Dneo015833.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000002.1:8919921-8940324[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-13 2.1e-09 37.0 0.1 1 45 263 308 263 308 0.91 2 2 8.2e-19 1.7e-15 56.5 0.0 1 43 715 758 715 760 0.95
Sequence Information
- Coding Sequence
- ATGTGTACATGTCCAGTTGAACAATGCCTTGACCATACACAACTTCTCATGATAGTTGGTAGTAAGTGGTTGAGGGGGATTCTAACTTTAGTTTGCTTAGAACGCGTTGCTGAAGAATTGTTGGGTCGCAGGAAATGGAAACATTATCAGGAACAGCAGACGTGCACCCAATTGAATATCGCAGAACAACAGCCCATAGCAATAGGCCCAGAGGACGAGCAATACAACAGCAACAACAGCAGCAACAGCAGCAACGGCAACGACAACCACTGTAAGCCACAGAACCACCGTCTAGATAAGCCCAACGTTCCACAATATTTCAACAAAACGCTGCAGTTGCAAGCAGAAGATTTTGAGAACAACCACACATCACAAGATTCGAGTGCAACATCACCATCACGTACACGTACACCATCACCACCGCCAGAGCCCAACGATTGGATACCGTCTGAGAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTAAACGCCATAGGTGAATTAGTGGCCGAAACGGCGCCCACATTGTCCATTGGCCACATTCAACAGAACGGCAATATACTGCATGAGCACGCTAACTCGGTAACGCCAACTACCTCAGAAGATATTTCTGCCGTTGCAATAAGTCCCACACTAAAAGATACACCCAGTCCCAGTGCAGATGCTCCATTGGATCTTAGCAGTAAACCATCTCCAAATTCATCAATTAGTGGCGATATAAAGTCAACTAGAGCTCTTTCCGATTGTGCAACGCCTATATCATCAGCCAGACGCACATATAGTGAAGAGGATCTAAATCGAGCTTTACAGGATGTATTGGCCAATAAATTGGGTACACGTAAGGCGGCAAGTCAATATCATGTGCCGCGTTCAACGTTGCGTAATAAGATCTATAAAATTGCATTGGGGGCAAAGCGTTTGAATGCACCAGAATTGCAACAGTTGCAGCATGAATTAGAATTGGATGAACAGGATGATTCGGCAGATGATGATGCTGATAATGAGGGTGAACGGGATAGTAATGCTTCAACACCGGCACCACATTATCAAGAGCTTGCCCAAAGGATTGCGGCGACAGCCCAATTAAGCAAATTGAGTGTCATGTCCGATCACAATGGCAGTGATATGGGTGATGATATGGAATCTGGTAATATATCACCAAAATTGCATAGAGTACAGGGTGGTAGCAGTTCGTCAGCTTCTGTATCTGGAGCTGGAGCATCTGCTGGTGGTCTACCTATGACCATTGATCCAAATGTTTTGCTACAGACACTTATGTTAGCTGCTGGAATTGGAGTTATGCCCAAATTGGATGAGACGCAGACTTTGGGGGATCTAATTAAAACAATTGTGGTGGCCAATAATGGTAACATTATGAATGAGACTCATGGCGCTGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTTTCGGCATCGTCTACCAAAGTCTGAAACGCCCGAAACTAACTCATCGTTGGACACTAATGAGACTGTTGAGGATTCCATATTGAAGATTCCGTCCTTTAAGATCAGCGGCCCGGCCAGTATCTCGCCAAGCATTCCCAGCAGCAACAACAACAATAATAATTCCAACTGTAGCACCAATCGCAATGGCAGTGGCTCACCCATGCTGGCAGCTGCAATGGCCAACAGTAATTACACCGGCAACACTTTACTCTCACCATCGCCCACATCCATACAAAAGATGATGGCCAGCAATATACAAAGGCAAATCAATGAGCAGACCACACAAGAAGTGGCAATAAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGCGGCACAGACACCTCACACTTTGGTGCCTCACCCAATCTGCTGGCCCAGCATACGCATCATTCCCATCTGCCTGCTCATCATGCTGCTGCTCATGCCCATCAGCAACAGCAGCAACTTAGCGCCCAAGAAGCAGCCGCTTTAGCGGCTGGCAAAGGAACACGACCCAAACGTGGCAAATATCGCAACTATGATCGCGATAGTCTAGTGGAGGCAGTAAAGGCAGTGCAACGGGGTGAAATGTCCGTGCATCGAGCTGGTAGCTATTACGGTGTGCCGCATTCCACATTAGAGTACAAAGTGAAAGAGCGGCATTTGATGAGACCGCGTAAACGGGAACCAAAACCGCAACCGGATCTAGATGGTTTGACCGGAAGAGCTGGTGCCAGCAAATTGAGCGCCCTTCATTTGGAAAAACTAAAGTCTGGCTCCAATAGCTCCAGTCAAGCCAATTCCAAGTTAAGCAATGCCCTCAAGAATAATAGTCAGGCAGCGGCAGCAGCAGCAGCAGCAGCAGCCAATGGCCTCAAGTTGCCCATGTTTGATGCCAACCCGCAATTGTCCTTTCAGCCAAATATGTTCTGGACCCAACCGAATGCAGCTACCAACTATAGCCTGGATTTTAATCGTATGGCTAATGCAGCTGCTTCGGCAGCTGCCAATGTCAATCATCATGGCCATGGTGGTGTGCCGCCCATGAAGACCGCTTTAGAGATTGCCGAGAATATGTACGATGGCATCATACGCCAGACCCTGCAGAATGATGCCAAGAATCAAGGTAATGGTCATGGACACGGCAATGCCCTGCTTGACCAATTGCTGGTGAAAAAGACACCCCTGCCGTTTACCAATAATCGTAGCAATGACTATGCCTCCATTTGCCCGCCAGTCAGTACCGAGACAATCAAACGCTCGGCCAGCCCTCTGGGTCCATATGCGGATATTAAGCGAGAGCGTCTTAGTGGTGATAGTGGTAGTAGCAGTGATGAGGATTTAAATGATCATTCCAGCAGTCATCACAATAATAATAATAACAATAGTGATCTGGCTCACAATAAAAACAAAAGCAACAACAACAATGGCACCAATAACAATGGAAACGGACGTAGCCGCATGACCTCAAGGGACTCGGAAACTGATGTGAGTAGTCTAAAGAGCGAGCAATCGCACTGTTCGGCCCAAAAGCATAGCCACAATAACAACAAAATGATGGATCTCAATGGCCAATGCCACAGCGGTAGTCACATTAAATGCGAATCACCGCCCAGTCCAAGTCCCAGTCATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCCACATGGCCACTGTTGGCCACACACTACTACAGCTTCTAA
- Protein Sequence
- MCTCPVEQCLDHTQLLMIVGSKWLRGILTLVCLERVAEELLGRRKWKHYQEQQTCTQLNIAEQQPIAIGPEDEQYNSNNSSNSSNGNDNHCKPQNHRLDKPNVPQYFNKTLQLQAEDFENNHTSQDSSATSPSRTRTPSPPPEPNDWIPSEKCNFCVNGRLLTVNAIGELVAETAPTLSIGHIQQNGNILHEHANSVTPTTSEDISAVAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKSTRALSDCATPISSARRTYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKIYKIALGAKRLNAPELQQLQHELELDEQDDSADDDADNEGERDSNASTPAPHYQELAQRIAATAQLSKLSVMSDHNGSDMGDDMESGNISPKLHRVQGGSSSSASVSGAGASAGGLPMTIDPNVLLQTLMLAAGIGVMPKLDETQTLGDLIKTIVVANNGNIMNETHGAANXXXXXXXXXXXXXXXXXXXXXXXXVFRHRLPKSETPETNSSLDTNETVEDSILKIPSFKISGPASISPSIPSSNNNNNNSNCSTNRNGSGSPMLAAAMANSNYTGNTLLSPSPTSIQKMMASNIQRQINEQTTQEVAISLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGTDTSHFGASPNLLAQHTHHSHLPAHHAAAHAHQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLDGLTGRAGASKLSALHLEKLKSGSNSSSQANSKLSNALKNNSQAAAAAAAAAANGLKLPMFDANPQLSFQPNMFWTQPNAATNYSLDFNRMANAAASAAANVNHHGHGGVPPMKTALEIAENMYDGIIRQTLQNDAKNQGNGHGHGNALLDQLLVKKTPLPFTNNRSNDYASICPPVSTETIKRSASPLGPYADIKRERLSGDSGSSSDEDLNDHSSSHHNNNNNNSDLAHNKNKSNNNNGTNNNGNGRSRMTSRDSETDVSSLKSEQSHCSAQKHSHNNNKMMDLNGQCHSGSHIKCESPPSPSPSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFATWPLLATHYYSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00500964;
- 90% Identity
- -
- 80% Identity
- -