Basic Information

Gene Symbol
NCOR1
Assembly
GCA_035043205.1
Location
JAWNNE010000155.1:158057-165522[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-07 0.00017 21.6 0.0 3 43 894 934 893 936 0.97

Sequence Information

Coding Sequence
atggaacagcagcagtatgTCAAGAGTCTCGGACATCTGCAGactcatcagcaacatcagcagcagcagcaacagcaacagcagcagcagcagcaacaacacgagcaacaacaacggcaacagcagcagcagcaacaacaaatgcatcaccatcaccatcatccgcaacaacaacaacaacaacagcagcagcagcagcaacagcagcagcaacaacaacagcagcagcagcagcaacaacaatcgtcTCGCTCTGCAGCTAGTCCGTTGTCGCCGCCACGTCCTGCACCGGGCAGtgcagcggctgcagcggcagcgaatAACTATGCAAAATTCGCAGATGCGCCGCAGCATTTCATACAGCCAGCGTCATACAGCATCGGCATCGCACCGGTGGCCAACTATCGGGAGAATCATTATATGCGGATACCACCCCAGTTGCAGGCAACGGTGCCGGAATTTCAGCGGGCGGCGCGTGCTGCATCTGtggctgccgttgctgctgctgccggtggtgcggccgctgctgctgcagctgttgttgctggtggtcCACCGACaactgcggcggctgctgctgctgctgcggcggcggctgtcCAGGTGCCACCCGGTAGTATGCCACCGCCGGGTGCCCAATCTGGCGGTGTTCTCGTCATGGATGCAATGTCCCATTATCAATCGTTGCAGTATAACAACGAATACCTGACCAATgccgcagctgttgcagcagtcaatcagcgccagcagcaccagcaacaccagcagcaacagcagcaacagcagcagcagcaacagcagcagcagcagcaacagcaacagcaccaacagtCACTGTCGGAGCCGCCGGGCAGCGTGGGTCAGCCGTATAAGAAGCAGCGCTTGAGCGACGCCAATGCCAGTAACATGAATCACCTGccacaacaccagcaacagcagcagcagcgctctTCACccgctcagcagcagcaacaacaacataacagTCGACAGAGCAATCATGGCGCTGTGTTGCACATGTCcgctgcggcagcagctgcctctgTTCTCACACCGCTGGCCATGCAGCAGCTCAAAGTGGAAACGttaccacagcagcaacaacaacaacaccaccaccaacaacaacaacaacagcagcagcagcagcaacagcagcagcaacagcagcagcaacatcagcaacatcaccagcagcagcaacagcaacagcaccaccaacagcagcagcagcagcaacaccaccagcagcaacagcaacaacaccaccagcagctgACGTCACAGGCGCATGCACCACGTGGTCTGGTGGCACCGCCAACGATGTCTACCGCCACTGGCAGCATTGGTTGTGGTCCAGCGCAACACATTAGCTCGGTGAGCGTCTCCTCGGCGGCCAtgaacagcagcggcagcagcggcggcagcagcagtgttgGCAGCGTTGcacatgctgcagcagcaatggcaagcACATCCGAAGCCTACCATCCGCAGGTGGAGGCCATTTCGCCAACGCTGCCCAGCGACAATGCGGATGAGCGtgggcgcagcagcagcagcagcagtagcggcaacaacaacaacaacaacaatgctagCAGCAATAAtactagcagcagcaacaacaacaacaagagcagcagcaacagtaacagtaacagcagcagtagcagcagcagcagcagcaacaacagcaacaataacaacagcgcCAAGGAGGAGCTGCTCATGCAAATCCAGCGTGTGGACAATGACATCAAGAGCGCCGAGACGGCAATGGATGCGCTGCGTAAAAAGGAGAAATCATTGATGGACGAGGCAGCAGCGACGGCGGCAAGTgctaaacagcaaaagcagcagcagccgctgtcAATGGCTGCGTCAACAtcaacggcagcggcagcggcagcagcagcgtcagcgtcgGCGCCGGCGACAACTGATGGCACTCAGATTATGGAGCTGGCTTGGCGCACACGAATGCTGGCGCAGAGCATCTATGAGGCGAACCGTAAAACGGCAGCCGAACAACATTCCTTGGTGAGTGCGGCGTTGGGcgtggccaacaacagcaacaacagcgacaacaacgacagtggtagtggcagcggcagtggcgatggcgatggcgatggtgaTGGCGATGAGCTGGGAAGATCACGCCCCTGGCTGCCGTTGTACAATCAACCGTTAGATGTGGAGGCGCTGACGCATCTGATTAAGCGACACCAGACATTGGTGCGTAATCCGCTGTTGCAGCACATACGCAAACTGAAAGCGGAACGCTGGGAACACAATCAGGGTCTAGTGGATAAATATACCAAGGATCAGGCCGATTGGCAGCGGCGCTGCGAACGGGCCGAGGCCAGTGCCAAGCGGAAGGCGCGCGAGGCCAAAAATCGGGAGTTCTTTGAGAAGGTGTTCACCGAGCTGCGGAAACAACGCGAGGATAAGGAGCGTTTCAATCGTGTCGGTTCGCGCATCAAATCCGAAGCGGATCTCGAGGAGATCATGGATGGGCTGCAGGAGCAGGCGCTCGAGGATAAAAAGATGCGCTCATATGCCGTTATCCCGCCCCTAATGCACGATACCCGCCAGCGTCGCTGCGCCTATCACAATGAGAACGGTCGCATTTGGGATATGGTCGCGTTGCACGAAGAGCGCAAGGCGATCAATATGTGGACAGCCGGCGAAAAGGAGACGTTCAAGGAGAAGTATCTGCAGCATCCGAAGAATTTTGGTGCGATCGCCGCCAGTTTGGATCGCAAATCACCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGTTGCGCAAATCCCGCCAGCGGACACGCAGCAGTCGCCATCCGGCCAaggcgcaacaacagcagccccaATGCATCATCGACTCGCTGACGACGGGCGTGACGACGCGTCTGCAGCgcgaacagcaacagaagtCCGGCAATCGATCCAGTGCCGTTGCCGAGCGTGAGCGGGCCGAGCGTGTTGCCGAACGGGAGCGTGTCGCCGAGCGGGCAGCAGCGGATGCGGCCAAAGCGGCTGAGTGTGCGGCCGAGAAAGCAAGCGCTGTTAGCAAAGCGGCCGAAGCGGCTGCCGGCAGCGAGAAGGTGGCCAAAagtgcggcagcagcagcagcagtagcagcagcagcagcagcggcagctgcagcagcggcggcagcagcagcagctagcgACAAGGCGGGCAAGaatgcaacagccgcagccgcagcagcagcagtggcgaCAGAGATCTCAACGGGCAGCAGCGATGCCAAAGCGAAAACCTCTGAGGAGGatacggcagcagcagcagcagcaacagcagcaacagcagcaacaacagcaacaacaactgcaaaagcagctgcaaaagcggcagcaaaagcaaaagcaggtggtgcagctgcagcagcagcaacaacaacctcagtcacagcagcagcaacaacaacctgtacaacagtggcaacaacagcggcaacaataacaacaacagcagcagcaacaacaacaacaacaacgacagcaacagcgacaacaacaacagcagcagcaacagcagcagcaacggcaatcagcgaggctgcagctgcagcgacaCCGCCTAAGGCGTCCAAGtcgcaacagttgcaacagcccGATGGGAGCACAGTTCCGGACAAAGCAAAGCCGTCGAAGGCCGAGCCACCatcggaaacggaaacggagcAGCTTGgcaagcagagcaaagcaaaggcCTCCAATGCCGATAGCTATAACGCCACGGGTGCctccgcaacaacagcagcaacatcggcAGCGGCAGGAGGCACGCTCACAGCTGTGCCCGCGGTTAGTGTGGCGATCAACGGCTTTAAGCCTGGCTACCAGAGCGTCGTTATGGCCAATGTCAAGGCGTCAGCGGCCGGAGGCATTGATGATGtcgcaacgacaacagcagcagcagcagcagcagcagcggcggcgtcGACAAATGCGACTGGCGATAAAATCGTTAAGACGACGccggcaacagttgctgctgcggctggtTTTGCTGTGCCCAATGCGGCCAGTCAAGCGGAGCCAGTTAGCAGTGTGGCAACGCTGACAACGGCCACAACAGCTGGCAACTATCTGGGCCAAAAGTTGAAGGCGGCGCAGGTGGAAGGACTTGGCGCTGGCAACGAGCTGCACACGGATGTCAGTGATGCCAAGAAGAAACGCTTCGAGCTTGCGCCTGGCGATGTCAGCAACAATGCTctcagcaataacaacaacaacaacagtaacaacaacaatagcaacagcagcagcagcagcagcagcaatttgaaCGCCAACAGCTCCAAACTGAACATCAAGGATGCTCCCAATCAAGTCACATGCAttggcaaaagcaacacaGGATCTGGGCCAGCATTGGTGCCGGCCGCcgcctcatcctcatcgctgCAGTTTATTGGCTCTGCATCGATTATgtccacaacagcaacgggtGCACGGGGCACAATGGCGACGACGGATCGTGCTGGTAATTTGTTGAGCACCTCCGAGGTTCTGGCATTGGATGGCAAAGttgaaatcgaTGCGCGCATTGTGGCAGTTGCCGCCAAATTGGACGCTTGA
Protein Sequence
MEQQQYVKSLGHLQTHQQHQQQQQQQQQQQQQQHEQQQRQQQQQQQQMHHHHHHPQQQQQQQQQQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPAPGSAAAAAAANNYAKFADAPQHFIQPASYSIGIAPVANYRENHYMRIPPQLQATVPEFQRAARAASVAAVAAAAGGAAAAAAAVVAGGPPTTAAAAAAAAAAAVQVPPGSMPPPGAQSGGVLVMDAMSHYQSLQYNNEYLTNAAAVAAVNQRQQHQQHQQQQQQQQQQQQQQQQQQQQHQQSLSEPPGSVGQPYKKQRLSDANASNMNHLPQHQQQQQQRSSPAQQQQQQHNSRQSNHGAVLHMSAAAAAASVLTPLAMQQLKVETLPQQQQQQHHHQQQQQQQQQQQQQQQQQQQHQQHHQQQQQQQHHQQQQQQQHHQQQQQQHHQQLTSQAHAPRGLVAPPTMSTATGSIGCGPAQHISSVSVSSAAMNSSGSSGGSSSVGSVAHAAAAMASTSEAYHPQVEAISPTLPSDNADERGRSSSSSSSGNNNNNNNASSNNTSSSNNNNKSSSNSNSNSSSSSSSSSNNSNNNNSAKEELLMQIQRVDNDIKSAETAMDALRKKEKSLMDEAAATAASAKQQKQQQPLSMAASTSTAAAAAAAASASAPATTDGTQIMELAWRTRMLAQSIYEANRKTAAEQHSLVSAALGVANNSNNSDNNDSGSGSGSGDGDGDGDGDELGRSRPWLPLYNQPLDVEALTHLIKRHQTLVRNPLLQHIRKLKAERWEHNQGLVDKYTKDQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDTRQRRCAYHNENGRIWDMVALHEERKAINMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRHPAKAQQQQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERVAERERVAERAAADAAKAAECAAEKASAVSKAAEAAAGSEKVAKSAAAAAAVAAAAAAAAAAAAAAAAASDKAGKNATAAAAAAAVATEISTGSSDAKAKTSEEDTAAAAAATAATAATTATTTAKAAAKAAAKAKAGGAAAAAATTTSVTAAATTTCTTVATTAATITTTAAATTTTTTTATATTTTAAATAAATAISEAAAAATPPKASKSQQLQQPDGSTVPDKAKPSKAEPPSETETEQLGKQSKAKASNADSYNATGASATTAATSAAAGGTLTAVPAVSVAINGFKPGYQSVVMANVKASAAGGIDDVATTTAAAAAAAAAASTNATGDKIVKTTPATVAAAAGFAVPNAASQAEPVSSVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHTDVSDAKKKRFELAPGDVSNNALSNNNNNNSNNNNSNSSSSSSSNLNANSSKLNIKDAPNQVTCIGKSNTGSGPALVPAAASSSSLQFIGSASIMSTTATGARGTMATTDRAGNLLSTSEVLALDGKVEIDARIVAVAAKLDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00558604;
90% Identity
iTF_00496540;
80% Identity
-