Dald015334.1
Basic Information
- Insect
- Drosophila aldrichi
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035045965.1
- Location
- JAWNOM010000516.1:678855-683453[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-80 4.8e-76 256.0 15.4 93 299 36 232 23 233 0.97 2 2 0.057 5.3e+02 -0.3 3.5 218 241 259 282 235 307 0.50
Sequence Information
- Coding Sequence
- ATGATGGACAATGACCCGAAGTCAACGACTTATTTGGTCAAAAGCCTGCGAATTATTGGTGGCTCCAAGTGGCGTGCTAGACCTGTGCGAGAGGAACAAGGACATTTGgAAGTCGAAGAACGTTTTCGAAAAGCTATGATAACGAATGCCCAACTTGACAACGACCGTTCATCACAAACCTATGAGGTTAAACTACTAAAGGATAAAAGTGAAGCAATGCAAGAATCTCTTGCTCAATTGCAAcgtgaatttaaaaataaacttcgCGATTGCAGTGCCCTGAAGCGCAGCCTAGATCGCACAACCCTCGAATTAAACCTGGTGCAAGGTCAGTTAAGTGAGCGTGATGCCCTAATAGAAGAACACggtcttgttattgttgctattgaaaATAGTGATGGCAGCGATGCGAAGCGTGCTCTAGTCACCGTTGAAAACGCCAATATATTGGCAACTGTGCAGGGTTCTCTTGacGTACGAATTAAAAAGTTTACTGATGAAAAACAACGCCTTcttaatgaaatgcaaaagctCCGTGAACAGCTGGACGCTCTTAAAGATGAAGGAAGACCAGGTCGGAGCAGTCTAATAAAGGACTCTTTAGGGTACGATGATGACTATGATACTCAGAGagaatcaaataaaatcatatccgactataaatataaactacaGAAAGCTGAACAGGAAATTGCCAGTCTGCAGGCTAATCTAGCGCGCTCCGAGACTCAAGTTATACGTTACAAAAGTACGGCTGAAGCTGCCGAAAAATCTGAGGCTGAACTTAAAGTAGAAAGACGTAAGCTGCAACGTGAGCACCGAGAGATTTTGGAGCGATTGGAGGAAGCAGAAACTGCTAATAATCATTTACTTAAACGTCTTGACAAacttaaaaatgcaaaaagcacAATATTGAAGGACTTATGA
- Protein Sequence
- MMDNDPKSTTYLVKSLRIIGGSKWRARPVREEQGHLEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSEAMQESLAQLQREFKNKLRDCSALKRSLDRTTLELNLVQGQLSERDALIEEHGLVIVAIENSDGSDAKRALVTVENANILATVQGSLDVRIKKFTDEKQRLLNEMQKLREQLDALKDEGRPGRSSLIKDSLGYDDDYDTQRESNKIISDYKYKLQKAEQEIASLQANLARSETQVIRYKSTAEAAEKSEAELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802834;
- 90% Identity
- iTF_00473054;
- 80% Identity
- iTF_00473054;