Basic Information

Insect: Drosophila anomalata
Gene Symbol: -
Assembly: GCA_035046425.1
Location: JAWNNY010001693.1:178401-184472[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1e-05 0.0018 18.8 2.1 1 23 225 247 225 247 0.97

2 18 6.9e-06 0.00059 20.3 0.4 1 23 253 275 253 275 0.97

3 18 0.001 0.087 13.5 0.9 1 23 281 303 281 303 0.95

4 18 1.5e-05 0.0013 19.3 3.1 1 23 309 331 309 331 0.97

5 18 3.3e-05 0.0028 18.2 4.7 1 23 337 359 337 359 0.99

6 18 6.1e-05 0.0052 17.4 5.7 1 23 365 387 365 387 0.97

7 18 3e-07 2.6e-05 24.6 4.3 1 23 393 415 393 415 0.98

8 18 1.1e-07 9.1e-06 26.0 2.4 1 23 421 443 421 443 0.97

9 18 6.2e-05 0.0053 17.3 6.7 1 23 450 472 450 472 0.97

10 18 0.00011 0.0093 16.6 6.5 1 23 478 500 478 500 0.98

11 18 9.7e-06 0.00083 19.9 4.5 1 23 506 528 506 528 0.98

12 18 7e-06 0.0006 20.3 8.1 1 23 534 556 534 556 0.98

13 18 5.7e-06 0.00049 20.6 7.6 1 23 562 584 562 584 0.97

14 18 6.4e-07 5.5e-05 23.6 7.7 1 23 590 612 590 612 0.98

15 18 0.0002 0.017 15.7 9.5 1 23 618 641 618 641 0.95

16 18 7.3e-05 0.0062 17.1 0.9 1 23 647 669 647 669 0.98

17 18 0.00077 0.066 13.9 3.4 1 23 679 701 679 701 0.97

18 18 8.8e-06 0.00075 20.0 1.6 1 23 707 730 707 730 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1e-05	0.0018	18.8	2.1	1	23	225	247	225	247	0.97
2	18	6.9e-06	0.00059	20.3	0.4	1	23	253	275	253	275	0.97
3	18	0.001	0.087	13.5	0.9	1	23	281	303	281	303	0.95
4	18	1.5e-05	0.0013	19.3	3.1	1	23	309	331	309	331	0.97
5	18	3.3e-05	0.0028	18.2	4.7	1	23	337	359	337	359	0.99
6	18	6.1e-05	0.0052	17.4	5.7	1	23	365	387	365	387	0.97
7	18	3e-07	2.6e-05	24.6	4.3	1	23	393	415	393	415	0.98
8	18	1.1e-07	9.1e-06	26.0	2.4	1	23	421	443	421	443	0.97
9	18	6.2e-05	0.0053	17.3	6.7	1	23	450	472	450	472	0.97
10	18	0.00011	0.0093	16.6	6.5	1	23	478	500	478	500	0.98
11	18	9.7e-06	0.00083	19.9	4.5	1	23	506	528	506	528	0.98
12	18	7e-06	0.0006	20.3	8.1	1	23	534	556	534	556	0.98
13	18	5.7e-06	0.00049	20.6	7.6	1	23	562	584	562	584	0.97
14	18	6.4e-07	5.5e-05	23.6	7.7	1	23	590	612	590	612	0.98
15	18	0.0002	0.017	15.7	9.5	1	23	618	641	618	641	0.95
16	18	7.3e-05	0.0062	17.1	0.9	1	23	647	669	647	669	0.98
17	18	0.00077	0.066	13.9	3.4	1	23	679	701	679	701	0.97
18	18	8.8e-06	0.00075	20.0	1.6	1	23	707	730	707	730	0.96

Sequence Information

Coding Sequence: ATGCAACACGTGAGCGCTGCCAGCTCGGTGCCATCGGTAGTAGCCCCCGTAGTGACCACTGGTGGTACAACGATAACCTTGGGCGGACCCCCACACACGCTCCCCAAATCGGAGCACAAAGACGATGGCAAGCCGCCGCACGGCTTGGAGATGTACAAGGTTAATATCGAGGACATCTCACAGCTCTTCACCTACCACgaagtttttggcaaaatcCACGGCGATGTTGTGAATCATCAATTGGCGGCTGCCCATGGTGGCCAGTTACCGCCCCCGCCGCCACTACCGCCGCAGGCCAGCAGTCATGCGGCGAGTGCGGCGGCCGCAGCAGCGGCTGCATCCACAAATAATGCAGCTGTGGCGGCAGTAATGGCCTCCGCCAatgcagcggcggcggcagcagcagccgcatcGGCAGCGGGAGGCGGCGGGGGACTACCGCCAGCTACCAGCGGAAATGGTGGCCAAGTGACTGTGACGACGACGAGCAGCTCGACGGCCAGTAGCAGCGGCGGCGCTGGAAGTACTACCAGCGGCACTACGACCACGGCGGGTGAGTTGCTAATGCCTAAAATGGAGGGAGGCATACATAACGTGgacggcagcggcggcggcggcgggcaGTCGAACGTGGCGCTGGCGCCGGACGGTACGCCGATTGCGACGGGGACGCACGTTTGCGACATTTGCGGCAAGATGTTCCAGTTCCGGTACCAGCTGATCGTACACCGGCGCTATCACAGCGAACGTAAACCGTTTATGTGCCAGGTGTGCGGTCAGGGCTTCACAACGTCCCAGGATTTGACCCGCCACGGCAAGATACATATTGGCGGTCCGATGTTCACCTGTATCGTgtgctttaatgtttttgcTAACAACACGAGTCTGGAGCGGCACATGAAACGGCACTCGACGGACAAACCGTTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCATCTGGACAATCACTTTCGGTCGCATACGGGCGAAACGCCATTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAACCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACCCCCCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAACCACATACTCTGGCATACAGCAGGCGAGACGCCGCACCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAACACTTGCTCAACCACGTGCGCCAGCACACGGGAGAGTCGCCGCACCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCACCTGGTCAACCACATCCGGCAGCACACGGGTGAGACACCGTTCAAGTGCACCTACTGCACGAAAGCGTTTACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAGTCGCCGCACAAGTGCACATACTGCACCAAGACGTTCACGCGCAAGGAGCATTTGACGAATCATGTGCGCCAGCATACGGGCGACTCCCCGCATCGCTGCTCCTACTGCAAGAAGACCTTTACGCGCAAGGAGCATTTGACGAATCATGTGCGCCTGCACACGGGCGACTCGCCGCACAAGTGCGAGTACTGCCAGAAGACGTTCACGCGGAAGGAGCACCTCAACAACCATATGCGCCAGCACTCTAGCGACAATCCGCACTGCTGCAATGTCTGCAACAAGCCATTCACGCGCAAGGAACACCTGATCAACCATATGTCCCGATGCCACACCGGCGACCGGCCCTTCACCTGCGACACATGCGGCAAGTCGTTCCCATTGAAGGGTAATCTGCTCTTCCACCAGCGCAGCCATACCAAGGGCCAGGAGATGGAGCGTCCCTTTGCCTGTGAGAAGTGCCCCAAGAACTTTATCTGCAAGGGTCACTTGGTCTCGCATATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACTCTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCACAAATACCGGCTGGTGTGCTGACGCAAGTCAAGCAGGAGGTGAAACCGATCATAATTCCCCACCACTCGGCGGCGACGACCACGATGCACACCATCCAGCAGATAACGGCTGGAGCTGCAACGCAATTGACACCGGGTCTCGTGCCGCTGGTCACCTCGACGCTCATCTCGCATAACCCACAATCGCAAAAGCAGcaagcagccgccgcagcGGTTGCCCAGCAACAagccgcagctgcagctgccgccCAGCAGCAGGCAGCCCAGCAACAGGCAGCAGCGGCCcatcagcaacaccagcagcaagTGGCCGCCGcccatcagcagcaacagcaggcggCTGCTGTCCAGGCAGctcaccaacaacagcagcaacagctccaacagcagcagcaattgcTGCAGCTTTCCATTCAACAGGCGGCGCATCACCATCAACAGGAGCAGCATcgccaacagcagcagcaacaacagcagcagcaacaccagcagcagcaacaacagcaacagcaccatcagcaacagcaaggcCATCCACAGGCACCaccgccgcagcagcaacagcagccaccgCCGCAGGTTCCGATTGCATTGATAAGCGATCCAAGCGCTCTGGCACGTGCCGCCATGCAGCTGCAACATTTGCCGGCGAATGTGGAGCAACACCCGGTTGTTTACTAA
Protein Sequence: MQHVSAASSVPSVVAPVVTTGGTTITLGGPPHTLPKSEHKDDGKPPHGLEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAHGGQLPPPPPLPPQASSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAGGGGGLPPATSGNGGQVTVTTTSSSTASSSGGAGSTTSGTTTTAGELLMPKMEGGIHNVDGSGGGGGQSNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCDTCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSAATTTMHTIQQITAGAATQLTPGLVPLVTSTLISHNPQSQKQQAAAAAVAQQQAAAAAAAQQQAAQQQAAAAHQQHQQQVAAAHQQQQQAAAVQAAHQQQQQQLQQQQQLLQLSIQQAAHHHQQEQHRQQQQQQQQQQHQQQQQQQQHHQQQQGHPQAPPPQQQQQPPPQVPIALISDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00505532;
90% Identity: iTF_00507738;
80% Identity: -