Basic Information

Insect: Drosophila anceps
Gene Symbol: -
Assembly: GCA_035045945.1
Location: JAWNON010000225.1:23440189-23443322[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.3e-05 0.0058 17.0 5.0 1 23 170 193 170 193 0.97

2 17 0.0016 0.12 13.0 5.1 1 23 233 256 233 256 0.96

3 17 0.0029 0.2 12.2 2.8 1 23 313 336 313 336 0.94

4 17 0.0034 0.24 11.9 0.7 2 23 388 409 387 409 0.97

5 17 0.037 2.6 8.7 1.3 1 23 489 515 489 515 0.96

6 17 2.8 2e+02 2.8 0.7 1 19 522 540 522 543 0.72

7 17 0.014 1 10.0 0.6 1 23 552 574 552 574 0.95

8 17 0.00027 0.019 15.4 2.1 1 23 581 603 581 604 0.95

9 17 0.00044 0.031 14.8 1.4 2 23 612 633 611 633 0.96

10 17 0.0044 0.31 11.6 0.1 3 22 661 680 660 683 0.91

11 17 0.036 2.5 8.7 2.9 1 23 719 742 719 742 0.96

12 17 0.29 20 5.9 0.6 1 22 749 770 749 770 0.97

13 17 0.012 0.85 10.2 2.4 1 23 779 802 779 802 0.97

14 17 1.6e-05 0.0011 19.3 0.5 1 23 821 844 821 844 0.97

15 17 0.037 2.6 8.7 0.2 1 23 854 876 854 876 0.94

16 17 2.4e-05 0.0017 18.8 3.3 1 23 882 904 882 904 0.99

17 17 5e-05 0.0035 17.7 0.9 1 23 910 932 910 932 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.3e-05	0.0058	17.0	5.0	1	23	170	193	170	193	0.97
2	17	0.0016	0.12	13.0	5.1	1	23	233	256	233	256	0.96
3	17	0.0029	0.2	12.2	2.8	1	23	313	336	313	336	0.94
4	17	0.0034	0.24	11.9	0.7	2	23	388	409	387	409	0.97
5	17	0.037	2.6	8.7	1.3	1	23	489	515	489	515	0.96
6	17	2.8	2e+02	2.8	0.7	1	19	522	540	522	543	0.72
7	17	0.014	1	10.0	0.6	1	23	552	574	552	574	0.95
8	17	0.00027	0.019	15.4	2.1	1	23	581	603	581	604	0.95
9	17	0.00044	0.031	14.8	1.4	2	23	612	633	611	633	0.96
10	17	0.0044	0.31	11.6	0.1	3	22	661	680	660	683	0.91
11	17	0.036	2.5	8.7	2.9	1	23	719	742	719	742	0.96
12	17	0.29	20	5.9	0.6	1	22	749	770	749	770	0.97
13	17	0.012	0.85	10.2	2.4	1	23	779	802	779	802	0.97
14	17	1.6e-05	0.0011	19.3	0.5	1	23	821	844	821	844	0.97
15	17	0.037	2.6	8.7	0.2	1	23	854	876	854	876	0.94
16	17	2.4e-05	0.0017	18.8	3.3	1	23	882	904	882	904	0.99
17	17	5e-05	0.0035	17.7	0.9	1	23	910	932	910	932	0.98

Sequence Information

Coding Sequence: ATGACAAGGACGTGCAGAATCTGTGGTAGTACAAATGGACGTTATTGGATAGAGACGCCTTTTATTAAATACGCAAATAAAACGTACAATCAACTGCTGCTGGAGTTAACAAAGCTCGAGGTTGGATTGGATCAAGCCGAGAAGCTGCCACCCTGGATTTGTCGCAACTGTTCTCAGAGATTAGAGAATGCATACGACTTTGTGCAGCAAGCACGCAAAACTCATGAGCTCTGGCTGCAACAGCTTTCAAGAGAATCTTCGTCAGAGGACACACAAACAGCCACGTTGGAGTGTTTACGCGAGACTCCAATACAATTGCTAGATATAGAGGgtataacaattaaaatggaaGAGCCCACAGAACCTGTCATGCCATCGGCAGATCCAACTAACACAATTGATCCTTTGATTAAGAAGAGCAATGTGGATGGGGACAGCagcgatgatgacgatgatgatgtgcCCCTAAAGCAACGCCGGGCAGCACAGTCAAAATTTTCCATGCTGCACAAGTGCAATAAATGCGACAAGGCCTTTAAGTATGTAACCAATCTCTTCAGGCACAAGCAGCGAGATCACAGTTCACATAGGccaaaagaagcagaagagaaaCCTAATCAGGCGGAGCCAAACTCCAGCTCTATTGAGGCAAACAGCTGCGCGGACAActtggATAATGAATCTGTCGATAACTATTACAAATGCGATCATTGCGACAAATCCTACAAGTACATAATGCTGCTCATCAAACATAAGCATAAGGCGCATGTCTCCAGCCAGATATCATCACAGCCCAGGCTAAttaaagacaaaacaaaagaatccCAGCGGCAGCACTCGAAGCCGTCAAGCACAGATTCCCTTGTGCACAGCATCATCAAGGAGATAACCATTCCAGATGAGGATGATGCAGATAACTCTAGTGCAGACAATTACTACAAATGCGATCAATGCGAGAAATCCTACAAGTACATCGTTAGTCTCATCAAGCACAAGCATAACGACCACAAGGCGTATAAGGATtctgatgaagatgaagacgaAGCCACGTCAACTAGATACGCAACGGACACATCTGCCATGTCGAAACCCTCACGAATTGATCGTCGCGTCAAAGGCTTCGATTTACATCGCTGCAAGCCGAATGGCTCCAAGGAAATTCAATGCATGATCTGTCTGCGTAGATTTATCAAACTGCGCGAGTTACGCGACCATTTGAAGTCTCATCCTAAGGACTTTGCATTCGATGTTCATGGCGAGCCCATTGAACGGATTGCAGAGGGCTTTTATAAGACCGCCGTTGAATCAACAGCTGCCGGCTTAAAGCGGCGCATTTTCAATGATCTCAAAGTGGGCATGTACGGTCGGTATTACTCCATAACAAATGAGGCGCGATATGAGATGAATCTGGATAGCTCCGACACGGATAGCGATGGTGAGGCGGATGTTGTGGAGCGACACAGTTATTCATGTGAGCTATGCGACTCACCGGAGGCCGTGTTCCCACGTAAATATCAATTGCACGAACATCATCGACAGGAGCATACGTGGCTGGAGGCTCCTCATGTGTGTCAGCGTTGCGATGCTCGTTTTCTGAGCGCCCAGCTGCTGGATCATCATACACTCAAACTGTGTCAGAACACGCTCAAACGGTTCATGTGTGACAAGTGTCCGCAGCGTTTTTTCTGGCGGCGCAATTTGCGAGCGCATCTTGCAGATCACAAAAACAAGCAAGAGACATACCCATGCGACCAGTGCTCACGCAGCTTTCAGGATAAGAGCGCCGTGACCAAGCACAAGCTAATGCACCACGACGGCAACAATGAACTGTTACCCTGTCGTTGGTGCACACGCACTTTCTATCGACCCGCACTTTTGCACAAGCATGTACAGCGGCATGGGTTCAGTGGTGAGGATCTGCCCTTGGCAGAGACTCTGCTAGCAGATGCAGCCAAGACTTCCGGACCAAAGTCCATCTTATGCAAACTATGCGACATGCAGTTCATTAGCATTGGCGACCTTCGACGACACATTTCGATGCAGGCGCACACTGAAGAGGCGGCCAACTATATGATAAGCACCGAAGAGGGCTTTGAGCTGCTTCTGGATGAAACGGATGAGAGCGACGATGAGGCTGCAGGTTCTAGCAAAACTTACCGATGTGCTCTATGCGACATGAATTTTCAGCGACGGCGCGATATGTGTGAACATCAGTATTCTCTGCACACCTTTGACAAGTTGCCCTATTCCTGCGAGCATTGCATTTTTAAAACCGTCGACAAGACCATGTTGGCGCAGCATTTGAGAACGCAGTGCCTTAACCAGGACAAGAAATTCAAGTGCTCACGCTGTGGCTACAAATTCATGTGGCACGAAAATCTAGAGCTGCACATGTCGAGCCAACATTCCAAGTCATCCAATCAGGCACCTGTTGCGATCAAACGAAGCAGACGTTTTCGATATCAATGTCCACACTGCTGGCGCTCTTTTGTTGTACAGCCTAGCCTGGACAAGCATATACGCGACATGCATGTAGCCAAAAAGAATCCGGGCAAAAAATATCTATGCTCACTATGTGGTCTGGAGTCTTTAACACCCAACAAgctgaatatacatatgcgcCGACACAACGGCGAGAAACCTTTCAAATGCGATCTCTGCGACATGTCGTTTACCGTGCACTACGAACTGAAAGTCCATCGACGCAAACACACAGGCGAGCGACCCTATCAATGCACGTTCTGTGCCAAGGATTTCGCCAGGCCAGATAAGCTGAGGCGACATGTCTACATGCATAGCGTTAAGcgttaa
Protein Sequence: MTRTCRICGSTNGRYWIETPFIKYANKTYNQLLLELTKLEVGLDQAEKLPPWICRNCSQRLENAYDFVQQARKTHELWLQQLSRESSSEDTQTATLECLRETPIQLLDIEGITIKMEEPTEPVMPSADPTNTIDPLIKKSNVDGDSSDDDDDDVPLKQRRAAQSKFSMLHKCNKCDKAFKYVTNLFRHKQRDHSSHRPKEAEEKPNQAEPNSSSIEANSCADNLDNESVDNYYKCDHCDKSYKYIMLLIKHKHKAHVSSQISSQPRLIKDKTKESQRQHSKPSSTDSLVHSIIKEITIPDEDDADNSSADNYYKCDQCEKSYKYIVSLIKHKHNDHKAYKDSDEDEDEATSTRYATDTSAMSKPSRIDRRVKGFDLHRCKPNGSKEIQCMICLRRFIKLRELRDHLKSHPKDFAFDVHGEPIERIAEGFYKTAVESTAAGLKRRIFNDLKVGMYGRYYSITNEARYEMNLDSSDTDSDGEADVVERHSYSCELCDSPEAVFPRKYQLHEHHRQEHTWLEAPHVCQRCDARFLSAQLLDHHTLKLCQNTLKRFMCDKCPQRFFWRRNLRAHLADHKNKQETYPCDQCSRSFQDKSAVTKHKLMHHDGNNELLPCRWCTRTFYRPALLHKHVQRHGFSGEDLPLAETLLADAAKTSGPKSILCKLCDMQFISIGDLRRHISMQAHTEEAANYMISTEEGFELLLDETDESDDEAAGSSKTYRCALCDMNFQRRRDMCEHQYSLHTFDKLPYSCEHCIFKTVDKTMLAQHLRTQCLNQDKKFKCSRCGYKFMWHENLELHMSSQHSKSSNQAPVAIKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLNIHMRRHNGEKPFKCDLCDMSFTVHYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00567692;
90% Identity: iTF_00540521;
80% Identity: -