Basic Information

Insect: Drosophila bakoue
Gene Symbol: -
Assembly: GCA_008044335.1
Location: VNJL01010950.1:11513-14735[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5e-06 0.00017 22.4 3.1 1 23 204 227 204 227 0.95

2 17 3.5e-05 0.0042 18.1 0.2 1 23 234 256 234 256 0.97

3 17 0.2 24 6.3 0.1 2 23 288 309 287 309 0.94

4 17 4.8e-05 0.0058 17.6 2.3 1 23 400 423 400 423 0.97

5 17 0.23 28 6.1 0.6 1 19 430 448 430 451 0.93

6 17 0.063 7.6 7.8 6.4 1 23 460 482 460 482 0.95

7 17 2.3e-05 0.0028 18.6 0.3 2 23 485 507 484 507 0.95

8 17 0.00037 0.044 14.9 2.4 2 23 515 536 514 536 0.96

9 17 0.024 2.9 9.1 0.2 2 21 563 582 562 583 0.94

10 17 0.0075 0.9 10.7 2.6 1 23 632 655 632 655 0.98

11 17 0.016 1.9 9.7 0.4 1 23 692 715 692 715 0.96

12 17 0.00012 0.014 16.4 1.6 2 23 749 771 748 771 0.95

13 17 0.02 2.4 9.4 0.1 1 23 785 807 785 807 0.95

14 17 1.7e-05 0.002 19.1 1.0 1 23 813 835 813 835 0.99

15 17 3.1e-07 3.7e-05 24.6 2.6 1 23 841 863 841 863 0.98

16 17 3.4e-05 0.0041 18.1 3.8 1 23 869 891 869 891 0.97

17 17 2.4e-05 0.0029 18.6 0.5 1 22 897 918 897 921 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5e-06	0.00017	22.4	3.1	1	23	204	227	204	227	0.95
2	17	3.5e-05	0.0042	18.1	0.2	1	23	234	256	234	256	0.97
3	17	0.2	24	6.3	0.1	2	23	288	309	287	309	0.94
4	17	4.8e-05	0.0058	17.6	2.3	1	23	400	423	400	423	0.97
5	17	0.23	28	6.1	0.6	1	19	430	448	430	451	0.93
6	17	0.063	7.6	7.8	6.4	1	23	460	482	460	482	0.95
7	17	2.3e-05	0.0028	18.6	0.3	2	23	485	507	484	507	0.95
8	17	0.00037	0.044	14.9	2.4	2	23	515	536	514	536	0.96
9	17	0.024	2.9	9.1	0.2	2	21	563	582	562	583	0.94
10	17	0.0075	0.9	10.7	2.6	1	23	632	655	632	655	0.98
11	17	0.016	1.9	9.7	0.4	1	23	692	715	692	715	0.96
12	17	0.00012	0.014	16.4	1.6	2	23	749	771	748	771	0.95
13	17	0.02	2.4	9.4	0.1	1	23	785	807	785	807	0.95
14	17	1.7e-05	0.002	19.1	1.0	1	23	813	835	813	835	0.99
15	17	3.1e-07	3.7e-05	24.6	2.6	1	23	841	863	841	863	0.98
16	17	3.4e-05	0.0041	18.1	3.8	1	23	869	891	869	891	0.97
17	17	2.4e-05	0.0029	18.6	0.5	1	22	897	918	897	921	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTGATGTGTCGAACCTGCGACTCCACGGACACCGACAATCTTCTAAAGCTGGCCACGCCCTCGAAAAAGTACCCGGAGAAGCTGCTCTCGGAGATTTTGACGGAGCTAACCGATATCCATGTTAACGCGAGTGGCACTCAAAAGCTGCCGCAGTGCTTGTGTAGCAGCTGCACCAAGAAACTGATGGGTGCATATTGTTTCGTGAAGCAGGCGCTGGTCGCCAACGAACTGTTGATGGGGCACTTGAAGAACGGCTCTGCACCGTCCGCCACCGACTGCCTACAGGAGGCGCCCATGGAGCTGTGCGCCGAGCAGCATGTGGAGGTCAAGCTGGAGACGGAGGACGAGGAGTGTGGCGGCAACGATGTTAGTATCACCTGCTCCGACCTGCCAGAATCGGGCGAACGGGACGTGGAGAGCAAAAAGTCCGTGGATCCACTGACCATGATTGAGACGgtgaaactggagggggaaCTGCCAAACTTGGAGAGGCCGGTGGAAGAAGAGCCTACCTCGGATTTTGATGATGAAGGCTCCCTGGATAACCTGCCCCTGAATAAGCGCATCGAAAAGTGGAAGGCTAGAAGAATGCCCGTTTTCAAGTGCCACGAGTGCCCAAGGAGTTTCAAGAGAAACGAGTACCTAAAGCGTCACGAAATCCGTGTCCATCAGCCGGAGACCCACTGGTTCGCCTGCTCCCTCTGCGTTCGCAAGTTCAGCCGCAGCGAAGCCCTCGAGGCTCACCTCAAGGTGCACACGAGGTCCAAGCGGTCGGCCAACATCAGCGAGCACAAGAAGGCCAAGGCGGTGGATCTGAATCTGTGCAAGCCGCACGGCTACAAGCTCATTGAGTGCATGATCTGCCAGAGCCAGTACAACAAGATTGCGGATCTGCGGAGGCACTTGGAAGAGCATCCGGATATAGTCAGCCTGGGCGTTCGTCCTAATGTGCAGCCCCATGAGCTGGCGGAACTCTTTTATCCCGACGCCAAGGACATGGATGAAGAGCAGTTGATCGGTTTAATCCGCAAGGATCTGGCATCGGGCATCTATCAACGTTTCTACTCGATAACCAACCAGAGTGGGTACGAAATGGATCTGGACAGCTCGGAGACGGACAGCGATGCGGACGGTGAACCAGAGGATCAGCAGAACAAGAGGCGGCGCAAGAACCGCAGGGGTAGCTACACCTGCGAACTGTGCCAGCAGAAGTTTCCGCGGAAATACCAGCTATATGATCATCAACGGCAGAGCCACAGCTGGTCCGAGGCTCCGCATGTCTGCGGACGGTGTGATGGACGCTTTGTCAGCCTGCAACTGCTGCGGCATCACAACGAGTCGCAGTGCCGAAATGCACAGAAGCGTTTCCTCTGCCACAAATGCCCGCTGCGCTTCCGGTGGAAACACAATCTAAAGACCCATTTCCGCGAGCATAGGATTACATGCCCCGAGTGCAAGCGGGTCTTTGACAAAAAGAAGTCCCTCACCGTTCACCTGCTCAGCGTCCATGCCGAGGAATCAAAGCTCATACCCTGCCAGTGGTGTAGTCGCAAGTTCTACCGGCATGACTACCTGGTGAAGCATCTGAAGCGCCATGGCCTCAGGGAGCAGGACATTCCACTGGCCGAGACCTTGATAGCGGCCACTTCGAGGCCAAATGGAACGAAGAGAATCACCTGCCGGATGTGCAATCTACACTTTGATCGGATTATGGATCTGCGGGCGCACAtccagctggagctgaagctgtcATTGTCGCTCCACCAGAGCTACGACTCGCCGCACAATTATTCGATCACTAACGAGTCCGGCTtcgagctgcagctggaggatTCGGAGACGGAGGACGAGATGCAGTCGAGCAGCGGCGGTCGTCACGTTTACATCTGCGAGCTGTGCAGTGTGCAGTGCAAGCGGAAGTTCGAAATGATCCAGCATCAGAGGACAATGCATCGATTCGACAAAATGCCGCATGAATGCGACGACTGTATCTTCAAGTGTGTGTCCAAGAGCATCATGGATCATCATCGACTGGGgcagtgcagcagcaaggaGAAGATGTACACGTGCGGCAAGTGCTCCTACAAGTTCATGTGGCCCGAGAATCTGGAGCAGCACGCGCGCCTGCAGCACAGCGAATCCTCCCCCATCAGCAATCCCACAGGCGACGCCAGCCGGACTGGAACCGGTGATATGGATAAGGACGCCGGCGAAGATGGGATACCATTGTTGCAGTGTCCGCATTGCGATCGCACCTACCAGATGAAGTCCCGGCTGAATAATCACATACGGGATGTTCATGTAAACGGCGATCGCAAGCGCAAGGAGGCAATCAAGCGTTTCCTGTGCTCCCTGTGCGGCATGGAGACCGGATCGGCGGCCGCCCTTGTAACGCACACGCGTCGCCACACCGGTGAGAAGCCCTTTAAGTGCGATCTGTGCGAGATGGCCTTTCCCAGACACTCGGAGTTGGCCTCCCATCGCCGAATGCACACCGGCGAGAAGCCATTCCACTGCACAGTCTGCGGCAAGGACTTCGCCCGCTCCGACAAGCTCAAGCGCCACATGCTCACGCACAGCGGTCTGAAGCCGCACAAGTGTACGTACTGCGAGAAGAGCTATCGCCAGGCCAAGGATCTGAAGCTCCATCTGCAGCAGCATACCGGCGAGTGTCCGTTTGTGTGCGGCACCTGCGGCGAACGATTTATACAGAGCAGCACACTGGAGAAGCACCGCCTGATGCGACGCCACTTTGACGAAGTGGAAGCCTGGCCAAGGCGTCTAAAATAA
Protein Sequence: MKLPVMCRTCDSTDTDNLLKLATPSKKYPEKLLSEILTELTDIHVNASGTQKLPQCLCSSCTKKLMGAYCFVKQALVANELLMGHLKNGSAPSATDCLQEAPMELCAEQHVEVKLETEDEECGGNDVSITCSDLPESGERDVESKKSVDPLTMIETVKLEGELPNLERPVEEEPTSDFDDEGSLDNLPLNKRIEKWKARRMPVFKCHECPRSFKRNEYLKRHEIRVHQPETHWFACSLCVRKFSRSEALEAHLKVHTRSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVSLGVRPNVQPHELAELFYPDAKDMDEEQLIGLIRKDLASGIYQRFYSITNQSGYEMDLDSSETDSDADGEPEDQQNKRRRKNRRGSYTCELCQQKFPRKYQLYDHQRQSHSWSEAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITCPECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLREQDIPLAETLIAATSRPNGTKRITCRMCNLHFDRIMDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETEDEMQSSSGGRHVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRLGQCSSKEKMYTCGKCSYKFMWPENLEQHARLQHSESSPISNPTGDASRTGTGDMDKDAGEDGIPLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAIKRFLCSLCGMETGSAAALVTHTRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWPRRLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00581676;
90% Identity: iTF_00531787;
80% Identity: -