Dbak024546.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bakoue
Gene Symbol
RREB1
Assembly
GCA_008044335.1
Location
VNJL01002967.1:25563-31580[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.032 3.9 8.7 0.8 1 21 231 251 231 253 0.93
2 13 0.0003 0.036 15.1 0.2 1 23 263 285 263 285 0.98
3 13 7.3e-05 0.0088 17.1 7.3 1 23 291 313 291 313 0.98
4 13 1.9 2.3e+02 3.2 3.7 2 19 546 563 546 565 0.97
5 13 0.008 0.96 10.7 0.1 1 23 712 734 712 734 0.97
6 13 1.1e-05 0.0013 19.6 0.7 1 23 744 766 744 766 0.99
7 13 0.00075 0.09 13.9 2.0 1 23 772 795 772 795 0.97
8 13 0.0027 0.32 12.2 2.0 1 23 1075 1098 1075 1098 0.95
9 13 7.8e-05 0.0094 17.0 0.3 2 23 1490 1511 1489 1511 0.97
10 13 0.13 16 6.8 6.3 1 23 1517 1540 1517 1540 0.97
11 13 8.3 1e+03 1.2 3.6 1 23 1673 1696 1673 1696 0.87
12 13 0.0076 0.91 10.7 0.5 3 23 1756 1776 1754 1776 0.96
13 13 0.0013 0.15 13.2 4.8 1 23 1782 1804 1782 1804 0.99

Sequence Information

Coding Sequence
atgaTGAACAGCAACAATACAGACTTGGGGGAGATGGAGCGTAAGCGAAGAGAGTCCACAACATCAGAATCCTCTCTCGAGCATCTCGACCTGGGACGAACGCCAAAGAAGctcagcggcagcggcggtgcTGCGCAGTCGACATCGACGCCGCACGAAGTGGCAGCGACGTCGCGCAAGCGCAAGCTgcgccagctgcagcagcaccaccaccagcagagTCGTTCGGATCTCCTTAGcgatgaggacgaggacgaggaggatgcACGTCCCCCAAATCGGCACAAACAGCGACGAGGCGCCCAGGgttcctcctccgcctccgcctccgcctccattGTGGTGGACTACTCCGCCGGTGATGCCAGTTCGCTGCGGAAGAAGTTTCGTCTCAATCGCTCGGCGGCGGCCAGTCTCTCCGAATCGGGATTCGTGGATGCCAGCAGCACTGCCCACAGTGGCTACCTGGGcaacaatagcagcagcagcgccggcACAAGCCTGGCAGTGCCTTCAGTGGCAACAAGCGCTGGTGCCGCCGGTGGAGCTGCTCCCaacgcctccgcctccgcctcgagtagcagcaacagcacgagcagcagccacagcagttCCGGTGGCTCCTCGCCGCAGGGCCTGTGCCTGTCCAGCGGCGAGTCGGGCATTGGGGCCGGCGATGAGCACATGAAATACCTGTGCCCCATCTGCGAGGTGGTATCCGCCACGCCGCACGAGTTCACCAATCACATTCGCTGCCACAACTATGCCAACGGGGATACGGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGTTATCTTCGGCCTCATCCCTGGACAGGCACGTGCTGGTTCATACGGGCGAGCGGCCGTTCAACTGTCGCTACTGCCACCTGACCTTCACCACCAATGGCAATATGCATCGCCACATGCGCACTCACAAGCAGCACCAGACAgctcagtcccagtcccagtcgcagtcgcagtcgcagtcccagTCTCAAGCCCAAACCCAGCTGCAGCgccgtcagcagcagcaccagcagcagcagcagcagactcatcccgcccagcagcagcagcagcagtcacacCAGCAGACGCTGGCCAGCTCCATGCCAGTGCGGGCGGAGAGCTATGAAAGCGATGCCAGCTGCTCCACGGATGTGTCAAGCGGTAAtagtcgcagtcgcagcagtAGCTTCctccacaacaacaacaacaataactccCACAAGGctaccaacaacaacaacaacagaagcaACACCAAGCAGGAGTTGGAGGGATtggaggagcaggaccaggagctggaggagaacAAGCAGCTGCTACAGCGTCGCCTGAAGACGACCATTAACAACAATGTGATCGAGAACCatggggaggaggaggatctgCGCAACGAGGAAATGGATGATGCAGATGCCGATGTGGCCATGCTCACAAGCACTCCGGATGTGGCCACACTGCTGGCAGGAGCCAGTGCCTCCGGTGCTGCCTCGCGttcgccctcgccctcgccaCCGGGCTCGCCCGGCTTGCTACTGAGCTGCCCCGCCTGCGGAGCCTCCGATTTTGACAACCTACCCGCTTTGTGCGCCCATCTGGATGCCCGGCATTCGGATATACCGGCCAAGTGCCGCGACTGTGAGGTGATCTTTGCCAGCCATCGCCAGCTGCAGGCGCACTGCTGCAGGGGAGGATCTGCGCTGGGAGCGGGACTGCCGCCCATGCTGGGCGCCAGCAGTTCGCCGCTGCATGCCGACGAGGAtgccgaggacgaggaggaggcggatcATGAGGATGATGAGGAGCTGATGGAGCAAAAGCGCGATGACTTCTTCCACAAGCTGTATCTCAAGGGTACCGCGGGTGGAGCGGGTGCAGCGGGCAATATCTCCCATCCGCCATCGCCCATCAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGATATACAGAGCATCCTGAACATgaccagctccagctgcaccAGCAGCTTCCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAATATAGCCTGGATGGGCGcgatcaggaggaggaggcccagGATGCCTTCACCTCGGAATTCCGGCGGATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTCTGCTCGGCTGTCTTTCCGAATCTGCGCGCCCTCAAGGGTCACAATCGGGTGCATCTCGGTGCGGTCGGGCCCGCCGGACCCTTCCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCGGCCCTCGTGCGGCACATGCGCACCCACAACGGCGACCGTCCGTACGAGTGCGCCGTCTGCAACTATGCCTTCACCACCAAGGCCAACTGTGAGCGCCACCTGAGGAATCGGCACGGCAAGACCAGTCGCGAGGAGGTGAAGCGTGCCATTGTCTACCATCCCGCCGAGGATGCCGGCTGCGAGGACAGCAAGTCGCGGCTGGGTGAGGATCTGGCCGATATGAGTTTCCGCTCGATAAGTCCcacgccgccgcctccgccaccgccgccagcgGTGGgtgagagcagcagcagcagctcccagCTGAAGCACATGCTCCTGggcgagcagcagcatcatcattcccattcccatcaccatcaccatccgGTGGCCCCAGCCCAGCCACCGTTAAAGATTCAGGTGAAGAGCCTGGATCAGCTGGTGGACAAGAAACCAGCGGCAGTTCAGCAGCCGGAGaagagctcctcctcctctgcttTGGACTTTAGCATGGATGTGTTGGATCTCAGCAAGAAGCCAACGGGGGCAGCCatcacacccacacacacgcccTCGCTCACGCCGGCGCCAGCCCTCGTCGGTGCGTCCGCTGTGGTTGCTCCGGCTGCCGATCTGGCCGCTGCTTTGGAACAACAGCAATTGCTtctggcgcagcagcagctgtttgCCGGCGCCGGTGACGCTGCCTCCCAGTACATGCAACAGCTGTTCCGCAGCCTGATGTTCCAGTCGCAGACGCCGGGCTTCTCCTTCTTCCCCTTCATGGCCCCACCGCCGCCGGAGGTCAACCAAGAGAAGCCGCCACTGGTGAGTCCACCGTCGCGTATGAACCCACTGCCCGTGGGCGTGGGTGTGCCCGTGCCGCCCGGCGGACCCGTCAAAATGGTCATCAAGAATGGCGTGCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAACGTCCCTTCGCCTGCGAGCATTGCTCCGCCCGGTTCACGCTGCGCTCCAACATGGAGCGACATgtgaagcagcagcatccgcagTTCTATGCCCAGCGACAGCGCAGTGGTCACCATGTTATGCGGGGCAGGGGCGCATCGaatgccgccgctgccgctgccgctgctgctgccgctgcagcggctgcCATGGGTCCAACGGGGGGATCCGCcgcccatcatcatcacagccacagccacaaccacggacatggacatgggcaTGCTCCCATCTCCGAGCAGGTGAAGTACGCCATTTTGGCGCAGCAGTTGAAGGCGCACAAGAACACCGATCTCCTGCAGCAGGCCTTGGCCCATGGCTCCAGCAGTGTGGCCGGGAATCCGCTCCTGCACTTCGGCTATCCGCTGGGCCCCGCACCCAGGGTTCCGCATGTGAGCAGCCAGGGAAACGGCCAGACGCCCATGGTCATGGACGATGATGAGCCCAAGCTGATCATCGATGAGGATGAGAATGAGCACGACCACGAAGTGGAGCCGGAGGATGTGGATGACtacgaggatgaggaggatgaggaggaggacgagccCGAAGATGAGCCGGAGGTGATTCTAGACGAACAGCATGTGGTCGTGGAAAAGGAGGAAGctccggaggaggaggaggaggaagaggagcaggagctacCCAAGCCCCTGGAGCAGCTTGGCGCCATGTCCAAGTCCAGCCCCACTCAAAATGAGGCTGCCCACAAGATGGCCGAGACCATCCTGGAGCAGGCCATCAAGGCTGGCATCAAGCAGCCTTCAtctgcaacaacaactacggtGTCCGCAGCGGCGTCATCCTCCTCCATCCAAGAGGAGAGTCCTCCGGCCTCAGCTGCAACCCCACCGGCTGCCATGCAGGAGCCCAGCAGCAATCCCAGCAGCCTGAAGACCATGATAGCCCAGGCCGAGTCTGTGGGCAAGTCGCTGAAGGAGGTGGCCAGTTCGCCGTTCAAGGACGAGTCCCAGGACCTGGTGCCGGTGGCCAAGCTGGTGGACAATGCCACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGGCCCAGCGACGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGTGCCAGCGagagcaacaacagcggcacaGAGGATGTCACCAGCTCGAGCTCCAGCAGCGAGCCGAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAATCGCGTCTCCTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGCCACATTCTCACCCACACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTGTTCACCACGAAGAGCAACTGCGACCGCCATCTACTGCGCAAGCATGGCAACGTCGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGACGTTAGCGAGCCGATACCGGTGCCCAAGTCCGTGGAGGAGatcgagctggaggagcagcgtCGCCGCCAGGAGGCGGAGCGCGAAAGGGAGCGCGAACTGGAGCGGGAGCGTGAGCTGGAGCGCGAGCGTGAGCTGGAACGGGAGCGTGAGCTGGAGAATGAGAAGGAGCGGGAACGCCAGCAGCTTATCCATAAGCTGGCCGCCCAGATGAGTGCcgctgcggcagctgctgcagcggcggctgctgcctcATGTGCCTCGCCAGGCAATGGTTCCTCTGCCGGGGTTggagttgcagctgcagctggagccgGACCGGGAGGTGATCTTTCCGCCGGCGGTGATCTGCCCTACAAGTGCCACCTGTGCGAGGGCTCGTTTTCCGAGCGTTTGCAATGCCTGGAGCATATCAAGCAGACGCATGCCCACGAGTTCGCCCTGCTCCTGGCCAAGGGGGCCATCGAGAATGAGTCGCTGCACTCCAACGACTCATCgaatccccagcagcagcagccacaacaacaccagcaCTCGGACGATGAGGCCACCAATGGCTTGGGCCGTGGTAAATATCCGGATTATAGCAACCGTAAGGTCATCTGCGCCTTTTGTGTCCGCCGCTTCTGGTCCACCGAGGATCTGCGGCGTCACATGCGCACCCATTCCGGCGAGCGGCCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGCCACATGAAGAAGCACAGTGGACGGGCCCACAATGGGGATACGCCCGGCTCCGATTGCTCCGACGATGAGCAGGCAATGAGCAGCAGTCCGCCGGGCACGCCGGCTCCCTCTCCCATGCCGCTGCCCTCCAGCgccagcaacaccaacaacaacagctgtcagaataataacaacaacaataataataataataacaacaataataataacaataataacaacaacaagctcGGCCTGAAGCTACCCAAACTgcacgagctgctggacaagGCGAATGAGTGGCGAGCGAGTCGGCTGGGCGAGCACAAGGAGAACCTGGGCGAGGCAACGCCCTCGGGAGCAGCGGCCGCCGGTTCGGATCTGATTGGTAACCTGCTGGGTATCAGCGATCAGGGCATACTCAACAAGCTGCTGTCCTCCGCCGACGAGGCGGCCAAGCTTCTGGGCGTGGACAACAAGTGA
Protein Sequence
MMNSNNTDLGEMERKRRESTTSESSLEHLDLGRTPKKLSGSGGAAQSTSTPHEVAATSRKRKLRQLQQHHHQQSRSDLLSDEDEDEEDARPPNRHKQRRGAQGSSSASASASIVVDYSAGDASSLRKKFRLNRSAAASLSESGFVDASSTAHSGYLGNNSSSSAGTSLAVPSVATSAGAAGGAAPNASASASSSSNSTSSSHSSSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTAQSQSQSQSQSQSQSQAQTQLQRRQQQHQQQQQQTHPAQQQQQQSHQQTLASSMPVRAESYESDASCSTDVSSGNSRSRSSSFLHNNNNNNSHKATNNNNNRSNTKQELEGLEEQDQELEENKQLLQRRLKTTINNNVIENHGEEEDLRNEEMDDADADVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGLLLSCPACGASDFDNLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGGSALGAGLPPMLGASSSPLHADEDAEDEEEADHEDDEELMEQKRDDFFHKLYLKGTAGGAGAAGNISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADMSFRSISPTPPPPPPPPAVGESSSSSSQLKHMLLGEQQHHHSHSHHHHHPVAPAQPPLKIQVKSLDQLVDKKPAAVQQPEKSSSSSALDFSMDVLDLSKKPTGAAITPTHTPSLTPAPALVGASAVVAPAADLAAALEQQQLLLAQQQLFAGAGDAASQYMQQLFRSLMFQSQTPGFSFFPFMAPPPPEVNQEKPPLVSPPSRMNPLPVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAAMGPTGGSAAHHHHSHSHNHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPRVPHVSSQGNGQTPMVMDDDEPKLIIDEDENEHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDEQHVVVEKEEAPEEEEEEEEQELPKPLEQLGAMSKSSPTQNEAAHKMAETILEQAIKAGIKQPSSATTTTVSAAASSSSIQEESPPASAATPPAAMQEPSSNPSSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELENEKERERQQLIHKLAAQMSAAAAAAAAAAAASCASPGNGSSAGVGVAAAAGAGPGGDLSAGGDLPYKCHLCEGSFSERLQCLEHIKQTHAHEFALLLAKGAIENESLHSNDSSNPQQQQPQQHQHSDDEATNGLGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMSSSPPGTPAPSPMPLPSSASNTNNNSCQNNNNNNNNNNNNNNNNNNNNNKLGLKLPKLHELLDKANEWRASRLGEHKENLGEATPSGAAAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491706;
90% Identity
iTF_00561943;
80% Identity
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