Basic Information

Gene Symbol
-
Assembly
GCA_035047565.1
Location
JAWNPK010000040.1:2210520-2211550[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1 6.7e+03 -2.3 0.0 13 43 32 65 25 80 0.60
2 2 8.3e-11 1.8e-07 31.6 0.0 10 89 140 209 136 209 0.81

Sequence Information

Coding Sequence
ATGAACAATCCGCGAGATCATCTGCATTGCAGCAGAAGAGGCTGCACCTACACCACGAACAGAGCATACAACTTGGAACGCCACGAACGGAACCATGATAAGGGAAAGGTGCCAATATCGCAGTGCCAGCCGTGTCCGCACTGCACATATGCCGCTGGATCTCTGCACAATTTGATGCGTCACATAAGTAAGAAGCATACAGGATCTATTGTCAAGACACAGCAACAAGTGATAACCACACAACCAGCGCCACCACTACTAACACCCGCTGAGAAACACAATGAGCGCACTGTTACACAGAAGCCCATATCAAATGTGACACCAAGTCCCGAGCCGAAGCAGAGTGTGAAACAGTCAGTGAACGAACCAGAAGTGGATGCGTCGCTTTGGCTTTGGACGACGCCGCAGCAACAGGAAAAGAATTTCATAAAACGCAGTGGCCTCAAAGGCGAATGCAAGATATTAGAGCGTAGCGTCAATCTGTTCAAATTATACGCATTGGTTCAAGCGCGTGGCGGAGCTCTTGATGTGGACGAATGGGATGATGTTGCAGCAGCATTGAGTCTACCTCCTGGATCTGGGTGCAATGTTGGTGTCAAGTATATGGAGGTGTTGTTCGAATTCGAGAAGAAAGAGGAAGAACGTTTACAGGAATGCCAAATTGTGCCAGGTGTGCCGCCTTGGTGGGACGACGGCGATTTGATCAGCGACGATTTGTGTTGTGCATCCGAGGGCAGAGTGTTGGGCCATTGGTGGAAAGATATGAATAGACCTTTTATAACTGTACAAAAtgctattattaaattaatttacgaTAAGTATTATAGTACTCActtaagcaacagcaaaccgTTTCAACGGTTCTGCGTAAAAGACTCTTGGCTGCGAGCCACAATGTTGAATTATCAAGAGCTAAAGTATCAACTACATCTTACACATAGTTCTGTTTCGTGa
Protein Sequence
MNNPRDHLHCSRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTGSIVKTQQQVITTQPAPPLLTPAEKHNERTVTQKPISNVTPSPEPKQSVKQSVNEPEVDASLWLWTTPQQQEKNFIKRSGLKGECKILERSVNLFKLYALVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEERLQECQIVPGVPPWWDDGDLISDDLCCASEGRVLGHWWKDMNRPFITVQNAIIKLIYDKYYSTHLSNSKPFQRFCVKDSWLRATMLNYQELKYQLHLTHSSVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544255;
90% Identity
iTF_00472849;
80% Identity
-