Basic Information

Gene Symbol
hang
Assembly
GCA_018153305.1
Location
JAECXX010000141.1:8668756-8679184[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.26 19 5.9 1.0 3 23 281 302 280 302 0.93
2 18 0.85 63 4.3 3.1 3 22 410 429 408 429 0.89
3 18 0.00056 0.042 14.3 3.3 1 22 542 563 542 565 0.90
4 18 6 4.4e+02 1.6 0.1 2 21 577 596 576 597 0.91
5 18 0.00065 0.048 14.1 0.2 2 23 732 754 731 754 0.95
6 18 0.0019 0.14 12.6 0.1 1 23 762 785 762 785 0.96
7 18 1.5e-05 0.0011 19.2 0.1 2 23 870 891 869 891 0.97
8 18 0.00027 0.02 15.3 2.9 2 23 973 995 972 995 0.97
9 18 0.002 0.15 12.5 0.1 1 23 1039 1062 1039 1062 0.97
10 18 0.00012 0.0087 16.4 1.1 1 23 1122 1144 1122 1144 0.99
11 18 0.0018 0.14 12.7 0.9 1 23 1152 1175 1152 1175 0.96
12 18 7.9 5.8e+02 1.2 0.2 2 13 1183 1194 1183 1196 0.85
13 18 3e-05 0.0022 18.3 1.4 3 23 1291 1311 1290 1311 0.98
14 18 0.0047 0.35 11.4 0.1 1 23 1346 1368 1346 1368 0.97
15 18 0.00056 0.041 14.3 0.6 2 23 1450 1472 1449 1472 0.93
16 18 2.2 1.6e+02 3.0 0.1 2 20 1492 1510 1491 1512 0.91
17 18 0.0062 0.46 11.0 0.4 3 23 1527 1547 1527 1547 0.98
18 18 0.00031 0.023 15.1 1.9 1 23 1849 1871 1849 1871 0.98

Sequence Information

Coding Sequence
ATGGTGTTCCAATGTTGTCACATTAAAGTGCAATCCGCGGGACTGGGGAATCCTTCTATCCTGTATCCAATTGCACAGGGAAACATGGCGGCCATAAAGGAAACGCTGGTTTGGATTACACCCCAGGATCGACTGTCGCTGCAAATTTGCCACGCCTGCATCAGCTACCTGAACTCATGGCAGAGCTTTAAGAACCGCTGCTTCAGCTCCCAGACGAAGCAACGCCAGTGGCTGGAGGCCAACAAGAGCAAGCTCTTCAACTACCTGGACCTGAACATGCCTCCGTTGCCACCGCTGCCATCGCTGCCACCAGTGGCTCCAGGACCCATTGCTCCACCTGCTGCTGTCGAACTGCTGCCCGGGATGTCTGGTGTGGGCGGAATGGAGAGCTTGCCGCTGTCGCTGCCACTTGATTTCAGCCAAAGCTGCAGCAGCAGCGGTCACGTCCAACAACAGCAGGCTGGCGGTCTGGCCACGACGACGTCCACGTCCAATCCGCCGGGCAACGTTGTTTCCGCCACGACCTCTGGCTCGGCATCTGCATCCGCATCCATGTCGACGGCACCGCTGCTAATGCCGCCACTGCCTGCAATCCCCATCAAAGATGAGCCCATTGACACGGATGACGACTATCAAATGAAGTCAATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCGTTGACGGCCTCGGACTACGACTATACAGCTCAGCATGGCGTGAATGCCTCGTCCGCAGCAGCCTCGCTGCCGGCGAATGCGGTGGCCAATGTGGCTGCCGCCGGGGACTCCAAGGTGGCCAGCTGCCGAGCCTGCAGTCTGCAGTTCTCCACCCGGGCCAACGCCCGTCGCCACGAACGCAATCTGCACCCGAACCTGTTCCAGCTTTCCACAGACTCGCCCCACAACACGCCCATTACGAAGCCCACACCCGCCCTGGCTGCCGCCTTGGAAATCCAACGGGCGGCAGCGGCGGCGGCCACCGCGGAGGCAAACCGAGCTGCGGGTGCCGCTGGCGGGAATATCTCTACGCAAAAATACCGTCAGGTGGTGATGAACGCCTTCATCAAGTGCGAGGGCGGCGGCTATGACTACGATAATCCCGAACTGTACCAACCGCTGCTCACACGCGACAAGGTGGAGTTCATCGAGCAGAACGACGAGTTTCTCGAACAGTACCAGACGATGACCTGCCGTTGCTGCAGCAAGTACTTCAGCACGTACAAGAACTTTATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAATTGCCTAAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTGAAGAAGCGGAACTGCATTAATCTCTTCAGGGTTTTAAATGCGCTGCGTGGCAAGACAACGGCCGTGGTTGTAAGCACTGCCGAGGATCTGCCAGCCGAAGGAGCGGCAGAAACCGTTGTGATTGCCGATGCCGGAGCAGGAGTGGTGGCCATGACCAGTCCCACAGTGACCGCCGGCGGAGATGGCGGCACACCCGGCGCTGGCTCCGAAAGGCCGGAGAAGCTGCGCGCCAAGGAGCTGCTGGTTAACAAACTGTACGAGTGCAAGCTCTGCCCCAAGGGATTCCGCACCAAGCACGAGTTCCGAACGCATGTGTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGACACAGTGCAGCTTTTGCGGACTGGACATCGCCGATCCGGTGGACAGGCGGCGGCACTACAATAACATGGATTGCATTGTCCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCACCAGCGATTCCTTGACCACGTCTACCAGGATCACTTGGGCGGCGTGGGTGGCGGGGCGAGCAGTGATAATGCCTCCACCACGGGCAGCGGTATGGCCAGAAGCAACAGCATGGAGCACTCGCCGGGCAAGAGGAGCCTGCTCGGCGCCTTGGGCATTGGTGTCGGCTCCTCAGCGGATGAGTCGCGAAGCAGCAGTGCGGCCCCGCCGCTGACCTCTACACCAAAGCTGGCGGGAGCAGCGCAAGCGGGTAGCGGCGGCTCCCTAAGCGCCTCAGCCTCCGCTCTGAGCTCGGCAAATCGAGATGCGGCCGCACCCAAGTCCCAGTACTTCTCCAGAATGCCGCAGGTATGCCCCATTTGCGGCCAGCAGTACAACAACTACAACAATGTGCTGCGCCATATGGAATCTAAACATCCGAACAAGCTGCCAGAAACATACAAATGTGTGCGATGCGGACTGGGGTATCCCCGGATCTCCTACCTACGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGGCACTCCGGCGGCTTCGAGTACATCGTGAATGCGGATGCCGTAAAGTTGGCGGACGGAAGCACGCCAAACGTATACACGGGTCGCTACGACTACGTGATGAAGGACCTTATGTCGATAACAAATGGTGGGACACTCGATGACGAAGAGGAGGAGCCTGGCAGCGTGGCCAAGAAGATGCGCCTGGACGACAGCAGCAACAACAGCAGCCTGGTGGGCGTGGCCAGCCAGCAAAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCCTGTCCAATCATATGCGCTCCCACTACACGGCCTCGAATGCGGTGAATGCGGCTCTAGCGGCTGCCAATCGGATGACGCCGAAATCGCTGACCATTACCGCAACACCAGCGGCGGATTCGGAGGTTGAACTTTTGGCGGCGTCATCGGTTTCTGCCCCAACAACTCCTGCCAATGTGCCACCGGCAATGGCCAACCAAACGCCCCAGGAGCAGGCCGTTTTCCGACGAAGTCTCGACCAGGCGGCCGATCGTCGCTTCCGCCGGATGCGGTGCCGCATCTGCCAGCGGCGTTTCAGCTCGAAGAAGTCATATCGCTACCACATGCTCACCGATCATCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTGCATCTGTTCAAGGTGCACGGACGTGCCATTAAGGACGAAATGATCATCAAGCAGTTTGAGTGCGAGGTCTGCTCAATTGTCTACAGTTCGGAGCTGGAGCTGCAGCAGCACAAGCGCAGCGTCCACAAGTTGGCCTCGGCATCGGCATCCACTTCGGCGTCCACGTCCTCCAAGATTGACGATGACTCGCTGATGGACGAGGCCAAGCCTACCGCATCGGATCTAGCTAATCTCGCCACGCTCGCTGCCGGAGCAGCCGCTGCATCTGCTTCGGGTCAGGGATTGGGCACTCCGCTGTACTGGTACCAGTGCAAGTACTGTCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAACGATTACTCCTGCAAAGATTGCGGCAATGTATATAGCGGACGCAAGAGTCTATGGGTGCATCGCTACAAGAAGCATCCGCAAGTACCCGACCCAGCCGAGTGCTCGCTGTGTCGGAAGGTCTTCTTCGACCGCCAGATGCATGACAACCACACACCCACCTGCAACCGCAAGCCGATCACCTCGACCGGTGCCCACCAGCAGCAGGAGCCGCAGCTGCAACAGCAGGCGTCGCTACAGCCGGCCAGACGAACCATTTTCCGGCACAAGACCGGCGATGATGAGGACGAGGAAGAGGACGATGACCAGCAGCAGCTGGATGATAGGGCTAACAGCGACGGCAACGGGACGACGTCGGGAGTTGCTTCGGGGAGTGCTGTGGTCGCGGCCACATCGATGAAGATACGCATTCCGGAGGTGGCCTGCACCATTTGCGGGGCTCGCTTCACCGACCAGGAGCACTTCAGCAAGCACATCCAGAAGCACGAGCAGGAGCTGTACGTGGACAATCCGCTGGCAGCGATGTTCGATGATGGGCCGGCGGATGCCGGGCAGTTCCAGGTGGAGCGACAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACTTTCCCCCAGGTGATCGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACACCAACAACAACAACAACAACTCGATGTTGCACCTCCGCGAACTGCATGCGGTGGGTCTGATGCCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAGCTGAAATGCGAATACTGCGCCTCCACCTTCATCAGCAACAACAATCTGCGTCGCCACATGTACGAGCTGCACAAACACGAGGTGAGCAATCTGCCGGAGCCGCCGATAATCGTTGTAGACGATCACCTCACCTGCCGCCGCTGCGAATTGAAATTCGAGACCAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCAAAGGTGGTGCGACCCTTCTGCCCCTTCCAATGGGGCTGCGATCTGTGCGGCGAGTACCTGTCGCGCAAGGAGAAGCTGATGAACCACATCAACAACCATCTCAAGGAGGAGGTCATCGTGCCAGTGGCCACCAAGGCGGCCATAGAGAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGTTGGAGATTCGCGAGGAAGAAGACAGCGATGAGCTGGACGAGGAGGACAGCTCGGGCGAAGAGGAGGAGAGTTCAGGCACGGGTGATGATGAGGACGACGACACCGACGATGAGGACGGCGAGGGAGAAGATGAGGACGAGGAGGGCGACGGGGGTGAAGGCGAAGACGAAGAAGGTGTGCAGCCACCTGGACAACTGTTGCCACAGAAGCAACACAAAGAGAGTCTTAACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAGCCGGAGCCAGTAGCATTGCCAGTGCGACCGCTAATGAATGGCAAGTCCAAGATGCCGCCGCTAATCGTGGCCAGCTCCGATGATGAGGACGATGTTATAATGCCCATAGAGGACATCATCGAAGAGGAGTATGATGAAGATGCCGATCCGGATCCAGATCCGGAGGATGCCATCGAGGAGGTAGACGACGATGATTTAGATGAGGGGGATGTGGAGGACGAGCCGAATGTGGTGTCGACGGCCTCCTCCTCGGAGAGCGAGTCCACCACAACGACCACGTCCAATTCGCATTCGCGTTCCACGGGTGAGCGGCGTAAGAAGGCCGACGATCAGTTGAATGATCCCGGCTTTACCTGTGTTCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTCCAGAGCCACATCAAAAGCCATATCCTCAATGGGCCAAAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGA
Protein Sequence
MVFQCCHIKVQSAGLGNPSILYPIAQGNMAAIKETLVWITPQDRLSLQICHACISYLNSWQSFKNRCFSSQTKQRQWLEANKSKLFNYLDLNMPPLPPLPSLPPVAPGPIAPPAAVELLPGMSGVGGMESLPLSLPLDFSQSCSSSGHVQQQQAGGLATTTSTSNPPGNVVSATTSGSASASASMSTAPLLMPPLPAIPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPELYQPLLTRDKVEFIEQNDEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLFRVLNALRGKTTAVVVSTAEDLPAEGAAETVVIADAGAGVVAMTSPTVTAGGDGGTPGAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSTQCSFCGLDIADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGASSDNASTTGSGMARSNSMEHSPGKRSLLGALGIGVGSSADESRSSSAAPPLTSTPKLAGAAQAGSGGSLSASASALSSANRDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAADSEVELLAASSVSAPTTPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQXXXXXXXXXXXXXXXXXXXXXXKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLASASASTSASTSSKIDDDSLMDEAKPTASDLANLATLAAGAAAASASGQGLGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQQQEPQLQQQASLQPARRTIFRHKTGDDEDEEEDDDQQQLDDRANSDGNGTTSGVASGSAVVAATSMKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTNNNNNNSMLHLRELHAVGLMPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPIIVVDDHLTCRRCELKFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEIREEEDSDELDEEDSSGEEEESSGTGDDEDDDTDDEDGEGEDEDEEGDGGEGEDEEGVQPPGQLLPQKQHKESLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPEPVALPVRPLMNGKSKMPPLIVASSDDEDDVIMPIEDIIEEEYDEDADPDPDPEDAIEEVDDDDLDEGDVEDEPNVVSTASSSESESTTTTTSNSHSRSTGERRKKADDQLNDPGFTCVLCQLCFDSQELLQSHIKSHILNGPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605750;
90% Identity
iTF_00494536;
80% Identity
-