Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_018151275.1
Location
JAECWY010000903.1:659369-671103[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-13 1.8e-09 37.3 0.1 1 45 339 384 339 384 0.93
2 2 8.8e-19 2e-15 56.4 0.0 1 43 791 834 791 836 0.95

Sequence Information

Coding Sequence
ATGTATATTTGCCTTACATTTCAATTAAGCTTAGAACGCGTTGCTGAAGAATTGTTGGGTTGCAGGAAATGGAAACATTATCAGGAACACCAGACGCGCACCCAATTGAATATCGCAGAACAACAGCCCATAGCAATAGGCCCAGAGGACGAGCAATACAACAGCAACAACAGCAGCAACGGCAACGACAACCACTGTAAATCACAGAACCACCGTCTAGATAAGCCCAACGTTCCACAATATTTCGAAGAAGATTTTGAGAACAACCAAACATCACAAGATTCGAGTGCAACAACACCATCACGTACACGTACACCATCACCACCGCTAGAGCCCAACGATTGGATACCGTCTGAGAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAATGCCATAGGTGAATTAGTGGCCGAAACATCGCCCACGTTGTCCATTGGCCACACTCAACAGAACGGCAATATAGTGCATGAGCACGACAGTGACAGCGATTCAAGCGCTTCACTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTCAAGAACTTTATAAGCTTCTCACCCAACAGGCAGCCAAAATGACATCAATGGACTCAATGGCCGCCCATTTGAAACTGTTAGCCGATTTCAATTATATCAATTCGCTGGCAGCAAATCAACAACAGCACGCTAATTCGGTAACGCCAACTACCTCAGAAGATATTTCAGCCGCTGCAATAAGTCCCACACTCAAAGATACATCCAGTCCCAGTGCAGATGCTCCATTGGATCTTAGTAGTAAACCATCGCCGAACTCATCAATTAGTGGCGATATAAAGTCAACCAGAGCCCTCTCCGATTGTGCAACGCCCATATCATCAGCCAGGCGGACTTACAGTGAAGAGGATCTGAATCGAGCTCTGCAAGATGTACTGGCCAATAAATTGGGAACACGTAAGGCGGCAAGTCAATACCATGTGCCGCGTTCAACGCTGCGGAATAAGCTCTATAAGATTGCATTGGAGGCAAAGCGTTTGAATGCACCGGAATTGCAACAGCTGCAACATGAATTAGAATTGGACGAACAGGAGGATTCGGGAGACGATGATGGTGAGGGTGAACGGGATAGTAATGCATCAACACCGGCATTACATTATCAAGAGCTTGCCCAACGTATTGCGGCCACAGCCCAAATGAGCAATCTTAGCGTCATGTCCGAGCACAATGGCAGCGATATGGGTGATGATATGGAATCTGGTAATATATCACCAAAATTACACAGGGTACAGGGTGGTAGCAGTTCATCAGCATCGGCATCGGCTGCTACATCTGCTGGTGGTCTGCCAATGACCATCGATCCGAATGTCCTGCTACAGACACTTATGGTGGCTGCTGGATTTGGGGTTATGCCCAAATTGGATGAGACGCAGACTTTGGGGGATCTGCTCAAAACAATTGTGGTGGCCAATAATGGTAACATTATGAATGAGACACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATATTGAAAATTCCGTCCTTTAAGATCAGCGGCCCGGCCAGCAGTATATCACCAAGCATTCCCAGCAATAACAACAACAATAATTCCAACTGCAGCACCAATCGCAACGGCAGTGGCTCACCCATGCTAGCAGCTGCAATGGCCAACCCCAATTACACCAGCAACACTTTACTCTCACCATCGCCCACATCCATACAAAAGATGATGGCCAGCACAATACAAAGGCAAATTAATGAGCAGAATAACACAGAGGTGCCAATAAGTTTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTACAAGAAGCCAAGCATATCGGTGGCCAAAATAATTGGCGGCACAGACACCTCACATTTTGGTGCGTCACCCAATCTGCTGGCCCAGCATACGCATCATTCCCATCTGCCTGCACATCATGCAGCTGCCCATGCCCATCAGCAACAGCAGCAACAACTCAGTGCCCAGGAAGCAGCCGCTTTGGCGGCCGGCAAGGGAACCCGGCCCAAACGTGGCAAATATCGCAATTATGATCGCGATAGTCTAGTGGAGGCAGTCAAAGCAGTTCAACGGGGTGAAATGTCGGTGCATCGAGCGGGCAGCTATTACGGTGTTCCGCACTCCACATTAGAGTACAAAGTCAAAGAGCGGCATTTGATGAGACCGCGTAAACGGGAACCGAAACCGCAGCCGGATCTTGATGGTTTGACCGGAAGAGCTGGGGCCAGCAAATTGAGCGCTTTGAATCACCTGGACAAACTAAAGGCGGGCAGTAATAGCTCGAGCCAAGCCAATTCCAAATTAAGCAATGCCCTGAAGAATAATAATCAGGCAGCGGCAGCAGCAGCAGCTGTTGCTGCCGCGGCAGCAGTACCCAATGGCCTCAAATTGCCCCTGTTTGATGCCAACCCGCAATTGTCCTTTCAGCCAAATATCTTCTGGACCCAATCGAATGCAGCGGCCAACTATAGCCTAGATTTTAATCGTATGGCCAGTGCAGCTGCTTCAGCGGCTGCCAATGTCAATCATCATGGCCATGGCGGTGGGCCGCCCATGAAGAGCGCATTGGAGATTGCCGAGAATATGTACGATGGCATCATACGCCAGACCCTGCAAAATGATGCAAAGAATCAAGGCAATGGTCATGGACACGGCAATGCCCTGCTCGACCAGTTGCTGGTGAAGAAGACACCCCTGCCGTTTACCAATAATCGTAGCAATGACTATGCCTCCATTTGCCCGCCAGTCAGTACCGAGACAATCAAACGCTCGGCCAGCCCTTTGGGTCCATATGCCGATATCAAGCGAGAACGTCTCAGCGGTGATAGTGGAAGCAGCAGTGATGAGGATTTAAATGATCATTCCAGCAGCCATCACAATAACAATAATAACAATAGTGATCTGGCTCACAATAAAAACAAAAACAGCAGCAACAATGGCACCAACAACAATGGCAACGGACGCAGTCGCATGACCTCAAGGGACTCGGAAACGGATGTGAGTAGTCTAAAGAGCGAGCAATCGCATAGTTCGGCCCAAAAGCATAGCCACAACAACAACAAAATGATAGATCTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCGTTGGCCACACACTACTACAGCTTCTAA
Protein Sequence
MYICLTFQLSLERVAEELLGCRKWKHYQEHQTRTQLNIAEQQPIAIGPEDEQYNSNNSSNGNDNHCKSQNHRLDKPNVPQYFEEDFENNQTSQDSSATTPSRTRTPSPPLEPNDWIPSEKCNFCVNGRLLTVNAIGELVAETSPTLSIGHTQQNGNIVHEHDSDSDSSASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQELYKLLTQQAAKMTSMDSMAAHLKLLADFNYINSLAANQQQHANSVTPTTSEDISAAAISPTLKDTSSPSADAPLDLSSKPSPNSSISGDIKSTRALSDCATPISSARRTYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKLYKIALEAKRLNAPELQQLQHELELDEQEDSGDDDGEGERDSNASTPALHYQELAQRIAATAQMSNLSVMSEHNGSDMGDDMESGNISPKLHRVQGGSSSSASASAATSAGGLPMTIDPNVLLQTLMVAAGFGVMPKLDETQTLGDLLKTIVVANNGNIMNETHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKIPSFKISGPASSISPSIPSNNNNNNSNCSTNRNGSGSPMLAAAMANPNYTSNTLLSPSPTSIQKMMASTIQRQINEQNNTEVPISLRXXXXXXXXXXXXXXXXXXXXXXXXXNYKKPSISVAKIIGGTDTSHFGASPNLLAQHTHHSHLPAHHAAAHAHQQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLDGLTGRAGASKLSALNHLDKLKAGSNSSSQANSKLSNALKNNNQAAAAAAAVAAAAAVPNGLKLPLFDANPQLSFQPNIFWTQSNAAANYSLDFNRMASAAASAAANVNHHGHGGGPPMKSALEIAENMYDGIIRQTLQNDAKNQGNGHGHGNALLDQLLVKKTPLPFTNNRSNDYASICPPVSTETIKRSASPLGPYADIKRERLSGDSGSSSDEDLNDHSSSHHNNNNNNSDLAHNKNKNSSNNGTNNNGNGRSRMTSRDSETDVSSLKSEQSHSSAQKHSHNNNKMIDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLATHYYSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00500964;
90% Identity
-
80% Identity
-