Ddiv008889.1
Basic Information
- Insect
- Drosophila dives
- Gene Symbol
- -
- Assembly
- GCA_035042365.1
- Location
- JAWNLJ010000383.1:5649311-5653343[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.3e-05 0.0065 16.8 0.1 1 23 149 172 149 172 0.96 2 15 0.0014 0.1 13.1 2.9 2 23 221 243 217 243 0.89 3 15 0.014 0.97 10.0 0.7 1 23 350 373 350 373 0.92 4 15 0.035 2.4 8.7 3.7 2 23 422 443 421 444 0.95 5 15 0.0032 0.23 12.0 0.5 1 23 508 531 508 531 0.88 6 15 2 1.4e+02 3.2 0.1 2 14 550 562 549 574 0.85 7 15 0.00069 0.049 14.1 3.3 2 23 582 604 582 604 0.96 8 15 0.00079 0.055 13.9 0.1 1 23 707 730 707 730 0.95 9 15 1.3e-05 0.00089 19.6 0.4 1 23 779 802 779 802 0.95 10 15 0.0012 0.082 13.4 2.2 2 23 852 874 851 874 0.97 11 15 0.0043 0.3 11.6 2.1 1 23 961 984 961 984 0.91 12 15 0.12 8.8 7.0 2.2 1 21 1036 1056 1036 1057 0.95 13 15 0.013 0.95 10.0 0.5 2 23 1095 1119 1094 1119 0.95 14 15 0.77 55 4.5 2.5 1 23 1137 1161 1137 1161 0.88 15 15 7.4 5.2e+02 1.4 0.3 14 23 1194 1204 1192 1204 0.87
Sequence Information
- Coding Sequence
- ATGGAAGGTATGGACCTGTGGACGTCCATGTTTTCGGCAGACTTTGAAGAGGCTGATGCTGGGCCAAAGAATCAGAGTTATGCAGACGAGTTTATGGGCGATGAGGATGCGGATGAACTGGAGACTGCTGATGATAATGTTCAGGCAAGGAAAGGACCTGAGCCAGATGACGATGccatatttgattttgaactGGAGCCAATTGCTAACATTGCGGAACCAGAAACAGCGTCCAGAGCAACTGTACGATTGGCGCCACCAATGCCGATTGCGGCGCCCGTTCGGCCCCAGCAGCATCATCACCCGTCAACGGTTAGCTCCACCTCTTCCTCCCTGATGGTAGGTCGCGGTGGTACTGCCGCGCCACCTACACGACCTACAACATCGCAAATCAATGCCACAGATGAGAACGGAGTACCCATTAACTATGAGCTGGGTGTCATCTATATATGCCCTGCTTGTGGGGCCGAGTTCCGGCAACAGGATATGTGGAAGCGGCACATGAACCAGACGCATCAGTATAACACTCGCCGTGGTCTCAATTTTGTTGGAATTGATAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGGATTGCCATGCACAGTCGGGAAAATCTGCTCAAGCACAAGTTCACCCATTTGCCATATCGTTGCACCAAGTGCTACATCTGCAAGCGCGAGTACAAGTACAGACAGGACCTGATGGTGCATCTGCGCATGGTACACTGTGACGAGGTGGTTGCCATGATGCGTGCAGGTGATGCCAGTGCTGGACGCAAGACCAGAGTCCGTGAGCCGCGCGTCGAGCAGCGTGCGTCTCGTATCGGGACGATTGGCCGAGGATCGCTtcgtgatgatgatgatagtATCGAGGTCAAGAATGAGTTGATGGACACGGAAGCAACGGCTGACGACGACGTGGATGACGATCAGAATCGCAGCTTCAACCATGGAAACAAGAAGCGTGTTACTCAGCTGTCCGACAACGGCGGTGCCAGTGGCAGTGGCGGCAGCGCTTCGGATATGTGCGAAGATTACATACACTATATTTGTCCCGATTGTGGCACCGACTGTGACACGCACGCTCAGTGGAGCCAACACATTGAATTTGTGCACGACTATGTCAGCCGGCGCGGACTCAATTTTCGTTGCGTGGACATGCAGATGCAGTGCCTCGAATGCAAGGAGTTTGTCATCCCGAACACAATTAAAACACTGCGCGCACACAAATTCAGTCATTTGGCTCAGCCGGATTGGATGCGTTGCAAGCTATGCTACCGAGGCTATACGGATCATAATGAACTGGTCACGCATCTGCTCAAGCATCATCATCTGAACACATTAATGCCCgaagaggagcaggagcagcaaacGGTTAGTGCTAGTGTCGGCGATGATGCTGAGGATAACTCTGGCATTGGCAATGGCTGCGATGATGAATCCCTGTTGCAATTTGAGGATGTGCGCCGTCGTGGCGGTCGCATTGCCGGCGATGATATGTTTGAGCCGCATATTGATTATCTGTGCCCGCAGTGCGGCCGCGAATTCATTGAGAAGAAGCACTGGCGCACGCATGTCGTCCAAGTGCATGGTATGAACAATCTGGCCAAGCTAAACTTTGAGGTCATCAATGACCGGCAGCTGAAGTGCACAGAATGCGACAAGATCATCACGAATGCCTATGGCATTCAGAATGCCCAACAACATCGGATTACTCATTTGCCCTACAAGGCATATGCACGCTGCCgcaaatgccacaaatcgTATACGGATCGCAAGGGTCTGGTTAAGCATTTGGCCACATACCATTGCGTCGGCTATGAGCCGCGCAATTCAGGTGCTGGTGGAACAGGAGCCGGTGCCGGACAGAGCCAGGTCAAGTCGCAAACGCCGCGCAAACAAATTGTGACTATTGCCAATGAAACGTATGAGATTATCTATTTGGATGACGACCTCTCACCgccaaataacaataatgttaATGAGGAGAATGATTTTGGCGAGCAGATGCAAGCGGATGAAGATGACTATGCCACAGGCTGCACCAGCACACGGCAGTTGCCACCAGCTGCCGCGGCTGCCATTACCTCTGCATCCAATCAAAATGCGAATCGTTATAAATGTGTTGATTGCGGCTCCTTGTTTGCCACGCAGGCGGCGCTCAAGACGCACATTAGCGAGGAGCATGATTTTACGGACACACAGTATAGTGCTAAAAAGTTTGATAATGCCGAACACGCAGACGAGACAGCGCCAGGAGCATCGTCTGTGGCAGCCACTTCACTACCCAAAATCTTTTCTGGCGGCTCCACAATCGAacagaattatatatatctgtgccCCTCCTGCGGCAAGCCATACAAGACACAATACGAGTGGCGTCGCCACATCAACAAGGAGCACAACTTTGATAAGCGgcagtatttaaatatgcgaCAGCTGGACAAGTATCGCTATCAGTGCACACAGTGCAAGGACATTGTGAGTAATTCAAAGCTAAAGGGACTGCAGGATCATCACTTTAGACACTTGCCTTATAGGCTCTACTTAAAGTGCCTCGTTTGTGGCACCTGCTACAATCACAAGCCCAACATTGCCGCCCATCTGCGGACGCGGCACAACATCTTTGAGCGTGACACGCCCTGGCGTGAAATGCAGCCAAAGCCACAGAATGGATATGATGCCATCAAATACAAAGATAAGGATATGCCAGTTATGTCCGCGTCTACGTCAGACTCATCCACgcctggcagcagcagcaacagtggtCGCTCACTGAAACCGCATCCTGGTTACCTGCCCATGCGACCCGCTGGCCTAAACACACTGGAGGATAGCATCTCCTATCACAATGCTGTCGATCTGGACTTTATCACCTACTTCTGCCCCAAGTGCAACAAGAACTTTGATTCGCACGCCTTCTGGCGCAAACACATTGTGGAGCAACACAACTTTAACAGCCGGCAGGGCTTGAACTTTCGCCAGATCGACAATCATCACTACCTGTGCCTGGAGTGCTACAAGCGGGTGACAGTCACCCACACCAAGGGCGCCATTGGGCAGCTGCAATCACACAAGTTCCGACATCTTCCATATCGCTCGTTTAAGTGTTTGACCTGCAGCGGAAAATTTGTGCgaaagcaaatgtttttcaagCATTTAAATCGTGACACGAATCGCTGCGACAACGGAGACCATAATAACGAGGAACACATCGCTGAGCAGCCGGAGAGATTTTCATCAGCAAACGATGCAGCTGAGGCCACCTCGTATCGCTTGATGTGTCCGCAGTGCGGCGATAACTTTAGCACCAGCACCAAATCCCTCTGGCGCAAGCATATTAACACTCAGCATGGTCTAAACAAGCTGGAAGTGCTGCACATGTGCAAGCTGGGCGACGATCTCTATCGCTGCACTGACTGCGATGAGCAGCTGGAAACGAAACATCTGCGAGAGCTGCAAAACCATCGCTTCCGTCACTTGCCCCATGCCGCCTACATACGTTGCCAGCTGTGCGAGCAAGAACAGCAGGATGAACAGGGTCATGGTCCCGTTGCAGCCGGCATGCACACCATGAGTGAGCTGCAGCAACATATGCGAGATGAGCATCCATCGTTTGTGGAAAACGATGAGCAAATGCAGTTGTTCAACGATGCTGATGATCAGTCGATTGCGGTGGCAAGCAACGAGGCTTCCGACAATGGGTCAGATATGCCAATGCCGCTTCAAATGTTCCTCGATggcgaggatgaggatgaggatgagaaCAGCCAAACGGAGGCAGCTAACAATGATACGTCCGATGATGGACCATATATGCCCCTGCCGCCGCATTTACTGGAGGAGGACGCAGACGACTTGGAGTTCGAAGATCAATATCTATTGAGCTAA
- Protein Sequence
- MEGMDLWTSMFSADFEEADAGPKNQSYADEFMGDEDADELETADDNVQARKGPEPDDDAIFDFELEPIANIAEPETASRATVRLAPPMPIAAPVRPQQHHHPSTVSSTSSSLMVGRGGTAAPPTRPTTSQINATDENGVPINYELGVIYICPACGAEFRQQDMWKRHMNQTHQYNTRRGLNFVGIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMRAGDASAGRKTRVREPRVEQRASRIGTIGRGSLRDDDDSIEVKNELMDTEATADDDVDDDQNRSFNHGNKKRVTQLSDNGGASGSGGSASDMCEDYIHYICPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKEFVIPNTIKTLRAHKFSHLAQPDWMRCKLCYRGYTDHNELVTHLLKHHHLNTLMPEEEQEQQTVSASVGDDAEDNSGIGNGCDDESLLQFEDVRRRGGRIAGDDMFEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNNLAKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHCVGYEPRNSGAGGTGAGAGQSQVKSQTPRKQIVTIANETYEIIYLDDDLSPPNNNNVNEENDFGEQMQADEDDYATGCTSTRQLPPAAAAAITSASNQNANRYKCVDCGSLFATQAALKTHISEEHDFTDTQYSAKKFDNAEHADETAPGASSVAATSLPKIFSGGSTIEQNYIYLCPSCGKPYKTQYEWRRHINKEHNFDKRQYLNMRQLDKYRYQCTQCKDIVSNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFERDTPWREMQPKPQNGYDAIKYKDKDMPVMSASTSDSSTPGSSSNSGRSLKPHPGYLPMRPAGLNTLEDSISYHNAVDLDFITYFCPKCNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGKFVRKQMFFKHLNRDTNRCDNGDHNNEEHIAEQPERFSSANDAAEATSYRLMCPQCGDNFSTSTKSLWRKHINTQHGLNKLEVLHMCKLGDDLYRCTDCDEQLETKHLRELQNHRFRHLPHAAYIRCQLCEQEQQDEQGHGPVAAGMHTMSELQQHMRDEHPSFVENDEQMQLFNDADDQSIAVASNEASDNGSDMPMPLQMFLDGEDEDEDENSQTEAANNDTSDDGPYMPLPPHLLEEDADDLEFEDQYLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517225;
- 90% Identity
- iTF_00543978;
- 80% Identity
- -