Dpau011334.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- -
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000805.1:10593329-10599136[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0046 0.36 11.5 0.5 1 23 1320 1343 1320 1343 0.97 2 13 5.2 4.1e+02 1.9 0.2 1 23 1502 1524 1502 1524 0.91 3 13 0.00016 0.013 16.0 2.7 2 23 1527 1548 1527 1548 0.97 4 13 0.00011 0.0082 16.6 0.9 3 23 1556 1576 1554 1576 0.98 5 13 5.3e-07 4.1e-05 23.9 4.1 2 23 1583 1604 1582 1604 0.97 6 13 5 3.9e+02 1.9 0.4 5 23 1617 1635 1615 1635 0.96 7 13 1.2 96 3.8 5.4 3 23 1642 1663 1640 1663 0.93 8 13 0.13 10 6.9 0.2 2 23 1674 1694 1673 1694 0.96 9 13 5.1e-05 0.0039 17.6 0.4 1 19 1700 1718 1700 1722 0.95 10 13 3.2e-05 0.0025 18.3 0.4 1 23 1730 1752 1730 1752 0.98 11 13 9.5e-05 0.0074 16.8 7.6 1 23 1758 1780 1758 1781 0.96 12 13 0.00018 0.014 15.9 5.9 1 23 1786 1808 1786 1808 0.98 13 13 0.026 2 9.1 8.2 1 23 1814 1836 1814 1837 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTGCAGTGCCCCGTGTGCACTTTGTATCTGCACGCGGGCATGAATCTGTCCGATCATTTGGAGACACATCCCAAGGAGCAGGTCATTAGGGCTTTGGTGCAAATGACCATCGTTGGCAATGGTGGGAATGGCAATGGCAATGGCATGGGTAGTGCTCTGGCGGCGGCCATGCTTGCCACATCCGGTGGCGATAATGCAACAACCTCATCCGCCATGGCAGATGTTAAACCATCCCCGAAAACCTTGGCAATAGCAAAAGGCTCCTCCTCCACCTCCACCGCTTCGTCGCCGGCAGAGACTGCAGCAACGTCTCAGTCAACGCTGCCACCACCTTCGCTATCGTCCTCCGTCACTGGCGGCGCAGGCGTCTCCACTAACAAATTAAATAATCCACCGATTAAGGCAACACTGAAAAGCCCTTCGCCCATGCCCTCGACTCCAACGACTGAGGCGACATCAGCCAAATCCTCTGCACCCACCACAATATATCAGCCTTCATTGGCCCCAACAGAGTATGGCTATGATCAGCAGCAGCAGCAGCCACCACAACCAGCCCCACAGCAACATGGTTTTCCGCGTGGAGCCACTGCCACCTTGGTTATACCACAAGTGCCGCAGCAACATTTTCTGGCCAGCCAACAGCAACAACAGGCACTTTTTGGCCACCAGACCCAGCAGACGCAGACGCAGCCGGGACTTAAATATGGAACCTATGGCAATACCTCGCTGCCGCCGCCACCGCCCTTGCAGATCTTCACCCAGCAGCCACAGCAGGGAGCAACGCAGTCTCAATCACATCAAAAACCCCCACCCGCCTATGGAGCAGCCATCAGTCAAATTCGATCTCAGCACAACCAAAACAAACAGCAGCAGCAGCAGCACCATCATCATCTTAATATGCACCACAATGTAACCTTGGCACCACCGACCAACACCAACCCAACCACCAATGGAGCTGGCAAACAGCAGGCTAGCAAAGTTCTAACGGAAGTATTTCTCAATCCACCTCCTCCGCCGCCGCCGCCGCCGCAACAGCCAGCCTCTGGACAAGCACAGCATCACCAACACCACCACCACCACCACCAGCATCATCATCCTCCTCACCAGCACCATCAGCAGCAGCAACAGCAACAACAAACACATCAAGTGTTGTTGGCAGCCAGTTGCTCCTCTTCCTCGTCGTCGTCATCGATTCGGGGGAATCGGCAAACAAATTCACCATTCGGAGCTCTCCTCAATGCGGCTGCTGCCGTGGCGTGCGCCGCTTCCTCATCATCGCAATCGCCGTCGGTCTTACGATATGCCGAATCCCCAGTTGCTCATTATTTGGAGCGGGAGAATGGCGATTTCATTGTCCAAGAGACGCCCAAGCACATTGTGGAATGCGTGGAGACGGAAGATGGTGAATTCTCAGTTATTGAACGTATATACCAATCGCCACCAAGTGTCCTCCATATCCACGACGAGGATGAAGATGAAGATGACGAGAATCTTGATGGAAATGCCGACGACAATGAGGATGAGGAAGATTTTGTCGATAACGTTAGAAAAGATGAAGAGGATTTGACAGAAACATCCGATCATCATGTGGATCATGATGGTGACGATGAGCGGGAGGAGAATAGTCGTAGTCGAAATCTAAGCAAAACCACAACGAAAAAGTCACGTAAATCCAAACCGAAACGAACCTCCAAGCAATTGCAGAGAACCACAGAGGAGGAGTTCATGAGCTTAAGCAGCGGGGAGGAGAGCGAGTCGGAAATCGCGGAGAGGCGAGAGCAAAAGAAATTAGAGGCTTCTCTGCCGCCACTCTGTACGGCTCCTTCCACGAGCACTGCGGCAGCTGCAGCATCATCAGCAGCAGTTCCTTCAACCGCTACGGCTGTTGCTGCTGCTGTTGGCTCCTCTAACACGACGGAAGGAAACTCTACGTCCACCAAGTCGAAAAAGAATCGCATTACTGTGCTCAGCGATGTTCCTCTTAATATGAACGAGTATCTTGATCTAATGGGCAACATTGTGGCCTCCAGTCGCATTGGGCAAGCTCGTCCATTTGCCGCTGTAGCTCCCATACCCCTGGTGAAAGTGGAAAAGGAAGAGCCCCTGGATGATTACGACAATGAGAGTGTGGCGGAGGAACCTCAAGTGGAGCAGAAACCCAGCTTGGGCACCACCAGCGTAATACGTATGGCTAGCACCACCACCGCCACCAATACCGCCAGCGGCAGCAGTAGCCTGACAACTGCCGAAGATCTCACCCAGCCACCGCTTATGAAGATTGAGGTGGAGGCGACAACATTGTTAGCACCCCGCTTCTCGGCACCAGCACCGACCACCACGCAGCGTGGTCCCAAAAAGCTGGTCATCAAACCAAAGGCCACCTCGGCCACGACAACAACGAAAAAGACTGACACCCACACACTCCTCGATCCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCCAACCAAATCATATCAAACGGAAATACTAATCCCTCTGCTCCTGTCCCCTCGGAGATGGTGCAAATCAAGAGCGAGAATCTAGAGCCACCATCAACGAGTAGCAATAGCATATTGGAGAAGCATCTGACCAAGCGGAAGCATTCGACTGTCAATGATGATGATGCACGGGTACTGCTCGAATTTGCCAATTCGAAACAGTCGCCGGCTTTGTCCGGAGGAGCTGCCTCGAATACAACATTTGTGGTAAACGCTGCAGTTTCCAGTTTCCCTTCTGCCGGATCTGTGTTTGCCAGCAGCAGCAGTACGCCAGCACCTAACCAGATTGCTCCCAATCCGGCCGATGAATACATCCTGCCGGACAATAATCTAGAGGTGGACGAAATTGTGATATCCTCCTCGTCTTCCTATGCTGCCTCATGTGCGTCACAACAGCTGCAGCACCAATCCCAGGTGCAGACGCAGACGCAGGCTTCCACCTCCATACATGATTTCAACTTTCTGTATCATCAGAACACAACGCAGACCACGGCGGCCACATCAACGGCAGGGGGTAATGCCTATTTCACCCCCTTTGCCAGGCAACAGCAGCAGCCACATCATCATCATCATGGAACCACTAGTGAGGCCACCAATGCTGCCACTTTGGCCTCTTCTTCAAGCAATTCCTCGGCATTAGATCATGATTCAATGAATGCCACTTTCCGTGTAACAAAAACCCAATCCTCGCACTCGCACTCGTGGTATCATCCCGTGCAGCAGCAGCAGGCACAGACATCGACGGCGGCAACAGCAGGATCTGGAGGAGGCTCTGCTTCCGATTTGGCCCAGCCCACCAATTTTAATGCAGCTTTGGCTGCGGTGGACTGCTGCAGCGTTGCTATTGATGGCGGAGATGTCAAGGCTTATCTGGATCTCGATGCCTGCAAGCGGGAACAGTTGAGCAACAGCAGCAATTTGCCATCAGTTTCCGCATCCACCACATCGTCGTCCTTTGCTGGTGCTGGCACAGAGAGCAGCTTGGTGGGTGGTCTTAATATACGCACCGATGAAAAAATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGTGACATTGAAAACTCATGGAGTCAGTCGATGTACGGTGACATATCACAGCGTTACTTTAGAAATCAATTCTCTGCCGGTTATAATACAGACTGGCGACAGGACTACTATCCAGCTCAGGATCTCAGCAGCGCCCAGCAACGGGAGCAAAAGCGATTCGATTTTAACGCAGTCGTCGACGAGGAGGCTTCGTCTTTATCGAGGAAGAGTTTACCGATACCCACCGCTTCCACCTCATCCTCAATATGCTCGGCTTTGCTGGCTGGTCCACCAATAGCCTCCACCTCCAGGGCGGCAGCTGAGGCAGCGGCCGAAGCCGCAGCGGCAGTGGCCGCAATGGCTCAGCAGCGTAAGCCACCGCCGCGTCGCAAGATCTACAAGTGTCCCCACTGTGAAGCCATCTTCGAGAAACTCAAGGAACGCAATGCGCACATGATTAGCGACCACAACTATGTGCGTCAGAATCGTCGCTTGATTTGCACTCAGCCGTTGGTCAGCACATCATCGTCGAGCATGTTGCCGCCACAGTCGCAGCAGCAGACACAGCACCAGCCGATGTTGCATCAGCCGGATCTTGGACTCCTGCAGGAAGATTCGAAAGATGGTATTGTTAAGATCAAGCAGGAGCAGTGTCAGGATAAGCACGAAGCCGAGCAGCAGTTGTTGGACCATGCCGAATTGGCGGACATGAAGGACGCCGAACTGCTGGGTCATGCTGCTGGCTTGGATGGCGGCGACATAAAGCCACCAGGCGTGGGTGGTGATATGGATAATAAGCTGACTATACCACCCTTGGCAATGACCACGCCTGCTGCCAAATTGGCGGCCCTTTATCGCATGCTGATGGCCTACAACGAATCCAAGCTCGGTCAGGACCGCAACATTAGCGAACTGGAACAGAATGCCATGGAGAAGTCCATCTTTCTGTGCTATGTTTGCCGTACCGATTTCCCCACCGTCAAATTGTACGATGCCCATCTGACAGAACATCCTGCCGAATGTTTCACCTGTGGGAAGAAGTTCTATCGATGGAAGAACTTTTCACTGCATCTAAAACGACACTTGGGCTGGAAAGAGTTTGGTTGTTGCGTCTGTGACAAGAAGTTTGTGGTGCGCAGTGCTCTAGTGGAACACATGCGGATGCATACAGGCCAGACGCCGCTCAAGTGCAAAATTTGCGGCAAGAAATTCAAGCGCTACTCCAATTTGACGCAACACCGTAAGCGGCACACCAAAATGATGGTTCGCAAAAAGGAATACGTTTGCCATTGCGGTGAGGTTTTGCCCTCCAAGGCGCGATTCCTGTGGCACAAGGAGACCCACGATTTAAAACCGAAATGCTGTCCCTACTGTTGCGATCGATTCGTACATGCCAATTCCCTGCGACGCCACATACGGCTGGCCCATTCGGACAAGTTTGACTATGCCGAGCCCATGGAGTGCCCCATGTGTAAACAAATCTTTGCCAAGACCTCCATCAAGGCTCACATGGCCACACATTCAACAGATCCGCAATACGACTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTTAAGATCCATTCATGGGTGCACGCCAATCGCACTGCCAAACCCTTCAAGTGCGAGTACTGTCCCAAGGCGTTTGTCCGTGAACTGGACTTCAAGAACCACATCAATGCCCACAAACAGATCAAACCGTACACGTGCGAGTATTGCGGCTGCAAGTTCATACGGAAATACAACTATATGAGGCATCGGCGTGAGCATCATGGCAATAAGATGTTCACGTGTGATCAGTGCGACAAATCCTTCCATCGGCATTACTATTTGATCGAGCATCGTCGCATTCACACCGGTGAACGGCCCTTCCATTGCACCATTTGCGGCAAGAGCTCGACAACAAAAACCAATCACAACAAACATCTGAAGATCCATCACTCGCGCGATCCTTTCACCGTTGAGGTCTAG
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTIVGNGGNGNGNGMGSALAAAMLATSGGDNATTSSAMADVKPSPKTLAIAKGSSSTSTASSPAETAATSQSTLPPPSLSSSVTGGAGVSTNKLNNPPIKATLKSPSPMPSTPTTEATSAKSSAPTTIYQPSLAPTEYGYDQQQQQPPQPAPQQHGFPRGATATLVIPQVPQQHFLASQQQQQALFGHQTQQTQTQPGLKYGTYGNTSLPPPPPLQIFTQQPQQGATQSQSHQKPPPAYGAAISQIRSQHNQNKQQQQQHHHHLNMHHNVTLAPPTNTNPTTNGAGKQQASKVLTEVFLNPPPPPPPPPQQPASGQAQHHQHHHHHHQHHHPPHQHHQQQQQQQQTHQVLLAASCSSSSSSSSIRGNRQTNSPFGALLNAAAAVACAASSSSQSPSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETEDGEFSVIERIYQSPPSVLHIHDEDEDEDDENLDGNADDNEDEEDFVDNVRKDEEDLTETSDHHVDHDGDDEREENSRSRNLSKTTTKKSRKSKPKRTSKQLQRTTEEEFMSLSSGEESESEIAERREQKKLEASLPPLCTAPSTSTAAAAASSAAVPSTATAVAAAVGSSNTTEGNSTSTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGQARPFAAVAPIPLVKVEKEEPLDDYDNESVAEEPQVEQKPSLGTTSVIRMASTTTATNTASGSSSLTTAEDLTQPPLMKIEVEATTLLAPRFSAPAPTTTQRGPKKLVIKPKATSATTTTKKTDTHTLLDPQXXXXXXXXXXXXSSNQIISNGNTNPSAPVPSEMVQIKSENLEPPSTSSNSILEKHLTKRKHSTVNDDDARVLLEFANSKQSPALSGGAASNTTFVVNAAVSSFPSAGSVFASSSSTPAPNQIAPNPADEYILPDNNLEVDEIVISSSSSYAASCASQQLQHQSQVQTQTQASTSIHDFNFLYHQNTTQTTAATSTAGGNAYFTPFARQQQQPHHHHHGTTSEATNAATLASSSSNSSALDHDSMNATFRVTKTQSSHSHSWYHPVQQQQAQTSTAATAGSGGGSASDLAQPTNFNAALAAVDCCSVAIDGGDVKAYLDLDACKREQLSNSSNLPSVSASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFSAGYNTDWRQDYYPAQDLSSAQQREQKRFDFNAVVDEEASSLSRKSLPIPTASTSSSICSALLAGPPIASTSRAAAEAAAEAAAAVAAMAQQRKPPPRRKIYKCPHCEAIFEKLKERNAHMISDHNYVRQNRRLICTQPLVSTSSSSMLPPQSQQQTQHQPMLHQPDLGLLQEDSKDGIVKIKQEQCQDKHEAEQQLLDHAELADMKDAELLGHAAGLDGGDIKPPGVGGDMDNKLTIPPLAMTTPAAKLAALYRMLMAYNESKLGQDRNISELEQNAMEKSIFLCYVCRTDFPTVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCCVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKMFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00503447;
- 80% Identity
- -