Daus002914.2
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000007.1:976999-979778[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-123 1.6e-119 399.4 27.5 1 299 60 351 60 352 0.99 2 2 0.1 1.5e+03 -1.1 3.7 210 241 371 401 353 425 0.53
Sequence Information
- Coding Sequence
- ATGGAATCGATATTGGGCgatcaaataaataataaaagtgtCACAGCTGTAGATGATCAGGCTTCTCCTACAACTACAGCACCATGTCTTATTGACGATAATGACGAACCGTGCGACGACGACAGTGAGTCGGAAGATGAAGTATTAGTGCAATTTTTGGGCGAGGCAAACCGCATTgCTGAAGCGCGTTTGGCAGCGCGTCGGCAAGCTCGGGCCGAGGCTCGAGAAATACGCATGCGGGAGCTTGAGCGCCAACAAAAGGAGCAAGAACAGAATGCCGACCGAGTCTTTGATATGCAAAACACCAGTGGCGGCAGTGGAGACACAATTTCTAGCCATCCTGCACGTCTTGTATACGGCGGTGGCCTTTTAAATGTAACCCGTGCCACAGCATCGCGTCGCAGTAGCGAGGATTCATTAGAAGATGAAAGCCGAAGTTTACGGGACATGAAACATGAGCTCAAAGACGTTGAAGAACGCTTCCGAAAAGCTATGATAACGAATGCTCAGCTAGACAATGATCGTGCCTCACAAACTTACGAAGTCAAGCTACTCAAGGACAGAAGCGAAACCATGCAGGAATCGTTGGCTCAGCTTCAACGCGAGTACAAGGAGAAAATGCGCGAATATAATGCATTGAAACGTAACTTGGATCGCACCACTTTGGAGCTACAACTGGTTCAGGGCCAGTTGAATGAGCGCGATTCTTTGATAGCGGAACAGGGTCTTGTGATTGTAGCTATTGAGAATTCCGATGGCAGTGATGCCAAGCGGGCTCTAGTCAGTGTTGATAACGCCAATGTCTTAGCCTCTGTGCAGGGTTCGTTAGATGTAAgacttaaaaaatttagcGAAGATAAACAACAGCTTCTTGCAGAGGTTAAGAAGCTTAATGATCAATTGGAAGAGTATAAACGTGACGGGAAAATAGGCCATGGCAGTTCATCGTATGGAACGTTCGGCTATGACGATGATTATGAGGCTCAGAgagaagcaaataaaataatttcggATTATAAGTATAAACTGCAAAAGGCTGAACAAGAAATTGCAAGTCTGCAGGCGAGCTTAGCACGTTCAGAAACTCAGGTTATACGATACAAGAGCACAGCTGAAGCAGCTGAGAAAGCGGAGGCCGAATTAAAAGTGGAACGGCGTAAACTGCAACGTGAGAACCGTGAAGTTTTGGAACGACTGGAAGAAGCGGAAACAGCTAATAATCATTTACTGAAACGGcttgataaattaaaaaatgcaaagagCGCAATCCTCAAGGACTTATGA
- Protein Sequence
- MESILGDQINNKSVTAVDDQASPTTTAPCLIDDNDEPCDDDSESEDEVLVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQNTSGGSGDTISSHPARLVYGGGLLNVTRATASRRSSEDSLEDESRSLRDMKHELKDVEERFRKAMITNAQLDNDRASQTYEVKLLKDRSETMQESLAQLQREYKEKMREYNALKRNLDRTTLELQLVQGQLNERDSLIAEQGLVIVAIENSDGSDAKRALVSVDNANVLASVQGSLDVRLKKFSEDKQQLLAEVKKLNDQLEEYKRDGKIGHGSSSYGTFGYDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREVLERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600311;
- 90% Identity
- iTF_00612068;
- 80% Identity
- -