Daus013930.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila austrosaltans
Gene Symbol
sip1
Assembly
GCA_035045865.1
Location
JAWNOQ010000083.1:1949208-1952014[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-93 5.6e-89 299.1 14.3 1 275 415 684 415 684 0.98
2 2 0.096 9.5e+02 -0.1 0.0 157 203 696 739 689 740 0.73

Sequence Information

Coding Sequence
ATGTCGGACAATGAATATGAGCGATTTGAAATTACTGACTACGACTTGGACaatgaatttaatataaatcgACCGCGCGGCAGGCAAAGCAAGCACCAGCAAATTTATGGCATTTGGGCGGATGGAGATGACAGTGAGGAGGATGAAGGAAGTCGACAATCCCGTACCCGGTCTCGGGCACCCAAGGATTACACGATGCCCGTAAATTTTGTGGCCGGTGGAATCCAACAAGcaggcaagaagaagaagaaaaaggccATTGAAGACGGCGCCAATGGTGAGGGCAATGATAAGGATAAAGATGATGTTGAGAAAGTGGAAAATAGTGATGAATCTAGTGAAAATGATCGTCCCGCGTTTGGCAATCAAAAAAGCACGGATGACTCCTCATCGGAAGAGGAACAAAAGCCCATGATGGGAAAGATTAAAGGACAAACTGCTGGATTAAGGCATCGCTCTCACATAGCCAGTGATCGTAATGTGGGAGCCTGGGAGCAACACACCAGGGGCATAGGTGCCAAATTGTTGCTACAAATGGGCTATGAGCCGGGCAAGGGTCTGGGTAAGGATTTGCAGGGTATATCCCAGCCAGTGCAGGCCCATGTAAGGAAAGGGCGCGGAGCTATTGGCGCCTATGGACCCGAGACAGCAGCAAGTATTGGCGGAAAAGGAAAACCCAGCATAAAAGTAGATGAAGATGTACAAGAGGCCAAAGATTTCAAAGATCAGATGAACAAATGGCGTAAGGGCGGCGCCGGAGGAGCAGCCGAAGGTCAGGAAAAGTCTGGCAAACGCTACTATTACAAATCAGTGGAAGAGGTCATAGCCAAGGGGAAGAAATCCCAGCATTTGTTGTCTGagaaattaagcaaaaaattaGGCAACGTTCCAGTGATCGATATGACGGGACCGGAGAAGCGTGTTCTTAGTGGTTATCATGCATTGGGGCAGGCCAAAGTTGCCATGGACGACACAGAAGAAAAAGTAGGTGAACAAGGCAGTGGAGTCTCCGTCTTTGCCATGCCGGAATTGACTCACAACTTGCAGCTTTTAGTCAGCCAATGCGAACAACAGATCATATCAATTGACAAATCTGAGCGGGAATCATCGAGTCAGCAACAGGCCTTAGAAATTGAATACAAACACCTCCAGGAAATAGTCCAACTCGAAAGGAATCACATTAAGACTCTTGAAGAGGCTTTGGAACGGGTGGAAAAGCTGAGTGAAGATCCCGACATAAGTCTATCGCAGGCGGAACACTTATTCCTTGAACTAATTCATGACTATTCATCAGAATTCAAAGAATTCGGACTCGCTGATTTGGCTGCTGGCGTAATTGCACCACTCATGAAGAGGGAATTGGCCAGCTGGCAACCTTTGGAGCAGCCAACAAAACCTCTGCAACTGATAAAGAAATGGCGCAGTATGCTCCAGAATGGAGATCTCAATGAACAAAAGTCACGCAATGTCTTTGATCCATACTCTTCGTTAATCTGGGCCGGTGTGATGCCATCATTTCGTGCATGTGCCTCCAGTTGGCCGCCAAAAGATTATTCTCCCATGGCTGCTCTCCTCGATGCTTGGGCCCCATTGATGCCCACCTGGGTGTTGGATTCGGTTTTAGAGCAACTAATCTTACCCCGACTGGCTAAAGGTGTTCAGGAATGGGATCCATTGACCGACACGGTTCCCATACACAGCTGGATCTTACCGTGGCATAATATTTTGGGCCCCAAACTGGAAGAATCAATATATCCACAGATTAGAGGCAAACTGGGTGCAGCTCTACAATCCTGGTCGCCACAGGATCGCTCTGCCAGGGCCATGCTAACACCCTGGCAACAGGCATTCCCTGAAGATGAATTGgtccattttcttttactgCATATTATAccaaaattacaaattgttcTGGGTGAATTCATTATCAATCCATTGCATCAAGATCTTGAAATGTGGCATCAGGTGTGGGAGTGGCACGAATTGATACCACCCATGCATATGGCCAATCTCTTGGATAAGCATTTCTTTCCACGATGGATGCAGGTTCTGGTATTATGGTTAAATCAATCACCTGACTATGCGGAAATCTCACGCTGGTATACCGGCTGGAAGAGTATGCTGAGTGAACCACTTCTACGTGAACCCTCGGTAAAGGAGCATCTACGTCGTGCATTGGAAATGATGCATCGTGCCACAGATGCAATGCTTCAACCAACAACTGCCACACCACCGCCGCCTGTgccaccagcaccaccaaGTTCAGTGCTCTTGCCGCCCGTAATGATCATGGATATGGCACAACCCGCTCAACTGGAATTCAAGGAGTTGGTCTCACAGAAATGTTCCGAATTGGGTATCATTTTTGCCCCTCTGCCTGGTCGTCGTGAAATGGGCAAACAGATTTATCGTGTGGGCAAACTTTTTTGCTATATTGATCGAAACGTTTGTATGTTGAGCGATGGAAACTTTAGCAATTGGCAGCCTGTGGGTCTCAATCAGTTATTGGAACGTTCACAAACTGGAATAATGTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSKHQQIYGIWADGDDSEEDEGSRQSRTRSRAPKDYTMPVNFVAGGIQQAGKKKKKKAIEDGANGEGNDKDKDDVEKVENSDESSENDRPAFGNQKSTDDSSSEEEQKPMMGKIKGQTAGLRHRSHIASDRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKGKPSIKVDEDVQEAKDFKDQMNKWRKGGAGGAAEGQEKSGKRYYYKSVEEVIAKGKKSQHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKVAMDDTEEKVGEQGSGVSVFAMPELTHNLQLLVSQCEQQIISIDKSERESSSQQQALEIEYKHLQEIVQLERNHIKTLEEALERVEKLSEDPDISLSQAEHLFLELIHDYSSEFKEFGLADLAAGVIAPLMKRELASWQPLEQPTKPLQLIKKWRSMLQNGDLNEQKSRNVFDPYSSLIWAGVMPSFRACASSWPPKDYSPMAALLDAWAPLMPTWVLDSVLEQLILPRLAKGVQEWDPLTDTVPIHSWILPWHNILGPKLEESIYPQIRGKLGAALQSWSPQDRSARAMLTPWQQAFPEDELVHFLLLHIIPKLQIVLGEFIINPLHQDLEMWHQVWEWHELIPPMHMANLLDKHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALEMMHRATDAMLQPTTATPPPPVPPAPPSSVLLPPVMIMDMAQPAQLEFKELVSQKCSELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDGNFSNWQPVGLNQLLERSQTGIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00919049;
90% Identity
iTF_00600309;
80% Identity
-