Dbak022933.1
Basic Information
- Insect
- Drosophila bakoue
- Gene Symbol
- retn
- Assembly
- GCA_008044335.1
- Location
- VNJL01010307.1:15901-23333[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-26 8.7e-23 81.2 0.0 2 89 20 105 19 105 0.96 2 2 1.5 6.9e+03 -1.9 0.7 9 9 270 270 237 317 0.58
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGGCACCCCGATCAATCGGCTGCCGATCATGGCCAAGTCTGTGCTGGATCTGTACGAACTGTACAATCTGGTGATAGCCCGCGGCGGTCTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGCAATCGGCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCGCTCCCTGGTGGCATGCAACAAATGTCCCCTCTGGCTCTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCGcaggctgctgccgccgccgccgctgcccatCACCGACTGATGGGAGCCCCGGCCTTTGGCCAGATGCCCAACCTGGTCAAACAGGAGATCGAAAGCCGCATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAAGCCATGCCGCCGGGCCTAGGTGCCAGCCTGCcccatcagcagcatcagctgcagcaggcgcagcagcagcaacagcaacaccagcagcagcagtcacagtcgcagcagcaacagcagcagcagcagcaacatcacctgcagcagcagcaacagcagcagcgtcagCGCTCCCAGAGTCCCGAACTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCTCTGTGGCACATGtatcacaacaacaacagtccGCCGGGATCCGCACACACCTCCCCCCAGCAACGCGAGGCTCTGAACCTCTCCGACTCGCCGCCAAACATCACAAACATCAAAAGGGAACGCGAGCGGGAGCCGACGCCCGAGCCCGTGGAGCAGGACGACCTGTCCAACGTCCACCAGCCGCCGCCGGCCAAGCGCATGGGCAGCGGTCTCCTGCCACCCGGCTTCCCCGCCAACTTCTACCTGAATCCCCACAATATGGCCGctgtggcagcggcggcgggctTCCACCAGGCGGCCGCCggtcatcagcatcatcatcatcagcagcaagACGCCGCCTCCGATGGCGAGCCGGAGGACGAGTACGGCCATGGGGAGCACAACACCACGGGTAACTCGTCCTCGCTGCACGATGACAGCGAGACAGCGCAGCCGATGAATGGCCATggacaccaccaccatcatcatcaccagaGCCATCAGCTGGACAAGTCGGACGATTCGGCCATTGAGAACTCGCCCAGCAcatccaccaccaccgcctcgGTGGGTCATCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAGGGCGGCGGCTGTGGGTCGAAGTCCCAGGATAAGGATCTAGCTGGTGGGGATAAGAGCGTGGGCAGTGGCAAGCTGAATCCTTTGGAAACGCTGAGCCTGCTCTCCGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCGGCGAGAATGGCGAACAGCAGCTAATGGTCAATCTGGAGCTGAACGGCGTCAAGTACTCGGGTGTTCTGGTGGCCAATGTGGCCCACTCCAGCCAGAGCGTGACCAGGACCAGTTCACCCCCCTGCCACGAGGCTGAAGTCCCCCTaaaccaggaggaggaggagcaggagcacgacgatgaggaagaggaggagcaaAGGAAGGCCGCtgacgaggaggacgaggccCATCGATCGCCCATAAAGCAGCAGGCAGAGAGCGAGCATAACGAGGACCAGGACATGGAGAccacagcggcggcggcggcggccatggTGAATGGAGGGGGAGGTGGAGGCAACAGCTCGGCAGTGGGTGGTGCTGGCGTGGCAATGCCCCTGCTCAAGGACGCGGTGGTCAGCTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQAMPPGLGASLPHQQHQLQQAQQQQQQHQQQQSQSQQQQQQQQQHHLQQQQQQQRQRSQSPELSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNITNIKREREREPTPEPVEQDDLSNVHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHQAAAGHQHHHHQQQDAASDGEPEDEYGHGEHNTTGNSSSLHDDSETAQPMNGHGHHHHHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKGGGCGSKSQDKDLAGGDKSVGSGKLNPLETLSLLSGMQFQVARNGTGENGEQQLMVNLELNGVKYSGVLVANVAHSSQSVTRTSSPPCHEAEVPLNQEEEEQEHDDEEEEEQRKAADEEDEAHRSPIKQQAESEHNEDQDMETTAAAAAAMVNGGGGGGNSSAVGGAGVAMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561533;
- 90% Identity
- iTF_00561533; iTF_00491296;
- 80% Identity
- -