Basic Information

Insect: Drosophila bunnanda
Gene Symbol: L
Assembly: GCA_008042815.1
Location: VNKE01001918.1:307066-314450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.4e-06 0.00067 19.9 2.9 1 23 158 180 158 180 0.98

2 17 0.14 10 6.7 7.3 1 23 186 208 186 208 0.97

3 17 1.6e-07 1.1e-05 25.5 3.2 1 23 214 236 214 236 0.99

4 17 1.2e-05 0.00082 19.6 0.4 1 23 242 264 242 264 0.99

5 17 0.011 0.79 10.2 0.2 2 23 348 372 347 372 0.92

6 17 0.0014 0.099 13.0 0.4 2 23 394 416 393 416 0.96

7 17 0.057 4.1 8.0 0.7 1 23 502 524 502 524 0.97

8 17 0.0039 0.28 11.6 0.1 2 23 532 553 531 553 0.92

9 17 8.6e-05 0.0061 16.8 0.4 1 23 561 585 561 585 0.94

10 17 4.6 3.3e+02 2.0 0.9 2 23 621 643 620 643 0.94

11 17 0.0024 0.17 12.3 1.1 1 23 688 711 688 711 0.97

12 17 0.0046 0.33 11.4 1.2 2 23 894 916 893 916 0.96

13 17 0.037 2.6 8.5 0.1 1 23 922 944 922 944 0.92

14 17 0.045 3.2 8.3 0.1 2 23 952 973 951 973 0.96

15 17 0.69 49 4.6 0.5 2 23 1077 1098 1077 1098 0.94

16 17 0.0089 0.63 10.5 0.0 1 23 1108 1130 1108 1130 0.96

17 17 0.00016 0.011 16.0 1.7 1 23 1137 1159 1137 1159 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.4e-06	0.00067	19.9	2.9	1	23	158	180	158	180	0.98
2	17	0.14	10	6.7	7.3	1	23	186	208	186	208	0.97
3	17	1.6e-07	1.1e-05	25.5	3.2	1	23	214	236	214	236	0.99
4	17	1.2e-05	0.00082	19.6	0.4	1	23	242	264	242	264	0.99
5	17	0.011	0.79	10.2	0.2	2	23	348	372	347	372	0.92
6	17	0.0014	0.099	13.0	0.4	2	23	394	416	393	416	0.96
7	17	0.057	4.1	8.0	0.7	1	23	502	524	502	524	0.97
8	17	0.0039	0.28	11.6	0.1	2	23	532	553	531	553	0.92
9	17	8.6e-05	0.0061	16.8	0.4	1	23	561	585	561	585	0.94
10	17	4.6	3.3e+02	2.0	0.9	2	23	621	643	620	643	0.94
11	17	0.0024	0.17	12.3	1.1	1	23	688	711	688	711	0.97
12	17	0.0046	0.33	11.4	1.2	2	23	894	916	893	916	0.96
13	17	0.037	2.6	8.5	0.1	1	23	922	944	922	944	0.92
14	17	0.045	3.2	8.3	0.1	2	23	952	973	951	973	0.96
15	17	0.69	49	4.6	0.5	2	23	1077	1098	1077	1098	0.94
16	17	0.0089	0.63	10.5	0.0	1	23	1108	1130	1108	1130	0.96
17	17	0.00016	0.011	16.0	1.7	1	23	1137	1159	1137	1159	0.98

Sequence Information

Coding Sequence: ATGATGGCCCTAAAGATGTTATATCGCGGTCCCAGTTCGCGTTTGgagaatttaattgaaaagatCCAGGCCACCAAGGAGATAACCCAAAGCGACATGTACAGTACCCACACATCATCCAGTTACTCGCCCAGCATTTCGGATGGCACCATGACACCCAATTCCCACCATTTGCCCGGCGCTCCCACCTCGGCCGCCGCCTCTGGCCAGGAGGATCACCATCATGCCGATGGCAAGCTCAATGGTGGCACCGATGgcgaggagctggccaagccTAAGCGATTGCCGCactttcatcatcatcaccaccatcattaccaccaccagcaggcgCTGAAAATCGCCAACAAGCTGCGCAAAATCAATAAGGAAGCCAAAATGGGAGCCGGCGGTGGTCCTGGGGCCGGAGGAGCAGGCTCCAAGTTTGATAAGTTGACAGGCGAGGGGATCAAGGCCCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGCGATAAGTCATTTCCGCGTCTCGGCTACTTGAAGCATCACGTACAGAGCCACGCCGAACACCTGCCCTTCAAGTGCGAATACTGCTCGAAGCTGTTCAAGCACAAGCGCTCCCGGGATCGCCACAAGAAGCTGCATACCAACGAGCGTAACTACAAGTGTCCCCATTGCGAGGCGGCCTTCTCCAGGAGTGACCACCTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCGTTCCAGTGCAGCATGTGCAACCGAGGCTATAACACGGCGGCTGCCCTGACCTCGCATATGCAAAAGCACAAGAAGAATGCGGCCATCCTGGCAGCCGGGGGTAATCCCAATGCCCTCAACTATAGTCCCCGATCCACGGGTTCGGCCTCGGCCTCGGTCTCGAGCAATGGCAGTCTCCAGAAGAGGCGGTATGCTTTAGCCCTAGCCTCGGATAGTAGTCCCAGCAGGTTGGACTTCCCCAAGAGATCCCGGAGCAGTCATGTGGGTGGTAACGGGGGCGGCACCACAACCACGAcagccacacccacaccctTGCTGAGGTGCAGCTATTGTCCCAAGGTCACGGAGTTTAGCAGCTTGGAGCAGCTGAATGCCCACCTGCAGAGCGTCCACgaacagcagcatcagcatggAGTAAAGACGCCAGTGGCTCCAGAGAGCGAAGGCTTCCAACTGAGCTGCGAATATTGCACCATGAAATTCGGCAATATAGCCGGACTATTCCAGCACATGAGGAGCACTCACCTGGACAGATTGAGCAGTCCGAACTCCTACTACGAGCACTTCAATCGCCTGGCCACCGCCGGTACTTTCAGTCCCCGTCTGGCCCTGGACTTGCCCAAAATCAAGCCGGATCTGGGCAGCCCGGAGAGGGAGACCACGCGTGCCGCCGAGGAGGATCTGCCCACCGATTTGAGCAGCAACAAGAGGCGATCCCAGACTCCCACAAATAACCAGCAATTGCAGTCCCAACAGCTGGCCCCACCGGCTGCTCCGGTGTTCTTCTGCAATCAGTGCAACGCCGGGCTGCCGGATTTCGAGAGCTTCAGGAATCACCTAAAGAGCCACATTGCCGAGGGCATGCAAATGGTGTGTCCCCACTGCGGCTTGAGTCTGCCGGAGCAATCGGAGTTCGAGCGCCATGTGGTGGGACACTTCCTCATCGCCGGCTCCGAGTTCAactgcagctccagctgcgGCAAGAGCTTCGCCAAGTCGGAGGacctgcagcagcatctgctCTCCGAGCATGTACTCACCCTGCTGAAGTGCTCGCTGTGCTCGGAGCTCTGCGAGAGCCGGATGGCCATGCAGCTGCATCTGGCCTGTGCCCACAGCCAGGAGACGAAGCTCCTGCGCTGCAGCGCCTGCCTGGAGCTCTTCCGCTCCGATGCCGAGTTCCATGTGCATGTGAAGACGCGTCACCAACTCGGAGGACATCCCTCGCTGGGCGCCACACCCAGTGCTCCTGCCAATCCCCTGCAGTGCATGTTCTGTCGGGCTGTGTGCTCCTCGGAGCTGGAGATGCACTTCCATTTGGCGGCCCACGCAAGGCAGTTTAGGTGCCCCTCCTGCCCGGAGACCTTCCATGTGGAGTTCCTGCTGGATAGGCACATGCAGAGCCAgcatggcggcggcggcggcaaggagaaggagcagcaacgTGGCTCACCCAACATGGGCAGCCTCTATGTGAATGCCTTGCTGCCTCCcttggcagcagcggcggcggcagcagctgccaccaataacaacagcagcatcattGACTACAATGTGGCTTTCAAGGGTTTGtttggaggagcaggagcaggaggaggaggaggaggagGAGGAGGCTCTGGCGCGGCCCCACCCTCGAGCAACAAGTTCTACAGTCCCCTGCAGGTGGACACCAATGCCTTGAAGGCTCAAACCTCACCGCATCCCGCTCTCATGTACGGCCTCAGTCAGCGCTATCTGATGGAGATGTATGCCGCCAAGTCCACCTCGCCCTCCAACGAGGGCAATCCACAGCCACCGCAGGCCACTGCTCCGCCAAGTGCTCCACCTAGTGCCGCTCCAACCGCTGTCACCTTCAGTTGCGGAATGTGCGAGCGCCAGGATCTGCGCAGCGAGGCGGAGCTCCACTCGCACCGGAAGCTGGCCCACAACCTCAAGACGGGCGTGAGCCTGAGGTGTGCCTACTGTGCCGGGAACTTCAAGTCGCGGGCAGAGCTGGAGCAGCACATGAAGAGCTGCCACAATTCCACGGGCAAGCACAAGTGCCTGATCTGCGATGAGGTCTTTCCCTCGCCGGCCATCCTGGCCGAGCACAAGCTGCAGCACTCGAAGGTGGGCCAGTCTGGGAAGTGCTCCCACTGCGGCCAGCCGCTGGAGGATGTGGCCGCCTTCAGGGCTCACCTCTCGGAGCATGGCAGCGATGGAGCCACCCTGCCGCTGGCCTGCATCTGCTGCCGCCAGACCCTGCACTCGGAGTTCGAGCTGAGTCTGCATGCCAAGTTCCACACCAAGTCGGCCTCCAGCGGGGGTAGCCTCCAGGAGCCGGTGTGTGCCCTGTGCCTGGAGCCACTGCCCGATGTGCCGCTGGAGGGGCCAGCCAAGCTGTGCGAGAAATGCTGTCGGAAGCATAACCTAAATGGAAAGCGGGGCAAGCCAAGTGACCAGCCGTTGCAGGCTCCCGCCTCAGTGGGAGCAGGATCTGGATCTGCCTTTGTGGAGAACCGCTGCAACCTGTGCAAGATGATCCTGCCGCATGCTCAGAAGCTGCAGGAGCACCTGGTGGAGCACACCTTTGCGGGCACCGAGCAGCGCGGCTTCAACTGTTACATCTGCTCGGCGGTATTCACGGCACCGGGAGGCTTGCTCAATCACATGGCAGAGCACGGAGCCCATTCGCGTCCCTACGACTGCAGCCTGTGCCCGGAGAAGTTCTACTTCCGGGCGGAGCTGGAGCACCATCAGCGGAGTCACGAGCTGCGGCCGCAGGCAGCCAGGCCACCCATGCCCAAGGTGGAGGCACCCGCCATTAGGAATAGTTCGCCCATCTGCGAGAGTCCTCCCTCCGGGAGTCGCAGTCCCACAATTAATGTCAAGCAGGAACTCTACGAGACGGACACGGTGGAGTCGGGAGCTGGTGAAGATGAGCCAGAGGAGAATCCTCAGGAAGATGAGGAGTACATTGAAGTGGAGCAAGTGCCGCATGAGACGCGAACCAATGAGATGGGTTCGCAAATGGAAAGGTCCACCAGCAGCGCCTAA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITQSDMYSTHTSSSYSPSISDGTMTPNSHHLPGAPTSAAASGQEDHHHADGKLNGGTDGEELAKPKRLPHFHHHHHHHYHHQQALKIANKLRKINKEAKMGAGGGPGAGGAGSKFDKLTGEGIKARGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCSKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASVSSNGSLQKRRYALALASDSSPSRLDFPKRSRSSHVGGNGGGTTTTTATPTPLLRCSYCPKVTEFSSLEQLNAHLQSVHEQQHQHGVKTPVAPESEGFQLSCEYCTMKFGNIAGLFQHMRSTHLDRLSSPNSYYEHFNRLATAGTFSPRLALDLPKIKPDLGSPERETTRAAEEDLPTDLSSNKRRSQTPTNNQQLQSQQLAPPAAPVFFCNQCNAGLPDFESFRNHLKSHIAEGMQMVCPHCGLSLPEQSEFERHVVGHFLIAGSEFNCSSSCGKSFAKSEDLQQHLLSEHVLTLLKCSLCSELCESRMAMQLHLACAHSQETKLLRCSACLELFRSDAEFHVHVKTRHQLGGHPSLGATPSAPANPLQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGGGGKEKEQQRGSPNMGSLYVNALLPPLAAAAAAAAATNNNSSIIDYNVAFKGLFGGAGAGGGGGGGGGSGAAPPSSNKFYSPLQVDTNALKAQTSPHPALMYGLSQRYLMEMYAAKSTSPSNEGNPQPPQATAPPSAPPSAAPTAVTFSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGQPLEDVAAFRAHLSEHGSDGATLPLACICCRQTLHSEFELSLHAKFHTKSASSGGSLQEPVCALCLEPLPDVPLEGPAKLCEKCCRKHNLNGKRGKPSDQPLQAPASVGAGSGSAFVENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGGLLNHMAEHGAHSRPYDCSLCPEKFYFRAELEHHQRSHELRPQAARPPMPKVEAPAIRNSSPICESPPSGSRSPTINVKQELYETDTVESGAGEDEPEENPQEDEEYIEVEQVPHETRTNEMGSQMERSTSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548267;
90% Identity: iTF_00488807;
80% Identity: -