Basic Information

Insect: Drosophila equinoxialis
Gene Symbol: -
Assembly: GCA_018150345.1
Location: JAECWI010000938.1:1360922-1367960[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2e-05 0.0016 18.9 2.1 1 23 176 198 176 198 0.97

2 18 6.6e-06 0.00053 20.4 0.4 1 23 204 226 204 226 0.97

3 18 0.00098 0.078 13.6 0.9 1 23 232 254 232 254 0.95

4 18 1.4e-05 0.0011 19.4 3.1 1 23 260 282 260 282 0.97

5 18 3.2e-05 0.0026 18.2 4.7 1 23 288 310 288 310 0.99

6 18 5.8e-05 0.0047 17.4 5.7 1 23 316 338 316 338 0.97

7 18 2.9e-07 2.3e-05 24.7 4.3 1 23 344 366 344 366 0.98

8 18 1e-07 8.2e-06 26.1 2.4 1 23 372 394 372 394 0.97

9 18 6e-05 0.0048 17.4 6.7 1 23 401 423 401 423 0.97

10 18 0.0001 0.0083 16.6 6.5 1 23 429 451 429 451 0.98

11 18 9.3e-06 0.00074 19.9 4.5 1 23 457 479 457 479 0.98

12 18 6.7e-06 0.00054 20.4 8.1 1 23 485 507 485 507 0.98

13 18 5.5e-06 0.00044 20.6 7.6 1 23 513 535 513 535 0.97

14 18 6.1e-07 4.9e-05 23.6 7.7 1 23 541 563 541 563 0.98

15 18 0.00019 0.015 15.8 9.5 1 23 569 592 569 592 0.95

16 18 6.8e-05 0.0054 17.2 0.9 1 23 598 620 598 620 0.98

17 18 0.00072 0.058 14.0 4.4 1 23 630 652 630 652 0.98

18 18 8.5e-06 0.00068 20.1 1.6 1 23 658 681 658 681 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2e-05	0.0016	18.9	2.1	1	23	176	198	176	198	0.97
2	18	6.6e-06	0.00053	20.4	0.4	1	23	204	226	204	226	0.97
3	18	0.00098	0.078	13.6	0.9	1	23	232	254	232	254	0.95
4	18	1.4e-05	0.0011	19.4	3.1	1	23	260	282	260	282	0.97
5	18	3.2e-05	0.0026	18.2	4.7	1	23	288	310	288	310	0.99
6	18	5.8e-05	0.0047	17.4	5.7	1	23	316	338	316	338	0.97
7	18	2.9e-07	2.3e-05	24.7	4.3	1	23	344	366	344	366	0.98
8	18	1e-07	8.2e-06	26.1	2.4	1	23	372	394	372	394	0.97
9	18	6e-05	0.0048	17.4	6.7	1	23	401	423	401	423	0.97
10	18	0.0001	0.0083	16.6	6.5	1	23	429	451	429	451	0.98
11	18	9.3e-06	0.00074	19.9	4.5	1	23	457	479	457	479	0.98
12	18	6.7e-06	0.00054	20.4	8.1	1	23	485	507	485	507	0.98
13	18	5.5e-06	0.00044	20.6	7.6	1	23	513	535	513	535	0.97
14	18	6.1e-07	4.9e-05	23.6	7.7	1	23	541	563	541	563	0.98
15	18	0.00019	0.015	15.8	9.5	1	23	569	592	569	592	0.95
16	18	6.8e-05	0.0054	17.2	0.9	1	23	598	620	598	620	0.98
17	18	0.00072	0.058	14.0	4.4	1	23	630	652	630	652	0.98
18	18	8.5e-06	0.00068	20.1	1.6	1	23	658	681	658	681	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTAAGCGCTGCCAGTTCGGTACCATCGGTAATTGCACCGGTGGTTACCACTGGAGGCACCACCATTACCTTGGGCGGTGGACCACCACCGCCATCCTCATCATTGGCCAAATCGGAGATTAAAGAAGATGGCAAACCGCCGCATGGCATGGAATTGTATAAAGTGAACATTGAGGATATTTCGCAATTGTTTACATATCATGAAGTCTTTGGCAAAATACATGGAGATGTTGTCAATCATCAATTGGTGGCAGCGGCTCATGGTGGACAATTGCCACCGCCTCCACCTGTGGGCGGTGGTGGGATACCCGGAGTAGTTACAACCACAACAAGCTCATCCACCGGAAGCAGTGGCGGCGCTGGTGGTGCCGCCGGCGGGGGTACCACATCGAGCACAACGGGTGAGTTGCTTATGCCTAAAATGGAGGGCGGCCTACATGGCAACGTGGACGCTGGTGGCGGCGGTCAAACCCAGGTGGCCTTAGCCCCTGATGGCACCCCAATTGCTACGGGGACGCATGTCTGCGATATATGTGGCAAGATGTTCCAGTTTCGGTATCAGCTTATTGTCCATCGTCGCTATCATAGCGAACGGAAACCGTTTATGTGTCAGGTTTGCGGTCAGGGTTTTACCACATCGCAGGATCTGACACGACATGGTAAAATCCATATTGGCGGACCGATGTTCACCTGCATCGTTTGCTTCAATGTCTTCGCTAATAACACCAGCCTGGAGCGGCATATGAAGCGTCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCATCTGGACAATCATTTTCGTTCGCACACGGGCGAAACGCCCTTCCGTTGCCAGTACTGCGCAAAGACGTTTACGCGCAAGGAGCATATGGTTAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACGCCGCATCAGTGCGATGTCTGTGGCAAGAAATACACACGCAAGGAGCATCTAGCTAATCATATGCGCTCCCATACGAACGAGACACCGTTTCGCTGTGAAATTTGCGGCAAGAGCTTTAGCCGCAAGGAACACTTTACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGTTGCGATTTCTGCTCCAAGACGTTTACGCGCAAGGAACATCTGTTAAATCACGTGCGTCAGCACACGGGTGAATCGCCCCATCGCTGCTCCTACTGCATGAAGACCTTTACACGCAAGGAGCATCTGGTCAATCACATTCGTCAGCACACGGGTGAGACACCGTTCAAGTGCACCTACTGCACAAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACCTATTGCACCAAGACGTTCACACGCAAGGAGCATCTGACGAATCATGTGCGCCAGCATACTGGCGACTCGCCGCATCGTTGCTCCTACTGCAAGAAGACATTCACACGCAAGGAGCATTTGACAAATCATGTGCGTTTGCATACGGGAGATTCGCCGCACAAGTGCGAATATTGCCAGAAGACATTCACACGAAAGGAGCATCTCAATAATCATATGCGTCAACACTCTAGCGATAATCCGCATTGTTGCAATGTCTGCAATAAGCCATTTACTCGCAAGGAGCATCTGATCAATCATATGTCACGTTGCCATACAGGCGATCGTCCTTTCACATGCGAAACATGCGGCAAATCGTTTCCACTCAAGGGCAATCTATTGTTCCATCAGCGTAGCCATACCAAGGGCCAGGAAATGGAACGTCCGTTCTCATGCGAAAAGTGTCCCAAAAACTTTATATGCAAAGGTCACTTGGTCTCGCATATGCGATCCCATTCGGGCGAGAAACCCCACGCGTGCACACTGTGCAGCAAGGCGTTCGTTGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAACCATCCGGATGCCATGATGCCGCCACCACCAGTGCATCCGCATCCGCAAATACCAGCCGGTGTGCTGACACAAGTCAAACAGGAAGTGAAACCGATTATAATTCCCCACCATTCGGCGACAACGATGCACACCATACAACAGATAACATCGGGAGGAGCAGCCGGAGCCGGTGGAGCCCAACTGACGCCGGGTCTGGTGCCGCTGGTGACATCAACTCTGATTTCTCATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCAACATTTGCCGGCCAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSVPSVIAPVVTTGGTTITLGGGPPPPSSSLAKSEIKEDGKPPHGMELYKVNIEDISQLFTYHEVFGKIHGDVVNHQLVAAAHGGQLPPPPPVGGGGIPGVVTTTTSSSTGSSGGAGGAAGGGTTSSTTGELLMPKMEGGLHGNVDAGGGGQTQVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTMHTIQQITSGGAAGAGGAQLTPGLVPLVTSTLISHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00618564;
80% Identity: -