Dbun008425.1
Basic Information
- Insect
- Drosophila bunnanda
- Gene Symbol
- retn
- Assembly
- GCA_008042815.1
- Location
- VNKE01005499.1:2641-10302[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-26 5.2e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 1.9 5.2e+03 -2.2 0.4 13 13 268 268 239 311 0.57
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGGCACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAACTGTACAACCTGGTGATAGCCCGCGGCGGCCTGGTGGACGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGCAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCTCTCCCGGGTGGCATGCAACAAATGTCCCCTCTGGCCCTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCCcaggccgctgctgccgccgctgctgcccaTCACCGACTGATGGGAGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGCATGATGGAGTACTTGCAGTTGATTCAGGCCAAGAAGGAGCAGGCCATGCCGCCGGGCCTGGGTGCCAGCCTGCcccatcagcagcatcagcagcagcagcagcagcagcagcaacagcagcaacaccagcagcaacagtcgcagtcacagtcgcagcagcagcaacatcacctgcagcagcagcagcagcgacagcgcTCGCAGAGTCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCTCTGTGGCACATGTATCATAACAACAACAGTCCACCGGGATCCGCACACACCTCCCCCCAGCAACGCGAAGCTCTGAACCTCTCCGACTCACCGCCGAATCTCACAAACATCAAAAGGGAACGCGAGCGGGAGCCGACGCCGGAGCCCGTGGAGCAGGACGACCTCTCCACCGGCCACCAGCCGCCGCCGGCCAAGCGCATGGGCAGCGGCCTCCTGCCGCCCGGCTTCCCGGCCAACTTCTACCTGAATCCCCACAACATGGCCGCAGTGGCTGCCGCGGCTGGCTTCCACcaccagcaggcagcagcggtggcggccggtcatcatcatcatcaacagcagcatcagcagcatcagcaggatGCCGCCTCCGAGGGCGAGCCGGAGGATGAGTACGGCCACGGGGAGCACAACACCACGGGGAACTCCTCCTCGCTGCACGACGACAGCGAGACGGCGCAGCCGATGaatggccaccaccaccaccaccaccatcatcatcaccaccagaGCCATCAGCTGGACAAGTCGGATGATTCGGCCATCGAGAACTCGCCCAGCACATCCACCACCACCGCTTCGGTGGGCCATCGCCACAGCTCGCCAGTGTCCACCAAGAAGAAGGGCGGCTGTGGATCCAAGCCACTGGACAAGGATCTGGCTAGTGGGGACAAGAGCTTGGCCAGTGGCAAGCTGAATCCCCTGGAAACGCTGAGCCTGCTCTCCGGCATGCAGTTCCAGGTGGCCAGGAATGGCACCGGCGAGAATGGTGAACAGCAGCTAATGGTCAATCTGGAGCTGAATGGCGTCAAGTACTCGGGCGTGCTGGTGGCCAATATGGCCCACGCCAGCCAGAGCGTGACAAGGACCAGCTCGCCCTGCCACGAGGCTGAAGCTCGCCACaaccaggaggagcaggaggaggaggaggaggagcacgaTGATGGGGAAGTGGAGGAGCAGAGGAAggccgccgaggaggaggacgaagcCCATCGATCGCCCATCAAGCAGGAGGCAGAGAACGAGCACGATGACGATGACCAGGATATGGAGTCCgcagcggcggctgccatTGTGAATGGGGGAGCAGGTGGAGGCAACAACTCGGCAGTGGGCGGTGCTGGCGTGGCAATGCCCCTGCTCAAGGACGCGGTGGTCAGCTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQQQQQQQQQQQQHQQQQSQSQSQQQQHHLQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDLSTGHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAVAAGHHHHQQQHQQHQQDAASEGEPEDEYGHGEHNTTGNSSSLHDDSETAQPMNGHHHHHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKGGCGSKPLDKDLASGDKSLASGKLNPLETLSLLSGMQFQVARNGTGENGEQQLMVNLELNGVKYSGVLVANMAHASQSVTRTSSPCHEAEARHNQEEQEEEEEEHDDGEVEEQRKAAEEEDEAHRSPIKQEAENEHDDDDQDMESAAAAAIVNGGAGGGNNSAVGGAGVAMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561533;
- 90% Identity
- iTF_00484918;
- 80% Identity
- -