Dema010199.1
Basic Information
- Insect
- Drosophila emarginata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037075365.1
- Location
- JBAMCD010000221.1:2068576-2081505[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-13 1.6e-09 37.7 0.1 1 45 352 397 352 397 0.93 2 2 1.2e-18 2.3e-15 56.4 0.0 1 43 805 848 805 850 0.95
Sequence Information
- Coding Sequence
- ATGAGCAGTTGCCGCTTTAGAAGTCGTCGTAGTCGTCGTcgccatcGCTTAGAACGCGTTGCTGAAGAATTGTTGGGTCGCAGGAAATGGAAACATTATCAGGAACAGCAGACGCGCACCCAATTGAATATCGCAGAACAACAGCCCATAGCAATAGGCCCAGAGGACGAGcaatacaacagcaacaacaacagcaacagcagcaacagcagcaacggcaacgacaaCCACTGTAAGCCACAGAACCACCGTCTAGATAAGCCCAACGTTTCacaatatttcaacaaaacgCTGCAATTGCAATCAGAAGATTTTGACAACAACCACACATCACAAGATTCGAGTGCAACATCACCATCACGTACACGTACACCATCACCACCGTCAGAGCCCAACGATTGGATACCGTCTGAGAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAATGCCATAGGTGAATTAGTGGCCGAAACGGCGCCCACGTTATCCATTGGCCACATTCAACAGAACGGCAATATTCTGCATGAGCACGACAGTGACAGCGATTCAAGCGCATCACTGCACAttagcagcaatagcaacaacaacaaaaagaaaacaaataataacaacaaatctGGAGCACGCAACATTACCGCCATTGAAACAttagcaacatcaacagcagcagcaacaacaacaacagctccAAGAACTGCAACAAATTCTCAAGAACTTTATAAGCTGCTCACCCAACAGGCAGCCAAAATGACATCAATGGACTCAATGGCCGCCCATTTGGCACTGTTAGCCGATTTCAATTTGATCAATTCGCTGGCAGTTAATCAACAACAGCACGCTAACTCGGTAACGCCAACTACCTCAGAAGATATTTCTGCCGCTGCAATTAGTCCCGCACTCAAAGATACATCCAGTCCCAACGCAGATGCTCCATTGGATCTTAGCAGTAAACCATCGCCGAACTCATCAATTAGCGGCGATATAAAGTCAAACAGAGCCCTCTCCGATTGTGCAACGCCCATATCATCAGCCAGACGCACCTACAGTGAAGAGGATCTGAATCGAGCTCTGCAAGATGTATTGGCCAATAAATTGGGAACACGTAAGGCGGCAAGTCAATACCATGTGCCGCGTTCAACGCTACGGAATAAGATCTATAAGATTGCATTGGAGGCAAAGCGTTTGAATGCACCGGAATTGCAACAGCTGCAACAAGAATTAGAATTGGATGAACAGGATGATTcggctgatgatgatggtgataaTGAGGGTGAACGGGATAGCAATGCATCGACACCGGCACCACATTATCACGATCTTGCCCAACGGATTGCGGCAACAGCCCAATTGAGTAAACTTAGTGTCATGTCCGAGCACAATGGCAGCGATATGGGTGATGATATGGAATCTGGTAATATATCACCAAAATTGCATAGAGTACAGGGTGGAAGCAGTTCTTCAGCTTCTGCATCGGCTGTTGCATCTGGTAGTGGTCTACCCATGACCATAGATCCGAATGTCCTGCTACAGACACTTATGCTAGCGGCTGGAATTGGGGTTATGCCCAAATTGGATGAGACGCAGACTTTGGGGGATCTGATTAAAACAATTGTTGTGGCCAATAATGGTAACATTATGAATGAGACTCATGGTGTTGCGAATGCAACATTGCacttgcagcagcaacagcaccaacagcagcagcaacaacaacagcagcaacatataAATGCAACAGCCGTTTTTCGGCATCGTCTACCAAAGTCTGAAACGCCCGAGACTAGCTCATCTTTGGACACAAATGAGACTGTCGATGATTCCATATTGAAGATTCCGTCCTTTAAGATCAGCGGCCCGGCCAGTATCTCGCCAAGCATtcccagcagcaacaacaataataataataattccaacTGTAGCTCCAATCGCAATGGCAGTGGCTCACCCATGTTGGCAGCTGCAATGGCTAATAGCAATTACACCGGCAACACTTTACTCTCACCATCGCCCACATCCATACAGAAGATGATGGCCAGCAATATACAAAGGCAAATTAATGAGACCACACATGAAGTGGCAATAAGTTTACGCAATGGCAACACAGGTCACAGcgattgcagcagcagcagcaataatatTGTCAGCGGCAACATAACCTCGAGCGGCAGCAATTATAAAAAGCCAAGCATATCGGTGGCTAAAATTATTGGCGGTACAGACACCTCACACTTTGGTGCCTCACCCAATCTATTGGCCCAGCATACGCATCATTCCCATATGCCTGCACATCATGCCGCTGCCCATgcccatcagcaacagcagcaacaactcaGTGCCCAGGAAGCAGCCGCATTGGCGGCTGGTAAGGGAACACGGCCCAAACGTGGCAAATATCGTAACTATGATCGGGATAGTCTAGTGGAGGCAGTCAAGGCAGTGCAACGGGGTGAAATGTCTGTCCATCGAGCGGGTAGCTATTATGGTGTACCGCACTCCACATTAGAGTACAAAGTAAAAGAGCGGCATTTGATGAGGCCGCGTAAACGGGAACCGAAACCTCAACCGGATTTGGATGGTTTGACCGGAAGAGCTGGTGCCAGTAAACTGAGCGCCCTTAGTCATCTAGAGAAACTAAAGGCCGGCAGTAATAGTTCCAGTCAAGCCAATTCCAAATTAAGCAATGCcctcaaaaataataatcaggcagcggcagcagcagcagctgttgctgccgcGGCAGCAGCACCAAATGGACTCAAGTTACCCTTGTTTGATGCCAACCCGCAATTGTCCTTTCAGCCAAATATGTTCTGGAATACACAGAATGCAGCCTATAGCCTAGATTTTAATCGAATGGCCAGTGCAGCTGCTTCATCAGCTGCAAATGTAAATCATCATGGCCATGGTGGAGTGCCGCCCATGAAAAGCGCTTTGGAAATTGCCGAAAATATGTACGATGGCATTATACGACAGACACTGCAAAATGATGCCAAGAATCAAGGTAATGGTCATGGACACGGTAATGCCCTGCTCGATCAATTGCTGGTAAAGAAGACACCCCTGCCGTTTACCAATAATCGTAGCAATGATTATGCCTCAATTTGCCCGCCAGTCAGTACCGAGACAATTAAACGATCGGCCAGCCCCTTGGGTCCATATGCGGATATTAAGAGAGAGCGTCTTAGCGGTGATAGTGGTAGCAGCAGTGATGAGGATTTAAATGATCATTCCAGCAGTcatcacaataataataataataacaataacaatagtGATCTGGCtcacaataaaaacaaaagcaacaacaatggcacCAACAATGGCAACGGACGCAGCCGTATGACCTCAAGGGATTCGGAAACGGATGTGAGTAGTATAAAGAGCGAACAATCGCATAGTTCGGCCCAAAAGCATAgccacaataacaacaaaatgatgGATCTCAATGGTGGTCACATTAAATGCGAATCACCCCCAAGTCCCAGTCCCAGTCAAATAGCAGGCGCCAATAGTAGCAGCACAAgtacaagcagcagcagcggatCCATATTACATGAGAAACTTGCCCAAATAAAGGccgagcagcagcagcagcaacagcaacaacaactgcaacaacagaCAGAAGAGCAATTATAG
- Protein Sequence
- MSSCRFRSRRSRRRHRLERVAEELLGRRKWKHYQEQQTRTQLNIAEQQPIAIGPEDEQYNSNNNSNSSNSSNGNDNHCKPQNHRLDKPNVSQYFNKTLQLQSEDFDNNHTSQDSSATSPSRTRTPSPPSEPNDWIPSEKCNFCVNGRLLTVNAIGELVAETAPTLSIGHIQQNGNILHEHDSDSDSSASLHISSNSNNNKKKTNNNNKSGARNITAIETLATSTAAATTTTAPRTATNSQELYKLLTQQAAKMTSMDSMAAHLALLADFNLINSLAVNQQQHANSVTPTTSEDISAAAISPALKDTSSPNADAPLDLSSKPSPNSSISGDIKSNRALSDCATPISSARRTYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKIYKIALEAKRLNAPELQQLQQELELDEQDDSADDDGDNEGERDSNASTPAPHYHDLAQRIAATAQLSKLSVMSEHNGSDMGDDMESGNISPKLHRVQGGSSSSASASAVASGSGLPMTIDPNVLLQTLMLAAGIGVMPKLDETQTLGDLIKTIVVANNGNIMNETHGVANATLHLQQQQHQQQQQQQQQQHINATAVFRHRLPKSETPETSSSLDTNETVDDSILKIPSFKISGPASISPSIPSSNNNNNNNSNCSSNRNGSGSPMLAAAMANSNYTGNTLLSPSPTSIQKMMASNIQRQINETTHEVAISLRNGNTGHSDCSSSSNNIVSGNITSSGSNYKKPSISVAKIIGGTDTSHFGASPNLLAQHTHHSHMPAHHAAAHAHQQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLDGLTGRAGASKLSALSHLEKLKAGSNSSSQANSKLSNALKNNNQAAAAAAAVAAAAAAPNGLKLPLFDANPQLSFQPNMFWNTQNAAYSLDFNRMASAAASSAANVNHHGHGGVPPMKSALEIAENMYDGIIRQTLQNDAKNQGNGHGHGNALLDQLLVKKTPLPFTNNRSNDYASICPPVSTETIKRSASPLGPYADIKRERLSGDSGSSSDEDLNDHSSSHHNNNNNNNNNSDLAHNKNKSNNNGTNNGNGRSRMTSRDSETDVSSIKSEQSHSSAQKHSHNNNKMMDLNGGHIKCESPPSPSPSQIAGANSSSTSTSSSSGSILHEKLAQIKAEQQQQQQQQQLQQQTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00577700; iTF_00483607; iTF_00555766;
- 90% Identity
- -
- 80% Identity
- -