Dari010977.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila arizonae
Gene Symbol
Hr39
Assembly
GCA_001654025.1
Location
NW:13298873-13332725[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.2e+04 -10.1 21.2 35 154 193 315 169 332 0.32
2 3 0.25 1.5e+03 -2.3 5.5 52 170 283 397 260 410 0.68
3 3 3.8e-98 2.3e-94 316.6 27.6 1 408 482 890 482 890 0.85

Sequence Information

Coding Sequence
ATGCCCAATATGTCGAGCATTAAGACGGAGCAAAGCGTTTCTCCAGGTGCCAGCGGCAGCTATCAGCTGCCCGTTAACATGTCCACGCCCACTGGGCGTCACAATGTCTCCGTGACGAACATCAAGTGTGAGCTGGACGAGCTGCCCACGCCGAATGGGAATCTGGTGCCGGTCATAGCCAGCtacaataatcataatcacaATCATAGTAATCACAATAATCACAACAATCACAATCATGGCCTGCGTATACCGCTgggaggaggcggcggcgaGCACAACAAGGAGGAGGACGAGTCCGATTCGGAAGCGGAGCTGGCCAACATTGAGAATCTGAAGGTGCGTAGACGTGCGGCCGACAAGAATGGACCACGTCCCATGTCCTGGGAGGGCGAGCTGAGCGACGCCGAGACGAACGGCCAGGAGGCGCCCGACGAGGAGCTCATGGAAACGGAGACGGTGGTGAAGAGTGAGTCGGGCAGTGCTGCCGGGGGCGTTGTCACGACCATGCTGCAGCCCATCAAGACGGAGCTGGAGCACATAGCCGGcgagatgcagcagcaacagcaacatctgcaggagcaacaacagctacagcagcagcagcagcatcagcaactccagcagcaactgcagagccacaagcagcagcagagctacaagctgaagctggcgcCCACCCAAAGTGATCCGATTAATCTGAAATATGAACCAGTTGCCACATCCAATTCGACAACGTCGCTCTGCGATCGCAGCAAGTCGAGCAGCGGCGGCCacttgccgctgctgccggccAATCCCAGTCCCGATTCTGCCATACATTCCGTCTACACGCACAGCAgtccgtcgcagtcgccgctgaCGTCACGGCACGCCCCCTACACGCCGTCGCTGAGCCGGAATAACAGCGATGCGtcgcacagcagctgctacagctacagctccgAGTTCAGTCCCACCCACTCGCCGATTCAGGCGCGTCATGCGCCGCCCGCCGGCTCCGCCCTGTTCCCGGGCCATGCCAATGGCGGCGTCGGCTCTGGAGCACTGCATCATCATAGCGTGCTGTATCCGCCATTGAATGTGGATgctgccgcagcggcagcggctgccgcgCAGGAGGCGCAAAATCTCAGCATggatggcaacagcagcagcagcagcgtcctGGACACCTCGGCCACGCTGCCAGCCTCCCCTGCGGGCATATCGCGGCAGCAGCTCATCAATTCGCCCTGTCCGATTTGCGGGGATAAGATCAGCGGCTTCCACTACGGCATCTTCTCCTGCGAGTCGTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAATCGCAAGaactatgtgtgcgtgcgcggcGGCCCCTGCCAGGTGAGCATTTCCACGCGCAAGAAGTGCCCGGCCTGCCGGTTCGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATACGCGAGGATCGCACACGGGGCGGTCGCTCCACCTATCAATGCTCCTACACGCTGCCCAATTCGATGCTCGGCCCACTCTTGAGTCCAGATCAGgcggctgccgcagcagcagctgctgccgtcgtcagtcagcaacagcagcaacagcaacagcagcagcaacagcagcagcagcatcagagattgcagcaacatcatcatcaacagcagcaacagcaaccccagcaacatcatcagcaacaacagcagcagcatcaacatcaacaacaacaacaacagccacataATCCACTCAATGGCTTTGGCAGTGGGTCCAATTCACTGCCAGCCAGTCCCAGTCTCGGCGCATCCATCAAGACGGAGCAAACAGATTCGCTCAGTCATTATGCATCGTCGCGAGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAACATCTCTGGCAATATACCGATGCGGAATTGGCGCGCATCAATCAGCCGCTGTCCTCGTCGGCTGGCGGCTCCTCGTCGAGCGGCACGGGTGGCGGTTCAAGTTCCGCCGGACAGCACACAGCCAACGCACAACAGGTGACCAATCCACTGCTGGCCAGTGCGGGTCTCTCGTCCAATGGCGAGAACGCCAATCCCGATCTGATTGCCCATCTCTGCAACGTGGCCGATCATCGGCTCTACAAGATCGTCAAATGGTGCAAGAGTTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATCAACTCGTGGTGTGAACTGCTGCTCTTCTCCTGCTGTTTTCGTTCCATTGACACGCCGGGCGAGATCAAGATGTCGCAGGGCCGCAAGATAACGCTGGCGCAGGCCAAAACAAATGGCTTACAGGCCTGCATTGAGCGCATGCTGAATCTGACGGATCATTTGAGACGCCTGCGCGTTGATCGTTACGAATATGTTGCCATGAAGGTGattgtgctgctgcagtccgATACCACGGAGCTGCAAGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGCTCTGCAGGCGTACACGCTGGCCCATTACCCGGACACGCCGTCCAAGTTtggggagctgctgctgcgcataCCCGATCTGCAGCGCACGTGTCAGCTGGGCAAGGAGATGCTGACGATCAAGACGCGCGACGGTGcagatttcaatttgctgatGGAGCTGCTGCGCGGAGAGCATTGA
Protein Sequence
MPNMSSIKTEQSVSPGASGSYQLPVNMSTPTGRHNVSVTNIKCELDELPTPNGNLVPVIASYNNHNHNHSNHNNHNNHNHGLRIPLGGGGGEHNKEEDESDSEAELANIENLKVRRRAADKNGPRPMSWEGELSDAETNGQEAPDEELMETETVVKSESGSAAGGVVTTMLQPIKTELEHIAGEMQQQQQHLQEQQQLQQQQQHQQLQQQLQSHKQQQSYKLKLAPTQSDPINLKYEPVATSNSTTSLCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGHANGGVGSGALHHHSVLYPPLNVDAAAAAAAAAQEAQNLSMDGNSSSSSVLDTSATLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLGPLLSPDQAAAAAAAAAVVSQQQQQQQQQQQQQQQHQRLQQHHHQQQQQQPQQHHQQQQQQHQHQQQQQQPHNPLNGFGSGSNSLPASPSLGASIKTEQTDSLSHYASSRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSSAGGSSSSGTGGGSSSAGQHTANAQQVTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQALQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH