACGATGCCCATCTCACAGAACATCCTGCTGAATGTTTCACCTGTGGCAAAAAGTTTTATCGTTGGAAGAACTTTTCGTTGCATCTCAAGCGACACTTGGGCTGGAAAGAGTTTGGTTGTTGCGTCTGTGACAAGAAGTTTGTAGTGCGCAGTGCTTTAGTGGAACACATGCGGATGCACACAGGCCAGACGCCGCTCAAGTGCAAAATTTGTGGTAAGAAATTCAAACGCTACTCCAATTTGACACAGCACCGAAAGCGACACACCAAAATGATGGTTCGCAAGAAGGAATATGTCTGCCATTGCGGTGAGGTTTTGCCATCCAAGGCACGATTCCTTTGGCACAAGGAGACCCACGATTTGAAACCGAAATGCTGTCCCTACTGTTGCGATCGGTTCGTTCACGCCAATTCCCTGCGACGCCACATACGGCTGGCCCATTCGGACAAGTTTGACTATGCCGAGCCCATGGAGTGCCCCATGTGTAAACAAATCTTTGCCAAGACCTCCATCAAGGCCCACATGGCCACACATTCAACGGATCCGCAATACGACTGCGCCATCTGCAACAAGAGCTTCTCAACCAAATGGAATCTTAAGATCCATTCATGGGTGCATGCCAATCGCACTGCCAAGCCCTTCAAGTGCGAGTATTGTCCCAAGGCGTTTGTTCGTGAACTGGACTTTAAGAACCACATCAATGCCCATAAACAGATCAAACCATATACGTGCGAGTATTGCGGCTGCAAGTTCATACGGAAATACAACTATATGAGGCATCGGCGTGAGCATCATGGCAACAAGATGTTCACCTGTGATCAGTGTGACAAATCCTTCCATCGGCATTACTATTTAATCGAGCATCGTCGCATCCACACTGGTGAACGGCCCTTCCATTGCACCATTTGCGGCAAGAGTTCGGCAACAAAAACCAATCACAACAAACATCTGAAGATCCATCACTCGCGCGATCCTTTCACCGTGGAGGTCTAG
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNGGNGNGMGSALAAAMLATSAGDNATDPPSAPGDVKPSTKTLPISKGSSSSSSSSTASSPAATAATSQSTLPPPPLSSSVTGNAGVSTNKLNNPPIKATLKSAPPMPSTPTTEASSAKPSAPTTTTIYQPPLAPTEFSYDQQQQQPPPAQPAPQQHGFPRGATATLVIPQVPQQHFLASQQQQQQQQTLFAHQTQQTQSQPGLKYGTYGNASLPPPPPLQIFTQQQQQGATPSQSHQKPPPAYGAAISQIRSQHNQNKQQQQQQHHHHHLNMHHNITLAPPTNTNSTTNGAGKQQASKVLTEPVAPHPPAAVACAASSSSPSPSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETEDGEFSVIERIYQSPPSVLHIHDEDEDEDDENLGGNADDNEDEEDFVDNVRKDEEDLTETSDHHVDHDGDDEREENSRSRNLSKTTTKKSRKSKPKRTAKQMQRTTEEEFMSLSSGEESDSEKAERREQKKLEATQPPLCNSTSTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDYDNESVAEEPQVEQKPSLGTTSVIRMASTTTTTNATTTAEDLTQPPLMKIEVEATTLLAPRFSAPAPTTTQRGPKKLVIKPKATSATTTTKKTDTHTLLDXXXXXXXXXXXXXXXXNQIISNVNANPSAPAASEMVQIKSENLEPPSTSSNSILEKHLTKRKHSTVNDDDARVLLEFANSKQSPALSGGAASNTTFVVNAAASSFPSAGSVFASSSSSNTSAPNQIAPNPADEYILPDNNLEVDEIVISSSSSFAASCASQQLQNQSQVQTQTQASTSIQDFNFLYHQNTTQTTAATSAVGGNAYFTPFARQQQQQPHHHHHHNLGTTSEATNAATLASSSSNSSALDHDSMNATFRVTKTQSSHSHSWYHPVQQQQAQTSTAATAGSGGGSASDLAQPTNFNAALAAVDCCSVAVDGGDVKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSAGYNTDWRQDYYPAQDLSSAQQREQKRFDFNAVVDEEASSISRKSLPIPTASTSSSISSALLAGPPIASTSRAAAEAAAEAAAAVAAMAQQRKPPPRRKIYKCPHCEAIFEKLKERNAHMISDHNYVRQNRRLICTQPLVSASSSSMLPPQSQQQTQHQPMLHQPDHGLLQEDSKDGIVKIKQEQCQDKHEAEQQLLDHAELADMKDAELLGHAAGLDGGDIKPPGVVGDLDNKLTIPPLAMTTPAAKLAALYRMLMAYNESKLGQERNISELEQNAMEKSIFLCYVCRTDFPTVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSATKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503447;
- 90% Identity
- -
- 80% Identity
- -