Basic Information

Gene Symbol
NCOR1
Assembly
GCA_035042225.1
Location
JAWNLQ010000485.1:1071183-1077674[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-07 0.00017 21.7 0.0 3 43 885 925 884 927 0.97

Sequence Information

Coding Sequence
atggaacagcagcagtatgTCAAGAGTCTCGGACATCTGCAGactcatcagcaacatcagcagcagcagcagcaacagcagcagcagcagcaacagcagcaacaacacgagcaacaacaacggcaacagcagcagcagcaacaacaaatgcatcaccatcaccatcatccgcaacaacaacaacaacagcagcaacagcaacagcagcagcagcagcagcagcagcaacaacaacagcagcagcaacagcaatcgtCTCGCTCTGCAGCTAGTCCGTTGTCGCCGCCACGTCCTGCACCGGGCAgtgcagcggctgcagctgcagcgaatAACTATGCTAAATTCGCAGATGCGCCGCAGCATTTCATACAGCCAGCGTCATACAGCATCGGCATCGCACCGGTGGCCAACTATCGGGAGAATCATTATATGCGGATACCACCCCAGTTGCAGGCAACGGTGCCGGAATTTCAGCGGGCGGCGCGTGCTGCATCTGTGGCtgccgttgcagctgctgccggtggtgcggccgctgctgctgcagctgttgttgctggtggtcCACCGACaactgcggcggctgctgctgcggcagcggcTGTCCAGGTGCCACCCGGCAGTATGCCACCGCCGGGTGCCCAATCTGGCGGTGTTCTCGTCATGGATGCAATGTCCCATTATCAATCGTTGCAGTATAACAACGAATACCTGACCAATgccgcagctgttgcagcagtcaatcagcgccagcagcaccagcaacaccagcagcaacagcagcaacagcagcaacagcagcagcagcagcaacagcaccaacagtCACTGTCGGAGCCGCCGGGCAGCGTGGGTCAGCCGTATAAGAAGCAGCGCTTGAGCGACGCCAATGCCAGTAACATGAATCACCTGccacaacaccagcaacagcagcagcagcgctctTCACccgctcagcagcagcaacaacaacataacagTCGACAGAGCAATCATGGCGCTGTGTTGCACATGTCcgctgcaggagcagctgcctCTGTTCTCACACCGCTGGCCATGCAGCAGCTCAAAGTGGAAAcgttgccacagcagcaacaacaacaacaccaccaacaacagcagcaacagcagcaacatcagcaacatcaccagcagcagcagcagcaacagcaccaccaacagcagcagcagcagcaacaccaccagcagcaacagcaacaacaccaccagcagctGACGTCACAGGCGCATGCACCACGTGGTCTGGTGGCACCGCCAACGATGTCTACCGCCACTGGCAGCATTGGTTGTGGTCCAGCGCAACATATTAGCTCGGTGAGCGTCTCCTCGGCGGCcatgaacagcagcaacagcagcggtaGCAGCAGTGTTGGCAGCGTTGCacatgctgcagcagcaatggcaagcACATCCGAAGCCTACCATCCTCAGGTGGAGGCCATTTCGCCAACGCTGCCCAGCGACAATGCGGATGAGCGtgggcgcagcagcagcagcagcagtagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaatgctagCAGCAATAAtactagcagcagcaacaacaacaacaagagcagcagcaacagcaacagtaacagtaacagcagcagtagcagcagcagcagcagcaacaacagcaacaataacaacagcgcCAAGGAGGAGCTGCTCATGCAAATCCAGCGTGTGGACAATGACATCAAGAGCGCCGAGACGGCAATGGATGCGCTGCGTAAAAAGGAGAAATCATTGATGGACGAggcagcagcgacggcggcAAGTGctaaacagcaaaagcagcagcagcaacagcagcagcagccgctgtcAATGGCTgcgtcaacgtcaacggcagcggcagcagcagcagcagcgtcagcgtcgGCGCCGGCGACAACTGATGGCACTCAGATTATGGAGCTGGCTTGGCGCACACGAATGCTGGCGCAGAGCATCTATGAGGCGAACCGTAAAACGGCAGCCGAACAACATTCCCTGGTGAGTGCGGCGTTGGGcgtggccaacaacagcaacaacaacgacagtggcagtggcagtggcagtggcgaTGGTGATGGCGATGAGCTGGGAAGATCACGTCCCTGGCTGCCGTTGTACAATCAACCGTTGGATGTGGAGGCGCTGACGCATCTGATTAAGCGACACCAGACATTGGTGCGTAATCCACTGTTGCAGCACATACGCAAACTGAAAGCGGAACGCTGGGAACACAATCAGGGTCTAGTGGATAAATATACCAAGGATCAGGCCGATTGGCAGCGGCGCTGCGAACGGGCCGAGGCCAGTGCCAAGCGGAAGGCGCGTGAGGCCAAAAATCGGGAGTTCTTTGAGAAGGTGTTCACCGAGCTGCGGAAACAGCGCGAGGATAAGGAGCGTTTCAATCGTGTCGGTTCGCGCATCAAATCCGAAGCGGATCTCGAGGAGATCATGGATGGGCTGCAGGAGCAGGCGCTCGAGGATAAAAAGATGCGCTCATATGCCGTTATCCCGCCCCTAATGCACGATACCCGCCAGCGTCGCTGCGCCTATCACAATGAGAACGGTCGTATTTGGGATATGGTCGCGTTGCACGAAGAGCGCAAGGCGATCAATATGTGGACAGCCGGCGAGAAGGAGACGTTCAAGGAGAAGTATCTACAGCATCCGAAGAATTTTGGTGCGATTGCCGCCAGTTTGGATCGCAAATCACCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGTTGCGCAAATCCCGCCAGCGGACACGCAGCAGTCGCCATCCGGCCAaggcgcaacaacagcagccccaATGCATCATCGACTCGCTGACGACGGGCGTGACGACGCGTCTGCAGCgcgaacagcaacagaagtCCGGCAATCGATCCAGTGCCGTTGCCGAGCGTGAGCGGGCTGAGCGTGTTGCCGAACGGGAGCGTGTCGCCGAGCGGGCAGCAGCGGATGCGGCCAAAGCGGCTGAGTGTGCGGCCGAGAAGGCCAGCGCTGTTAGCAAAGCGGCCGAAGCGGCTGCCGGCAGCGAGAAGGTGGCCAAAagtgcggcagcagcagcagcagtagcagcagcagcagcagcagcggcggcagcagcagcagcagctagcgACAAGGCGGGCAAGAAtacaacagccgcagcagcagtggcgACAGAGATCTCAACGGGCAGCAGCGATGCCAAAGCGAAAACCTCTGAGGAGGatacggcagcagcagcagcagcagcaacagcagcaacagcagcaacaacagcaacaacaactgcaaaagcagctgccaaagcggcagcaaaagcaaaagcaggtggtgtagctgcagcagcagcagcaacaacaacctcagtcacagcagcagcagcagcaacaacaacctgtacaacagtggcaacaacagcggcaacaataacaacaacagcagcagcagcagcaacaacaacaacgacagcaacagcgacaacaacaacagcagcagcaacagcagcagcaacggcaatcAGCgaggctgcagctgcagcgacaCCGCCCAAGGCGTCCAAGtcgcaacagttgcaacagccCGATGGGAGTACAGTTCCGGACAAAGCAAAGCCGTCGAAGGCCGAGGCACCatcggaaacggaaacggagcAGCTGGGCAAGCAGAGCAAACCAAAGGCCTCCAATGCCGATAGCTATAACGCCACGGGTGCctcggcaacaacagcagcaacatcggcAGCGGCAGGTGGCACGCTCACAGCAGTGCCCGCGGTTAGTGTGGCGATCAACGGCTTTAAGCCTGGCTACCAGAGCGTCGTTATGGCCAATGTCAAGGCGTCAACGGCCGGAGGCATTGACGATGtcgcaacgacaacagcagcagcagcagcggcgtcgACAAATGCGACTGGCGATAAAATCGTTAAGACGACGCcgacaacagttgctgctgcggctggtTTTGCTGTGCCCAATGCGGCCAGTCAGGCGGAGCCAGTTAGCAGTGTGGCAACGCTGACAACGGCCACAACAGCTGGCAACTATCTGGGCCAAAAGTTGAAGGCGGCGCAGGTGGAAGGACTTGGCGCTGGCAACGAGCTGCACACGGATGTCAGTGATGCCAAGAAGAAACGCTTCGAGCTTGCGCCTGGCGATGTCAGCAGCAATGCTctcagcaataacaacaacaacaacaataacaacaacaatagcaacagcaacagcagcagcagcagcaatttgaaCGCCAACAGCTCCAAACTGAACATCAAGGATGCTCCCAATCAAGTCACATGCAttggcaaaagcaacacaGGATCTGGGCCAGCTTTGGTGCCGGCCGCCgcctcatcctcatcgctgCAGTTTATTGGCTCTGCATCGATTATGtccacaacagcaacgggtGCACGGGGCACAATGGCGACGACGGATCGTGCTGGTAATTTGTTGAGCACCTCCGAGGTTCTGGCATTGGATGGCAAAGGTGAGTGCTACACgttcttttaa
Protein Sequence
MEQQQYVKSLGHLQTHQQHQQQQQQQQQQQQQQQQHEQQQRQQQQQQQQMHHHHHHPQQQQQQQQQQQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPAPGSAAAAAAANNYAKFADAPQHFIQPASYSIGIAPVANYRENHYMRIPPQLQATVPEFQRAARAASVAAVAAAAGGAAAAAAAVVAGGPPTTAAAAAAAAAVQVPPGSMPPPGAQSGGVLVMDAMSHYQSLQYNNEYLTNAAAVAAVNQRQQHQQHQQQQQQQQQQQQQQQQHQQSLSEPPGSVGQPYKKQRLSDANASNMNHLPQHQQQQQQRSSPAQQQQQQHNSRQSNHGAVLHMSAAGAAASVLTPLAMQQLKVETLPQQQQQQHHQQQQQQQQHQQHHQQQQQQQHHQQQQQQQHHQQQQQQHHQQLTSQAHAPRGLVAPPTMSTATGSIGCGPAQHISSVSVSSAAMNSSNSSGSSSVGSVAHAAAAMASTSEAYHPQVEAISPTLPSDNADERGRSSSSSSSSNNNNNNNNNNNNNNASSNNTSSSNNNNKSSSNSNSNSNSSSSSSSSSNNSNNNNSAKEELLMQIQRVDNDIKSAETAMDALRKKEKSLMDEAAATAASAKQQKQQQQQQQQPLSMAASTSTAAAAAAAASASAPATTDGTQIMELAWRTRMLAQSIYEANRKTAAEQHSLVSAALGVANNSNNNDSGSGSGSGDGDGDELGRSRPWLPLYNQPLDVEALTHLIKRHQTLVRNPLLQHIRKLKAERWEHNQGLVDKYTKDQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDTRQRRCAYHNENGRIWDMVALHEERKAINMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRHPAKAQQQQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERVAERERVAERAAADAAKAAECAAEKASAVSKAAEAAAGSEKVAKSAAAAAAVAAAAAAAAAAAAAASDKAGKNTTAAAAVATEISTGSSDAKAKTSEEDTAAAAAAATAATAATTATTTAKAAAKAAAKAKAGGVAAAAAATTTSVTAAAAATTTCTTVATTAATITTTAAAAATTTTTATATTTTAAATAAATAISEAAAAATPPKASKSQQLQQPDGSTVPDKAKPSKAEAPSETETEQLGKQSKPKASNADSYNATGASATTAATSAAAGGTLTAVPAVSVAINGFKPGYQSVVMANVKASTAGGIDDVATTTAAAAAASTNATGDKIVKTTPTTVAAAAGFAVPNAASQAEPVSSVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHTDVSDAKKKRFELAPGDVSSNALSNNNNNNNNNNNSNSNSSSSSNLNANSSKLNIKDAPNQVTCIGKSNTGSGPALVPAAASSSSLQFIGSASIMSTTATGARGTMATTDRAGNLLSTSEVLALDGKGECYTFF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00558604;
90% Identity
iTF_00496540;
80% Identity
-