Basic Information

Gene Symbol
egg
Assembly
GCA_035045965.1
Location
JAWNOM010000084.1:918708-923191[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-14 6.5e-11 41.7 0.0 5 75 914 977 911 979 0.90

Sequence Information

Coding Sequence
ATGGAATCGGAGTCTGCAGCTGTAGACTGTTCAGAAAACGaagatgcagcagcagttgaccCTTCGATTGAGGCAACGGATTTGCCGGCTGGAAAGGCAAGCACAGCGATAGAAGCTGAGTTGGAGCAAGGGGAAAAGGCAGAAGGCGAAGAGAAAATGTCTTTGGATGAAGATGATCACGATGAGCCGTCGAAGGCGACCTCCGAATCTAAAGAATCGGAGAAGTCAGATGCTACTGAACAGGACAAGAACATCACAGAAATTACATCAGAAAAAACAGAAGAGTCATCAATTATGAAGCTTGATTCGACCAAACCGATTGAAACTGATTTGGATAGCAGCATTGAACTAATCAGTAGCCCAATTTCCGAGCAGTTGGAAGCCGCAGATAAAAATATCAAAGGCTCAACCGACGAAAGTGATGCAGTTAAGGAATGCGTTGGCTCTCTAATGGAATCTACGGATGCACCTAAGTCGACCGAAGATGACTTGGATAGCAGTATTGAATTAATTGAAAGTCCTGCATTAAAAGAACTATCTGAAACAGATAATATAAAGGACAGTAACTgcgatagcaacagcagcattgaACTGATTAGCAGTCCGAGGAATACGGAAGGTAGCAATGAGGAGGAAACTGGATCCAAAACGGACGATAAAATGAGTGTGAATAGTAATCCAGACAAAAATGACAAAGACACAGAAGAATGTGAAGATACGCAAATTGTCGCCGAGCACATCACAcaatcaaaaacaaacacagaaGATGCCACAATAGTAGGTGTTAAGTTGGATTCAGCTATGCCAACAAAAAGCACAACTGTAGAAGAAGAACCGATTGTACCCCAATCAATGTCAGAAGCTAAGGAACCGCAGCAACTCGATGAATCAAGCAAAGCACAACAGGAATCTATTCAAGATGAGCCCATGGAAACAGAGCCCAGCCAAGAAGTCGAAAGCAGCTGTTTAGTCAAGCTATACGAAGAAGATTATAAAGAAACTAAACCCGAGGGTGACTCTAAAGAATCCGTTGACTATGAGGAGGATAACGAAATCTACTACAAGAAGGATTGCCTCAACTGCAATTGCGAAAAGCTGCACAAACAATACGTGCGCGCTAGCTTGGCAGCTCTCAATTACTACAAGGTGCCTAGGAAGGCCCATAAGCGACAGTACATATGCATGGGTTGCTATGACACAGCCATGGACATGTATGAGGACTATGCGGGTCACTTAGTGGCCAAGCAACCGCTGCTGTTGCGTAGCTTCAACCAGAATCATGCGGACTTTGTGGCACTTGACAGTAGTgatgaggaggaggacgacgaTGAGCAGAGCAAGCCCGAGTTCTCAAAGAATGATTTGCAGCTAATTGAAAACGAGTTAGAGGATGCAATTAAAACTGTAATAAACAAAGTGGATTTGGATGACCAAATGGCTTGGTCGAAGAGCATACTTGAAGCAAAATCTCAACGCATAGGCCAAGAAATCGAGATGGTCAATGACGAGCTTTGCAAGTTGCAAAATATGGCAGACAAGATGCACTTTGCTCTGTACAGTTCATGTCAAGTGGTTCACAAGCATTTACCGCCACTTGACCTGTACCACAACATGAACGATTATGTGCAAGTGCCACCCGCTGGTGAGATAGAACGTCCACCCATTCAGCTGAACGAGACCTACTACGCTGTGAAGAACAAAGCGATTGCCAGTTGGGTGTCAGTCAAAGTGATTGAGTTCACGGAGAGTTCTACGGTGGGCGGCAATGTAGTTAAAAGCTATAAGATTAAATATCTGAATACACCATATCAAATGGTTAAAACTGTAACGGCCAAACATCTCGCCTACTTTGAACCGCCCCCAGTACGCCTAACTATAGGCACTCGTGTTATAGCCTACTTCAATGGCAGCACTTTGTCGCGTGGCAAAGAAAAAGGTTTCGTTCCCAGCGCATTCTATCCCGGCATCATAGCGGAACCCTTGAAGCAGGCCAATCGCTTTAGATATCTAATATTTTACGATGACGGCTACACACAGTATGTTCAGCATAACGATGTGCGTTTGGTTTGCATGGCGTCAGAAAAAGTGTGGGAGGATGTGCACCCAGGCTCACGTgactttatacaaaaatatgtggAGAAATATTCTGTGGATCGACCTATGGTGCAGTGCACCCGTGGCCAGAATATGAACACTGAATCCAATGGCACCTGGTTGTATGCGCGAGTGATTGACATTGATTGCAGTCTGGTGCAGATGCAGTTTGACGATGACAAGAATCATACTGAATGGATCTATCGTGGTTCTTTGCGTCTTGGTCCAGTCTTCAAGGAAACGCAGAACGCACTAAACAGCGCCAATGCCATGCAACAGCATCGTGTTCCACGCCGCACCGAGCCCTTTATACGATACACCAAGGAAATGGAGACAAGCAGCAGACAGGTTAACCAGCAAATGCGCGCCATCGCCCGGAAGAGCAGCTCCGCACCACAGAACGTAAATatgtcatcatcgtcatctgCTGCAGCGACTGCTTCcaatgctgcggctgctgcagctgcagccaggaATACTGTTCGACATTTGAACAACTCCACCATCTATGTGGATGACGAAAATCGGCCCAAGGGTCACGTCGTCTATTTCACCGCCAAACGAAATCTGCCACCTAAGATGTATACGCCACATGAATGTACGCCGGCCTGTCTGTTCAAGATCATTCATCGCCTGGATAGCTACAGTCCGTTGGCCAAGCCATTGCTCTCTGGTTGGGAACGTTTAGTATTTAAGCAGAAAGCCAAGCGAAATGTTGTCTATCGTGGCCCTTGTGGCAAGAGTTTTCGTAATCTGGCCGAAGTTCACAAATATTTGCGGGCCACCGATAATGTGCTAAACGTGGAAAACTTTGATTTCACTCCTGATCTACGTTGTCTGGCGGAGTACTCCATAGATCCCACTATTGTTAAAGAGGCAGACATTTCAAAGGGTCAAGAGAAAATGGCCATACCGCTCGTTAACTATTATGACAACACACTGCCACCACCATGTACTTATGCCAAACAGCGTATACCGACAGAAGGCGTGCATCTTAATCTCGACGAGGAGTTCCTGGTGGGTTGCGATTGTGAGGATGATTGCTCCGACAAATCAAAATGCGCCTGCTGGCAGCTGACTGTGGCGGGTGTCCGCTACTGCAATCCCAACAAGCCGATCGAAGAGATTGGCTATCAATACAAACGCCTGCACGAGCATGTGCCCACTGGAATTTATGAATGCAATTCGCGGtgtaaatgcaaaaagaaCTGCTTAAATCGTGTGGTCCAGCATTCGCTAGAAATGAAGTTGCAGGTATTCAAGACCTCGAATCGAGGTTGGGGTTTGCGCTGTGTCAACGATATACCGAAAGGtgcattcatttgcatttatgcCGGTCACTTGCTAACCGAAACTATGGCCAACGAAGGTGGCTTGGATGCCGGTGATGAGTATTTTGCCGATTTGGACTACATTGAGGTGGCCGAGCAGTTAAAAGAGGGCTACGAATCGGATGTTGAGCACTCAGCGgcggaagaggaagaagacaCTTATGTACCAGATCCTGAAGATGATGCGGATTTCATGCCCGCTAAGTATTATCAGCCACGCAAAAAGGATAAACTACGAGTCTCCCGCAGCCACTCCACCCAATCCACGGAGCAGGACTCACAGGAGAGGGCTGTGATTAACTTCAATCCGAATGCGGACCTGGATGAAACAGTGCGCGAGAATTCAGTGCGTCGACTCTTCGGCAGAGATGAGGCACCCTACATAATGGATGCGAAAACAACTGGCAATTTGGGGCGCTACTTTAATcATTCGTGTGCGCCAAATTTGTTTGTGCAGAACGTGTTCGTAGACACGCACGATCTACGTTTTCCCTGGGTGGCTTTCTTTTCGGCCAACCACATACGCTCCGGCACCGAATTGACTTGGAATTATAACTACGAGGTGGGCGTGGTACCTGGCAAAGTGCTTTATTGTCAATGCGGAGCAGCCAACTGTCGAATACGATTActttaa
Protein Sequence
MESESAAVDCSENEDAAAVDPSIEATDLPAGKASTAIEAELEQGEKAEGEEKMSLDEDDHDEPSKATSESKESEKSDATEQDKNITEITSEKTEESSIMKLDSTKPIETDLDSSIELISSPISEQLEAADKNIKGSTDESDAVKECVGSLMESTDAPKSTEDDLDSSIELIESPALKELSETDNIKDSNCDSNSSIELISSPRNTEGSNEEETGSKTDDKMSVNSNPDKNDKDTEECEDTQIVAEHITQSKTNTEDATIVGVKLDSAMPTKSTTVEEEPIVPQSMSEAKEPQQLDESSKAQQESIQDEPMETEPSQEVESSCLVKLYEEDYKETKPEGDSKESVDYEEDNEIYYKKDCLNCNCEKLHKQYVRASLAALNYYKVPRKAHKRQYICMGCYDTAMDMYEDYAGHLVAKQPLLLRSFNQNHADFVALDSSDEEEDDDEQSKPEFSKNDLQLIENELEDAIKTVINKVDLDDQMAWSKSILEAKSQRIGQEIEMVNDELCKLQNMADKMHFALYSSCQVVHKHLPPLDLYHNMNDYVQVPPAGEIERPPIQLNETYYAVKNKAIASWVSVKVIEFTESSTVGGNVVKSYKIKYLNTPYQMVKTVTAKHLAYFEPPPVRLTIGTRVIAYFNGSTLSRGKEKGFVPSAFYPGIIAEPLKQANRFRYLIFYDDGYTQYVQHNDVRLVCMASEKVWEDVHPGSRDFIQKYVEKYSVDRPMVQCTRGQNMNTESNGTWLYARVIDIDCSLVQMQFDDDKNHTEWIYRGSLRLGPVFKETQNALNSANAMQQHRVPRRTEPFIRYTKEMETSSRQVNQQMRAIARKSSSAPQNVNMSSSSSAAATASNAAAAAAAARNTVRHLNNSTIYVDDENRPKGHVVYFTAKRNLPPKMYTPHECTPACLFKIIHRLDSYSPLAKPLLSGWERLVFKQKAKRNVVYRGPCGKSFRNLAEVHKYLRATDNVLNVENFDFTPDLRCLAEYSIDPTIVKEADISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLNLDEEFLVGCDCEDDCSDKSKCACWQLTVAGVRYCNPNKPIEEIGYQYKRLHEHVPTGIYECNSRCKCKKNCLNRVVQHSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGGLDAGDEYFADLDYIEVAEQLKEGYESDVEHSAAEEEEDTYVPDPEDDADFMPAKYYQPRKKDKLRVSRSHSTQSTEQDSQERAVINFNPNADLDETVRENSVRRLFGRDEAPYIMDAKTTGNLGRYFNHSCAPNLFVQNVFVDTHDLRFPWVAFFSANHIRSGTELTWNYNYEVGVVPGKVLYCQCGAANCRIRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00516256;
90% Identity
iTF_00516256;
80% Identity
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