Basic Information

Gene Symbol
-
Assembly
GCA_035045965.1
Location
JAWNOM010000521.1:290502-291528[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9 5.9e+03 -2.2 0.0 14 43 33 65 25 83 0.61
2 2 8.3e-11 1.7e-07 31.6 0.0 10 89 140 209 136 209 0.81

Sequence Information

Coding Sequence
ATGAACAATCCGCGAGATCATCTGCATTGCAGCAGAAGAGGCTGCACCTACACCACGAATAGAGCATACAACTTGGAACGCCACGAACGGAACCATGATAAGGGAAAAGTGCCAATATCGCAGTGCCAGCCATGTCCGCACTGCACATATGCCGCTGGATCTCTGCACAATTTGATGCGTCACATAAGTAAGAAGCATACAGGATCTATTGTCAAGACACAGCAACAAGTGATAACCACTCAACCTGCGCCACCACCCCTAACACGCGCTGAGAAACAGAATGAGCGGACTACCACACAGAAGTCCATGTCAAATGTGACACCATGTCCCGAGCTGAAGCAGACTGTGAAACAGTCAGTGGAAGAACCGGAAGTGGATACGTCACTTTGGCTGTGGACGACGCCGCAGCAACAGgaaaagaattttataaaacgCAGTGGGCTCAAAGGCGAGTGTAAAATATTAGAGCGTAGCGTCAATCTGTTCAAaTTATACGCATTGGTTCAAGCGCGTGGCGGAGCTCTTGATGTGGACGAATGGGATGATGTTGCAGCAGCATTGAGTCTACCTCCTGGATCTGGGTGCAATGTTGGTGTCAAATATATGGAGGTGTTGTTCGAATTCgagaagaaagaggaagaacGCTTACAGGAATGTCAAATTGTGCCGGGCGTGCCGCCTTGGTGGGACGATGGCGATTTGATCACCGACGATTTGTGCTATGCATCCGAGGGCAGAGTGTTAGGCCATTGGTGGAAAGATATGAATCGACCATTTGTAACTGTACAAAAtgctattattaaattgatttacgaTAAGTATTATAGTAATCACTTAGGCAACAGCAAACCGTTTCAGCGGTTCTGCGTAAAAGACTCTTGGCTGCGAGCCACAATGTTAAATTATCAAGAGTTAAATTATCAACTACATCTCACACATAGTTCTGCTTCATGA
Protein Sequence
MNNPRDHLHCSRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTGSIVKTQQQVITTQPAPPPLTRAEKQNERTTTQKSMSNVTPCPELKQTVKQSVEEPEVDTSLWLWTTPQQQEKNFIKRSGLKGECKILERSVNLFKLYALVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEERLQECQIVPGVPPWWDDGDLITDDLCYASEGRVLGHWWKDMNRPFVTVQNAIIKLIYDKYYSNHLGNSKPFQRFCVKDSWLRATMLNYQELNYQLHLTHSSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544255;
80% Identity
-