Basic Information

Gene Symbol
NCOR1
Assembly
GCA_035041375.1
Location
JAWNLE010001223.1:459167-465765[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-07 0.00017 21.7 0.0 3 43 880 920 879 922 0.97

Sequence Information

Coding Sequence
atggaacagcagcagtatgTCAAGAGTCTCGGACATCTGCAGactcatcagcaacatcagcagcagcagcagcagcaacagcagcagcaacagcagcaacaacacgagcaacaacaacggcaacagcagcagcagcaacaacaaatgcatcaccatcaccatcatccgcaacaacaacaacaacagcagcaacagcaacagcagcagcagcaacaacaacagcagcagcaacagcaatcgtCTCGCTCTGCAGCTAGTCCGTTGTCGCCGCCACGTCCTGCACCGGGCAgtgcagcggctgcagctgcagcgaatAACTATGCTAAATTCGCAGATGCGCCGCAGCATTTCATACAGCCAGCGTCATACAGCATCGGCATCGCACCGGTGGCCAACTATAGGGAGAATCATTATATGCGGATACCACCCCAGTTGCAGGCAACGGTGCCGGAATTTCAGCGGGCGGCGCGTGCTGCATCTGtggctgccgttgctgctgctgccggtggtgcggccgctgctgctgcagctgttgttgctggtggtcCACCGACaactgcggcggctgctgctgcggcagcggcTGTCCAGGTGCCACCCGGCAGTATGCCACCGCCGGGTGCCCAATCTGGCGGTGTTCTCGTCATGGATGCAATGTCCCATTATCAATCATTGCAGTATAACAACGAATACCTGACCAATgccgcagctgttgcagcagtcaatcagcgccagcagcaccagcaacaccagcagcaacagcagcaacagcagcagcagcagcagcagcagcagcaacaacaacagcaccaacagtCACTGTCGGAGCAGCCGGGCAGCGTGGGTCAGCCGTATAAGAAGCAGCGCTTGAGCGACGCCAATGCCAGTAACATGAATCACCTGccacaacaccagcaacagcagcagcagcgctctTCACccgctcagcagcagcaacaacaacataacagTCGACAGAGCAATCATGGCGCTGTGTTGCACATgtccgctgcagcagcagctgcctctgTTCTCACACCGCTGGCCATGCAGCAGCTCAAAGTGGAAAcgttgccacagcagcaacaacaacaacaccaccaacaacagcagcaacagcagcaacatcagcaacatcaccagcagcagcagcaacagcaccaccaacagcagcagcagcagcagcagcaacaccaccagcagcaacagcaacaacaccaccagcagctGACGTCACAGGCGCATGCACCACGTGGTCTGGTGGCACCGCCAACGATGTCAACCGCCACTGGCAGCATTGGTTGTGGTCCAGCGCAACATATTAGCTCGGTGAGCGTCTCCTCGGCGGCcatgaacagcagcaacatcagcggTAGCAGCAGTGTTGGCAGCGTTGCacatgctgcagcagcaatggcaagcACATCCGAAGCCTACCATCCGCAGGTGGAGGCCATTTCGCCAACGCTGCCCAGCGACAATGCGGATGAGCGtgggcgcagcagcagcagcagcagtagcagcaacaacaacaacaacaacaatgctagCAGCAATAAtactagcagcagcaacaacaacaacaacaagagcagcagcaacagtaacagtaacagcagcagtagcagcagcagcagcagcaacaacagcaacaataacaacagcgcCAAGGAGGAGCTGCTCATGCAAATCCAGCGTGTGGACAATGACATCAAGAGCGCCGAGACGGCAATGGATGCGCTGCGTAAAAAGGAGAAATCATTGATGGACGAGGCAGCAGCGACGGCGGCAAGTGctaaacagcaaaagcagcagcagcagcagcagccgctgtcAATGGCTgcgtcaacgtcaacggcagcggcagcagcagcagcagcgtcagcgtcgGCGCCGGCGACAACTGATGGCACTCAGATTATGGAGCTGGCTTGGCGCACACGAATGCTGGCGCAGAGCATCTATGAGGCGAACCGTAAAACGGCAGCCGAACAACATTCCCTGGTGAGTGCGGCGTTGGGcgtggccaacaacagcaacaacaacaacaacgacagtggcagtggcagtggcagcggcagtggcagtggcgaTGGTGATGGCGATGAGCTGGGAAGATCACGTCCCTGGCTGCCGTTGTACAATCAACCGTTGGATGTGGAGGCGCTGACGCATCTGATTAAGCGACACCAGACATTGGTGCGTAATCCACTGTTGCAGCACATACGCAAACTGAAAGCGGAACGCTGGGAACACAATCAGGGTCTAGTGGATAAATATACCAAGGATCAGGCCGATTGGCAGCGGCGCTGCGAACGGGCCGAGGCCAGTGCCAAGCGGAAGGCGCGTGAGGCCAAAAATCGGGAGTTCTTTGAGAAGGTGTTCACCGAGCTGCGGAAACAGCGCGAGGATAAGGAGCGTTTCAATCGTGTCGGTTCGCGCATCAAATCCGAAGCGGATCTCGAGGAGATCATGGATGGGCTGCAGGAGCAGGCGCTCGAGGATAAAAAGATGCGCTCATATGCCGTTATCCCGCCCCTAATGCACGATACCCGCCAGCGTCGCTGCGCCTATCACAATGAGAACGGTCGCATTTGGGATATGGTCGCGTTGCACGAAGAGCGCAAGGCGATCAATATGTGGACAGCCGGCGAGAAGGAGACGTTCAAGGAGAAGTATCTGCAGCATCCGAAGAATTTTGGTGCGATTGCCGCCAGTTTGGATCGCAAATCACCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGTTGCGCAAATCCCGCCAGCGGACACGCAGCAGTCGCCATCCGGCCAaggcgcaacaacagcagccccaATGCATCATCGACTCGCTGACGACGGGCGTGACGACGCGTCTGCAGCgcgaacagcaacagaagtCCGGCAATCGATCCAGTGCCGTTGCTGAGCGTGAGCGGGCTGAGCGTGTTGCCGAACGGGAGCGTGTCGCCGAGCGGGCAGCAGCGGATGCGGCCAAAGCGGCTGAGTGTGCGGCCGAGAAGGCCAGCGCTGTTAGCAAAGCGGCCGAAGCGGCTGCCGGCAGCGAGAAGGTGGCCAAAagtgcggcagcagcagcagcagtagcagcagcagcagcagcagcagcagcagcagcggcggcggcagcagcagcagctagcgACAAGGCGGGCAAGAATacaacagccgcagccgcagcagcagtggcgACAGAGATCTCAACGGGCAGCAGCGATGCCAAAGCGAAAACCTCTGAGGAGGatacggcagcagcagcagcagcagcagcaacagcagcaacagcagcaacaacagcaacaacaactgcaaaagcagctgccaaagcggcagcaaaagcaaaagcaggtggtgcagctgcagcagcagcagcagcagcaacaacaacctcagtcacagcagcagcagcagcaacaacaacctgtacaacagtggcaacaacagcggcaacaataacaacaacagcagcagcagcagcaacaacaacaacgacagcaacagcgacaacaacaacagcagcagcaacagcagcagcaacggcaatcAGCgaggctgcagctgcagcgacaCCGCCCAAGTCGTCCAAGtcgcaacagttgcaacagcccGATGGGAGCACAGTTCCGGACAAAGCAAAGCCGTCGAAGGCCGAGGCACCatcggaaacggaaacggagcAGCTGGGCAAGCAGAGCAAACCAAAGGCCTCCAATGCCGATAGCTATAACGCCACGGGTGCctcggcaacaacagcaccaacatcGGCAGCGGCAGGTGGCACGCTCACAGCAGTGCCCGCGGTTAGTGTGGCGATCAACGGCTTTAAGCCTGGCTACCAGAGCGTCGTTATGGCCAATGTCAAGGCATCAACGGCCGGAGGCATTGACGATGtcgcaacgacaacagcagcagcagcagcggcgtcgACAAATGCGACTGGCGATAAAATCGTTAAGACGACGCcgacaacagttgctgctgcggctggtTTTGCTGTGCCCAATGCGGCCAGTCAAGCGGAGCCAGTTAGCAGTGTGGCAACGCTGACAACGGCCACAACAGCTGGCAACTATCTGGGCCAAAAGTTGAAGGCGGCGCAGGTGGAAGGACTTGGCGCTGGCAACGAGCTGCACACGGATGTCAGTGATGCCAAGAAGAAACGCTTCGAGCTTGCGCCTGGCGATGTCAGCAGCAATGCTctcagcaataacaacaacaacaacaataacaacaacaatagcaatagcagcagcagcagcaatttgaaCGCCAACAGCTCCAAACTGAACATCAAGGATGCTCCCAATCAAGTCACATGCATTGGCAAAAGCAACACTGGATCTGGGCCAGCTTTGGTGCCGGCCGCCgcctcatcctcatcgctgCAGTTTATTGGCTCTGCATCGATTATGtccacaacagcaacgggtGCACGGGGCACAATGGCGACGACGGATCGTGCTGGTAATTTGTTGAGCACCTCCGAGGTTCTGGCATTGGATGGCAAAGGGGGCACAGTAGACCTGATTGGTCCCGCAGTGCATGAATCCTAA
Protein Sequence
MEQQQYVKSLGHLQTHQQHQQQQQQQQQQQQQQQHEQQQRQQQQQQQQMHHHHHHPQQQQQQQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPAPGSAAAAAAANNYAKFADAPQHFIQPASYSIGIAPVANYRENHYMRIPPQLQATVPEFQRAARAASVAAVAAAAGGAAAAAAAVVAGGPPTTAAAAAAAAAVQVPPGSMPPPGAQSGGVLVMDAMSHYQSLQYNNEYLTNAAAVAAVNQRQQHQQHQQQQQQQQQQQQQQQQQQQHQQSLSEQPGSVGQPYKKQRLSDANASNMNHLPQHQQQQQQRSSPAQQQQQQHNSRQSNHGAVLHMSAAAAAASVLTPLAMQQLKVETLPQQQQQQHHQQQQQQQQHQQHHQQQQQQHHQQQQQQQQQHHQQQQQQHHQQLTSQAHAPRGLVAPPTMSTATGSIGCGPAQHISSVSVSSAAMNSSNISGSSSVGSVAHAAAAMASTSEAYHPQVEAISPTLPSDNADERGRSSSSSSSSNNNNNNNASSNNTSSSNNNNNKSSSNSNSNSSSSSSSSSNNSNNNNSAKEELLMQIQRVDNDIKSAETAMDALRKKEKSLMDEAAATAASAKQQKQQQQQQPLSMAASTSTAAAAAAAASASAPATTDGTQIMELAWRTRMLAQSIYEANRKTAAEQHSLVSAALGVANNSNNNNNDSGSGSGSGSGSGDGDGDELGRSRPWLPLYNQPLDVEALTHLIKRHQTLVRNPLLQHIRKLKAERWEHNQGLVDKYTKDQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDTRQRRCAYHNENGRIWDMVALHEERKAINMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRHPAKAQQQQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERVAERERVAERAAADAAKAAECAAEKASAVSKAAEAAAGSEKVAKSAAAAAAVAAAAAAAAAAAAAAAAAASDKAGKNTTAAAAAAVATEISTGSSDAKAKTSEEDTAAAAAAAATAATAATTATTTAKAAAKAAAKAKAGGAAAAAAAAATTTSVTAAAAATTTCTTVATTAATITTTAAAAATTTTTATATTTTAAATAAATAISEAAAAATPPKSSKSQQLQQPDGSTVPDKAKPSKAEAPSETETEQLGKQSKPKASNADSYNATGASATTAPTSAAAGGTLTAVPAVSVAINGFKPGYQSVVMANVKASTAGGIDDVATTTAAAAAASTNATGDKIVKTTPTTVAAAAGFAVPNAASQAEPVSSVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHTDVSDAKKKRFELAPGDVSSNALSNNNNNNNNNNNSNSSSSSNLNANSSKLNIKDAPNQVTCIGKSNTGSGPALVPAAASSSSLQFIGSASIMSTTATGARGTMATTDRAGNLLSTSEVLALDGKGGTVDLIGPAVHES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2