Dbuz004904.1
Basic Information
- Insect
- Drosophila buzzatii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035045845.1
- Location
- JAWNOS010000169.1:697871-709623[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-79 1.4e-74 251.4 13.7 93 299 18 214 12 215 0.98 2 2 0.031 6.5e+02 -0.4 3.8 218 241 241 264 217 289 0.49
Sequence Information
- Coding Sequence
- ATGTATAGCGTTCTTGGTTATACTCTACCTCCTGAGCTAATGCTAAAGCCGATGGACGTCGAAGAACGTTTTCGAAAAGCGATGATTACGAATGCTCAACTAGACAACGATCGCTCATCACAAACCTATGAAGTAAAATTACTTAAAGACAAAAGTGAAGCGATGCAAGAATCTCTTGCTCAATTGCAAcgtgaatttaaaaataaactccGCGATTGCAGTGCCCTTAAACGTAGCTTAGATCGCACAACACTTGAATTAAACCTAGTGCAAGGTCAACTAAGTGAGCGCGATACACTAATAGAAGAACACGgccttgttattgttgctattgaaaATAATGATGGTAGTGATGCGAAGCGCGCTCTAGTCAGTGTTGAAAACGCCAATGTGCTTTCAAGTGTTCAGGGTTCTCTTGatgTAAGAATTAAAAAGTTTACAGAGGAAAAGCAGCGCCTtcttaatgaaatgcaaaatctGCGTGAACAGCTAGatgcttttaaaaataaaggcAGGCCTGGCCGAGGCACTCTACTAAGTGACTTTTTAGGGTGTGATGATGACTATGATGCTCAGAgagaatcaaataaaatcatttccgattataaatataaactacaAAAAGCTGAACAAGAAATCGCAAGTCTTCAGGCAAACTTGGCGCGCTCAGAGACACAAGTTATACGTTATAAAAGTACCGCTGAAGCTGCTGAAAAATCTGAGGCTGAACTGAAAGTAGAAAGACGTAAACTGCAACGTGAGCACCGGGAGATTTTGGAACGTTTGGAGGAAGCAGAAACTGCCAATAATCATCTACTTAAACGTCttgacaaattaaaaaatgcaaaaagcacAATATTGAAAGAGTTATGA
- Protein Sequence
- MYSVLGYTLPPELMLKPMDVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSEAMQESLAQLQREFKNKLRDCSALKRSLDRTTLELNLVQGQLSERDTLIEEHGLVIVAIENNDGSDAKRALVSVENANVLSSVQGSLDVRIKKFTEEKQRLLNEMQNLREQLDAFKNKGRPGRGTLLSDFLGCDDDYDAQRESNKIISDYKYKLQKAEQEIASLQANLARSETQVIRYKSTAEAAEKSEAELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802834;
- 90% Identity
- iTF_00473054;
- 80% Identity
- -