Basic Information

Insect: Drosophila bunnanda
Gene Symbol: -
Assembly: GCA_008042815.1
Location: VNKE01003950.1:703058-708764[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00051 0.036 14.4 2.0 1 23 683 705 683 705 0.98

2 8 8.7e-05 0.0061 16.8 1.4 1 23 737 759 737 759 0.97

3 8 0.17 12 6.5 0.4 1 19 767 784 767 790 0.81

4 8 0.0016 0.11 12.8 0.0 3 23 797 818 796 818 0.96

5 8 0.00017 0.012 15.9 3.5 1 23 824 846 824 846 0.97

6 8 0.011 0.79 10.2 0.2 1 23 853 876 853 876 0.95

7 8 0.00021 0.015 15.6 2.2 2 20 883 901 882 904 0.91

8 8 0.056 4 8.0 9.1 1 23 910 933 910 933 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00051	0.036	14.4	2.0	1	23	683	705	683	705	0.98
2	8	8.7e-05	0.0061	16.8	1.4	1	23	737	759	737	759	0.97
3	8	0.17	12	6.5	0.4	1	19	767	784	767	790	0.81
4	8	0.0016	0.11	12.8	0.0	3	23	797	818	796	818	0.96
5	8	0.00017	0.012	15.9	3.5	1	23	824	846	824	846	0.97
6	8	0.011	0.79	10.2	0.2	1	23	853	876	853	876	0.95
7	8	0.00021	0.015	15.6	2.2	2	20	883	901	882	904	0.91
8	8	0.056	4	8.0	9.1	1	23	910	933	910	933	0.96

Sequence Information

Coding Sequence: ATGGTCGGCTTCAAGCGGAAGTTGgttGATCAGTCACTAAATCTACTGGACAGCCTCAACACGGCATTGCGGTGCGATGCTATTCAATTTTTGCTGCAGACTCTTAAGTGCAAATATCCGGAGGCCTGCGACCAAGTCGTCAGAAATCTGTTCAGTCACATAGCTGCAGGCAATGACAGCgacggaggcggtggcggcgggactcagcagcaggagctagCGAGGACgaagcagctgcagttgctgctgaccgccaagaaggagaagaaggaacCGGGAACGGGAGGGGAGGCTGAGATTAAGCGCGAGAACGACGATGATGAGGCTGGATCGACAGATCTGAACCAGAACTTTGAGAAGATCCTCTGCAAGGAGGAGTTCCTGTGcctcgaggaggaggaagaggattTCCTTGACGATGCTGATACCCAAAACTCGTCTTCCCTGCAGTTTAATGCTGGCAACAATGTGGACGCCCTGGCCCTAGGCCCCGGCGATCCGCTAGACCTGATCCACACGGGGAGTTCCCTATTGGTCAAGCGGAAGTATGCTGCTACCTTCGAAGACGAGGACCAGCTAGCCGAGGATGCGAACAGCAATAGTAGCGATGGCAAGCTGGTTAAGAGGAAGCGCACCAACAACATGCACCTGACCGTGACCAGTGTGCGGCGGAAAGAGGCACGCTCCCGGCTGGGAGAGGGGTACATCTTTCACGAGGACAGCCAGTACACGATGCGCTATCACCACAGCACCGGCGAGTTCAGCGAGCGGGCCTTCAAGGCCCAGTTCCGGGCTTTGCTGCGCATTGCGCTCAGCCAGCACCACAAGCCCTTCCTGCGGCAGTTCTACGAGAACTTTGTGGTAAACGGGCGCCTGTTGGGTACCACGCCGTCGGCTCGAGTTCTCAAGGAGCTGCGCGAGCAACGGGTTGAGGAGTGGCGTCGTCATCGGGAGCGCCGTCAGTTGGTCAGCATGATGAAGCAGAGTGAACAGAAGTTAGAAGAGattcagcaggagcagcagcgggaggaaattcagcagcagcagcagctggaagagattcagcagcagcagcagctggaggagattCAACGGCAGCATCAGTTGCCGGCCATCTCGTTTGGCGACTCCGAGCTGGAGTCGGAAACGGAATCGCAGCTGTCGTCGGCTGCTCAAGAGATTATGAAGTTTGAGGAGTTCATTGACGAGGGTGTAGGCGCAGGACGTCTGATTGATGGTCTGGAGATGGAGCTAGAGACCGATGACATGTTAGCTGGCGCTGGCAGTGTCCTGGACAGCGTGAATAGCGCCAGCggacacagcagcaacagcagcagcagcgggagtgGGAGCGGCGCTAATGGGAATGGCATCAGCAGCGGGGTGGTCCTGGAGAACAATAGTCATCATTCGCATCACCTCTTACACTGTCCGCAATTATCGCTGCAGACGCAGGATCAGACGGGAGCGTCCTTGAAGCCGTCACACCACTTGCCAATGTCCATGTCTTTGGAGAACAGGGATGCAAAGAGCGGTCAAGCCCTTGGCAATGCCAATGTGAGCATGCCGAGCAGCAGCTCGGGTCACGCCAGCGAGattcagcagcatcagcagcaaaaCCACTACAACTCAAGCAATAATCCCCTAAGCATGATGGGTGGAATGatgcaccaacagcagcagcaacatgtgaGCATGCAACAACAGCATCAGATGATGCAAGGACAGGGGTTTCCCCAGCATGGAACTTCCATGATGGTCAACCGTCAAATGCCCGCTCTGGCTGCTTTGTCGAATCTGGGCGACACTCCTCCTATTAGCAGCCAGTTAAACTCCTCTCTGGAGCTGGACGACAACGACTTGTCTCCAGACGAGGATGACGACGACCTGGAGCATGATCTGGACGAGCTGGAAGCGGCCAAACAGCAGCTGATCGATGGCGGCAGCAGTAGTAGCACCTCCCTGCAGGCGCCGCCATCGCAAcacggcagtggcagtggcggtAGCGGGGGTCAGACGCCCGgcagcaagaaaaacaagcCCAGCTACAATTGCCTGCTCTGTCCAAAGTCTTATCGTAAGAGGAAGTCCCTGCTAGACCACTATAAGATGCATCCCGGTTTCTGTCACGATTGCGGACAGCCCAACGGAAATACGTTAGCGGAAGTAATACTCCACAATAGGACGATGCATGTGAAGGAGTTTCCTTTCGTGTGCGAGACGTGCGGAGAGTCGTACTCGCGGAAGCAGCAGTTCCACGCCCACGTGGAGTCGCACAACAAGAAGGAAATCAAAAcatttcccTGTGGCGAATGCGGGGTGAAATTCCCGCAgaagaagctgcagcagcacttCGAGGAGACGGGCCACAAGGCCGACGGGGCCATTTGCGAGGTGTGCGGCGAGGAGTTCCAGTCGAAGAACGCCCTTTACCAGCACATCATTCGCGTTCACAAGCGCGACAACTTTTTCGAGTGCCACATTTGCCATAACCGCTTCACGCTAAAGGCGAACCTGGAGCGGCACGTGCAGCTGCACACCGAGGTTAAACGACCCTACGTGTGCGACCTGTGCGGCTCATCCTACTACACATATCCCGCGCTCAAGGAGCACTATAGCAATGCCCACGTCGACGTGTCCGAGTGCAAGTGCACGCTGTGCGGCAAGCGCTTTGGATCGGCCAAGTCACTCCAAAGGCACTTGCCTTCGCACTCGGAGGAGCGTCCCCACTGTTGCAATTATTGCGATCAGACTTTTAAGTGGAAAACGCATCTAGTGCGCCACAAGCAAACAACGCACGGAAACGAGCCTCCGCCCCCTAAGAAGGGAAAGCAGCGCTTCCCCAAGGCGAACGAAGAAGAAATGGCTTCCCTGCCGGATATGCCGGGACCACCGCCTGTAAAGGCCAGTAAAAAGGCGGTGACGAGTAAAGCGAAAGCGCAAGCGGCAGTCGCCGCAGGAGGGACCTCCCagctgcagcatcagcagaagGGCGTTGCAGCCACGCCgacgccaccgccaccggtATCCACGACTCCGGGGTGCATGCAACAAGATCAGTTTAATGCGGCCATGGTCAGCAGCAATAGCTCGCAGTCCTCTACGGCGTCCACATCGCAGCACTCGctgcaacagcagcaggcacagccACACTTCAGCTCCCCCCACCATATGCCGCCTatgcaccaccagcaccagctaatgatgcagcagcagcaccgccaCAATCAGCGTTCGCCGCTGCATCACCACCCGGCAGCccagcaattgcagcagcagcatcaacaaccgTCGCATTCCCCCCAGCATGCGAGACTGCAGTCGCCTCAACCTGCTCCagtacaacaacagcaacaacaattccTGCAGCAACAGGCCTCTGACTCCTGGGGCAACATGAACTTTGGCAATACACCAAACAATCAGCAAGTGGAGCTCAAGGATAACAAATTCTATATCGTAGACTCCGCCGACGTCTACGACCGGACGGGAGTTGGCGTCGGAGTCGGAGTGGGCTATTCCATGCTGGGGGATGAGTCAAAGGCGGTGCTGCCGCCGATGATGGGCGGCATGATGCAGCAATTGCCACCGCATGGCCAGCAACCGGACTTAATATACTACCCAGTGAAGAACGATTGA
Protein Sequence: MVGFKRKLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPEACDQVVRNLFSHIAAGNDSDGGGGGGTQQQELARTKQLQLLLTAKKEKKEPGTGGEAEIKRENDDDEAGSTDLNQNFEKILCKEEFLCLEEEEEDFLDDADTQNSSSLQFNAGNNVDALALGPGDPLDLIHTGSSLLVKRKYAATFEDEDQLAEDANSNSSDGKLVKRKRTNNMHLTVTSVRRKEARSRLGEGYIFHEDSQYTMRYHHSTGEFSERAFKAQFRALLRIALSQHHKPFLRQFYENFVVNGRLLGTTPSARVLKELREQRVEEWRRHRERRQLVSMMKQSEQKLEEIQQEQQREEIQQQQQLEEIQQQQQLEEIQRQHQLPAISFGDSELESETESQLSSAAQEIMKFEEFIDEGVGAGRLIDGLEMELETDDMLAGAGSVLDSVNSASGHSSNSSSSGSGSGANGNGISSGVVLENNSHHSHHLLHCPQLSLQTQDQTGASLKPSHHLPMSMSLENRDAKSGQALGNANVSMPSSSSGHASEIQQHQQQNHYNSSNNPLSMMGGMMHQQQQQHVSMQQQHQMMQGQGFPQHGTSMMVNRQMPALAALSNLGDTPPISSQLNSSLELDDNDLSPDEDDDDLEHDLDELEAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKNKPSYNCLLCPKSYRKRKSLLDHYKMHPGFCHDCGQPNGNTLAEVILHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGVKFPQKKLQQHFEETGHKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRPYVCDLCGSSYYTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTTHGNEPPPPKKGKQRFPKANEEEMASLPDMPGPPPVKASKKAVTSKAKAQAAVAAGGTSQLQHQQKGVAATPTPPPPVSTTPGCMQQDQFNAAMVSSNSSQSSTASTSQHSLQQQQAQPHFSSPHHMPPMHHQHQLMMQQQHRHNQRSPLHHHPAAQQLQQQHQQPSHSPQHARLQSPQPAPVQQQQQQFLQQQASDSWGNMNFGNTPNNQQVELKDNKFYIVDSADVYDRTGVGVGVGVGYSMLGDESKAVLPPMMGGMMQQLPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00533319;
90% Identity: iTF_00594078;
80% Identity: -