Dano019149.1
Basic Information
- Insect
- Drosophila anomelani
- Gene Symbol
- ftz-f1
- Assembly
- GCA_035045905.1
- Location
- JAWNOO010000165.1:19075678-19088313[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.62 6.8e+03 -3.6 15.0 53 124 105 169 50 185 0.38 2 3 2.7e-19 2.9e-15 56.9 0.5 1 76 356 431 356 464 0.74 3 3 7.1e-71 7.8e-67 226.7 1.6 157 408 573 817 558 819 0.93
Sequence Information
- Coding Sequence
- ATGTTATTAGAAATGGATCAGCAACAGGCGACCGTACAGTTTATATCGTCGCTGAATATATCGCCGTTCAGCatgcagctggagcagcagcagccctcCAGTCCAGCTTTGGCCACGGGTCccagcggtggcggcggcggcggtggtggtaatagtaataacaataacaacaatagcaacaccaccagcagcagcaacaataataataacaacaacaacaacaacaatgataATGTCTTGACCAAATTTGAGCATGAATATAATGCTTATACCCTGCAATTGGCGGGAAGTAACAGTGGTGgcaatcagcagcagcagcaacatcacaATGCACaccatcaacaacaacaacaacaacagcagcagcagcaacaccaacagcaacagcaacaacaacaggagcactaccaacaacaacaacaacagaataTAGCCAACAATGCCAATCAATTCAATGCGTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTTCCGACAGGCTATCAGGACACCACCTCCTCGCATTCCCAACAAAGcgctggcggtggtggcggcggcggcggtggaaaTGGCGGCGGCAACCTCCTAAACGGCAGCTCCGGCGGCTCATCCGTTGGCGGTGGCTATATGCTCCTCCCCCAAGCGGCCAGCTCCAgtggcaataataataataacaacactGGTGGTCACATGTCCTCCGGTTCTGTGGGCAatggcggcggaggaggcggtggcggcagcGGTGGAGCTGGTGGCGGTCCTGGCAATTCCATGGGCGGCACTAGTGCCACGCCAGGACATGGCGGCGGCGAAGTGATCGACTTTAAGCATTTGTTCGAGGAACTGTGCCCCGTTTGCGGCGACAAGGTCAGTGGGTATCATTACGGCCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGAACGGTGCAGAACAAGAAGGTGTACACCTGTGTGGCGGAACGATCCTGCCACATTGACAAGACGCAGCGGAAGAGGTGTCCCTACTGCCGATTCCAGAAGTGCCTAGAAGTCGGCATGAAATTGGAGGCTGTTCGAGCGGATCGGATGCGGGGAGGACGAAACAAATTTGGACCGATGTACAAGCGAGATCGGGCGCGGAAACTGCAAGTAATGAGGCAGCGGCAGTTGGCACTGCAGGCGCTTCGCAACTCGATGGGTCCGGACATAAAGCCAACGCCGATCTCGCCGGGCTACCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATTCAAATACCTCAGGTATCCTCACTTACCCAATCGCCGGACTCGTCGCCCAGCCCCATTGCCATTGCGCTGGGACAGGTGAATGCCAGCACGGGCGGTGTGATAACCACGCCCATGAATGCCGGCAacggtggcagtggcagcggcaatGGCGGGGGTCTGAATGGTCCCAGTTCCGTGGGCAATGGCAAtagcagcaacggcagcagcagcagtaccggcggcggcggcaataaCAATGGCAGCAGCACGGGCAATGGAGCGtccggtggcggcggcggcggcggtggaggaggaggaggtggcaaCAATgcgggcggcggcggaggcggaggtggCAATAACTCCGGAGATGGCCTGCATCGTAATGGTGGCCACGAGGCTGGAATAGGATCTCTGCAGAACACGGCCGACTCGAAATTGTGctttGATTCCGGCACACATCCATCGAGCACAGCCGATTCGCTTATCGAGCCATTAAGAGTCTCACCAATGATTCGTGAATTTGTGCAATCAATCGACGATCGGGAATGGCAGACGCAGCTATTTGCTCTGCTGCAAAAGCAGACCTACAACCAGGTGGAGGTGGATCTCTTCGAGCTAATGTGCAAAGTGCTCGACCAGAACTTGTTCTCGCAAGTGGACTGGGCACGGAACACGGTCTTCTTCAAGGACCTCAAGGTCGACGATCAAATGAAGCTGCTGCAGCATTCGTGGTCGGACATGCTGGTCCTGGATCACCTGCACCATCGCATCCACAACGGCCTGCCCGATGAGACGCAGCTGAATAATGGCCAAGTCTTCAATCTGCTGAGTCTGGGCCTGTTGGGTGTACCACAGTTGGGTGACTACTTCAACGAGCTGCAGAACAAGCTGCAAGATTTGAAATTCGATATGGGCGACTATGTCTGCATGAAATTCCTAATCCTCTTGAATCCAAATGTGCGGGGTATTGTCAACCGGAAGACCGTCTCCGAGGGACATGATAATGTGCAAGCCGCTTTGCTGGACTACACCCTCACCTGTTATCCGTCAGTTAAtGACAAATTCAGTAGGCTAGTGAACATCTTACCGGAAATCCATGCCATGGCCGCACGCGGCGAGGAGCATCTGTACTCCAAGCACTGTGCCGGCAGTGCGCCAACCCAAACGTTGCTCATGGAGATGCTACATGCCAAGCGCAAGGTGTAG
- Protein Sequence
- MLLEMDQQQATVQFISSLNISPFSMQLEQQQPSSPALATGPSGGGGGGGGNSNNNNNNSNTTSSSNNNNNNNNNNNDNVLTKFEHEYNAYTLQLAGSNSGGNQQQQQHHNAHHQQQQQQQQQQQHQQQQQQQQEHYQQQQQQNIANNANQFNASSYSYIYNFDSQYIFPTGYQDTTSSHSQQSAGGGGGGGGGNGGGNLLNGSSGGSSVGGGYMLLPQAASSSGNNNNNNTGGHMSSGSVGNGGGGGGGGSGGAGGGPGNSMGGTSATPGHGGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGGVITTPMNAGNGGSGSGNGGGLNGPSSVGNGNSSNGSSSSTGGGGNNNGSSTGNGASGGGGGGGGGGGGGNNAGGGGGGGGNNSGDGLHRNGGHEAGIGSLQNTADSKLCFDSGTHPSSTADSLIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPNVRGIVNRKTVSEGHDNVQAALLDYTLTCYPSVNDKFSRLVNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00581562;
- 90% Identity
- iTF_00594580;
- 80% Identity
- iTF_00478066;