Basic Information

Insect: Drosophila buzzatii
Gene Symbol: -
Assembly: GCA_035045845.1
Location: JAWNOS010000129.1:263291-270545[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.001 0.081 13.6 3.7 1 21 242 262 242 264 0.94

2 18 8e-06 0.00063 20.3 0.4 1 23 270 292 270 292 0.97

3 18 0.0012 0.092 13.5 0.9 1 23 298 320 298 320 0.95

4 18 1.7e-05 0.0013 19.3 3.1 1 23 326 348 326 348 0.97

5 18 3.8e-05 0.003 18.1 4.7 1 23 354 376 354 376 0.99

6 18 7e-05 0.0055 17.3 5.7 1 23 382 404 382 404 0.97

7 18 3.4e-07 2.7e-05 24.6 4.3 1 23 410 432 410 432 0.98

8 18 1.2e-07 9.7e-06 26.0 2.4 1 23 438 460 438 460 0.97

9 18 7.2e-05 0.0056 17.3 6.7 1 23 467 489 467 489 0.97

10 18 0.00013 0.0098 16.5 6.5 1 23 495 517 495 517 0.98

11 18 1.1e-05 0.00088 19.8 4.5 1 23 523 545 523 545 0.98

12 18 8.1e-06 0.00064 20.3 8.1 1 23 551 573 551 573 0.98

13 18 6.6e-06 0.00052 20.5 7.6 1 23 579 601 579 601 0.97

14 18 7.4e-07 5.8e-05 23.5 7.7 1 23 607 629 607 629 0.98

15 18 0.00023 0.018 15.7 9.5 1 23 635 658 635 658 0.95

16 18 8.2e-05 0.0064 17.1 0.9 1 23 664 686 664 686 0.98

17 18 0.00089 0.07 13.8 3.4 1 23 696 718 696 718 0.97

18 18 1e-05 0.0008 19.9 1.6 1 23 724 747 724 747 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.001	0.081	13.6	3.7	1	21	242	262	242	264	0.94
2	18	8e-06	0.00063	20.3	0.4	1	23	270	292	270	292	0.97
3	18	0.0012	0.092	13.5	0.9	1	23	298	320	298	320	0.95
4	18	1.7e-05	0.0013	19.3	3.1	1	23	326	348	326	348	0.97
5	18	3.8e-05	0.003	18.1	4.7	1	23	354	376	354	376	0.99
6	18	7e-05	0.0055	17.3	5.7	1	23	382	404	382	404	0.97
7	18	3.4e-07	2.7e-05	24.6	4.3	1	23	410	432	410	432	0.98
8	18	1.2e-07	9.7e-06	26.0	2.4	1	23	438	460	438	460	0.97
9	18	7.2e-05	0.0056	17.3	6.7	1	23	467	489	467	489	0.97
10	18	0.00013	0.0098	16.5	6.5	1	23	495	517	495	517	0.98
11	18	1.1e-05	0.00088	19.8	4.5	1	23	523	545	523	545	0.98
12	18	8.1e-06	0.00064	20.3	8.1	1	23	551	573	551	573	0.98
13	18	6.6e-06	0.00052	20.5	7.6	1	23	579	601	579	601	0.97
14	18	7.4e-07	5.8e-05	23.5	7.7	1	23	607	629	607	629	0.98
15	18	0.00023	0.018	15.7	9.5	1	23	635	658	635	658	0.95
16	18	8.2e-05	0.0064	17.1	0.9	1	23	664	686	664	686	0.98
17	18	0.00089	0.07	13.8	3.4	1	23	696	718	696	718	0.97
18	18	1e-05	0.0008	19.9	1.6	1	23	724	747	724	747	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCTCCTTGGGCGGACCGCCGCCATTGCCCGGCAACAAGTCAGATCATAAAGAAGACGGCAGCAAGCCGCCACACGGTATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAGTTATTTACATACCACGAGGTATTTGGCAAGATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGTCAGTTGCCACCACCGCAactgccaccgccgccgccattACCACCGCAGACGACGCATTCGGCtagcgcagctgcagctgcagcggcggtATCCACAAATAATgcagccgttgctgctgtaatGGCATCAGCCAATGCAGCcgccgcagctgcagcggccgCGGCCACggcccaacagcagcagcaacaacaacaacagcagcagcagcaacaacaacaacagcaacagcaagccCCAGCGACAAGCACAAATGCTGGAAGCCAACAGGGCAGCGCCACGGTGACCACAACTAGCTCCTCCGGCAGCAATGGTGGAAATGggggcaacaacaatgcgacaacaacgacgacgggTGAGTTGCTAATGCCGAAAATGGAGGGCGGCATCCATGGCGTTGATGGGCAATCGAGCGTTGCACTGGCCCCAGATGGCACGCCCATAGCGACTGGGACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAATTTCGCTATCAGCTAATTGTGCACCGTCGCTGCCACAGCGAGCGCAAGCCGTTTATGTGTCAGGTATGCGGTCAGGGTTTTACCACATCGCAGGATTTGACCAGGCATGGCAAGATCCATATTGGCGGTCCCATGTTCACTTGCATTGTCTGCTTCAATGTGTTTGCCAATAATACGAGTCTGGAGCGCCATATGAAACGGCATTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTCAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGTGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACGCGCAAGGAGCATTTGACGAATCATGTCCGCCAGCATACGGGCGATTCGCCGCATCGTTGCAGCTACTGCAAGAAGACCTTTACCCGCAAGGAGCATTTGACGAATCATGTGCGCCTGCACACTGGAGATTCGCCGCACAAATGCGAATACTGCCAGAAGACGTTCACGCGCAAGGAGCATCTCAATAATCATATGCGCCAGCACTCCAGCGACAATCCCCATTGCTGCAATGTGTGCAACAAGCCCTTCACACGCAAGGAGCACTTGATCAATCATATGTCACGCTGTCACACCGGCGATCGTCCCTTCACCTGCGAGACATGCGGCAAATCGTTCCCACTCAAGGGCAATCTCTTGTTCCATCAGCGCAGCCACACCAAGGGCCAGGAGTGCGAGCGTCCATTTGCCTGCGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTAGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCAGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCATTCGGCGACGACCACAATGCACACCATACAGCAGATAACAGCGGGCGCTGCAGCCGCTGGCGCTGGTGCCGTCCAGCTGACGCCCGGCCTGGTGCCGCTCGTCACCAGCACGCTCATCTCCCATAATGCCCAACAgtcgcagaagcagcagcagcaggtggctgctgcagttgctgcccagcagcaggcggcagccgcagccgccgcTCAACAGCAGGCAGCCgcagcggcgcagcagcaagcggcggcggcagcagcacaccagcagcatcagcaacaggtggctgcacagcagcagcaacaacagcagcaggcagcagttgctgcccatcagcagcagcaacagcaactgcagcagcaacagttgctgcaatTGTCCATACAGCAGGCGgcgcatcatcatcagcagcaacagcagcatcaacaacagcagcagcagcaacaacaacagcagcagcaacagcaacatcatccACAGCAACAGGCGCATCCACAAGCgccgccacagcagcagcagcaacaacagcaacagccgccgCCACAGGTGCCCATTGCATTGATAAGTGATCCAAGCGCGCTGGCTCGTGCCGCCATGCAGTTGCAGCATCTGCCCACAAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTISLGGPPPLPGNKSDHKEDGSKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAVSTNNAAVAAVMASANAAAAAAAAAATAQQQQQQQQQQQQQQQQQQQQAPATSTNAGSQQGSATVTTTSSSGSNGGNGGNNNATTTTTGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRCHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLISHNAQQSQKQQQQVAAAVAAQQQAAAAAAAQQQAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQQQQHQQQQQQQQQQQQQQQHHPQQQAHPQAPPQQQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00479608;
80% Identity: -