Basic Information

Gene Symbol
-
Assembly
GCA_018153725.1
Location
JAECYD010000275.1:42622-43642[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7 4.3e+03 -1.8 0.0 23 46 45 69 25 104 0.61
2 2 6.4e-11 1.7e-07 31.6 0.0 10 89 139 208 135 208 0.81

Sequence Information

Coding Sequence
ATGAACAATCCGCGAGATCATTTGCATTGCAGCAGAAGAGGCTGTACCTACACTACGAATAGAGCATATAACTTGGAACGTCACGAACGGAACCATGATAAGGGGAAGGTGCCAATATCGCAGTGCCAGCCATGTCCGCACTGCACATATGCCGCTGGATCTCTGCACAACTTGATGCGTCACATAAGTAAGAAGCATACAGGATCTGTCAAGACACAGCTACAAGTGATAACCACTCAACCAGCGCAGTCACCACTAACACTCGCTGAGAAACAGAATGAACAGAATGTCACACAGACGCTCATGTCAAATGTGACATCAAGTCCCGAGCCGAAGCAGACTGTGAAACAGTCAGTGGAAGAACCGGAAGTGGATGCGTCGCTTTGGCTTTGGACGACGCCGCAGCAACAAGAAAAGAATTTTATTAAACGTAGTGGCCTCAAAGGCGAATGCAAGATATTAGAGCGTAGCGTCAATCTGTTTAAATTATACGCATTGGTTCAAGCGCGAGGCGGAGCTCTTGATGTGGACGAATGGGATGATGTTGCAGCAGCATTGAGTCTGCCTCCTGGATCCGGCTGCAATGTTGGTGTTAAATATATGGAGGTGTTGTTCGAATTTGAGAAGAAAGAGGAAGAACGCTTACAGGAATGCCAAATTGTGCCGGGTGTGCCGCCTTGGTGGGACGACGGCGATTTGATTAGCGACGATGTGTGTTGCGCATCCGAAGGCAAAGTGTTAGGCCATTGGTGGAAAGATATGAATCGACCTTTTATAACTGTACAAAATGCTATTATTAAATTGATTTACGATAAGTATTATAGTAATCACTTAAGCAACAGCAAACCGTTTCAACGGTTTTGCGTAAAAGACTCTTGGCTGCGAGCCACAATGTTGAATTATCAAGAGCTAAAGTATCAACTACATCTCAGACATAGTTCTGCTTCGTGA
Protein Sequence
MNNPRDHLHCSRRGCTYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTGSVKTQLQVITTQPAQSPLTLAEKQNEQNVTQTLMSNVTSSPEPKQTVKQSVEEPEVDASLWLWTTPQQQEKNFIKRSGLKGECKILERSVNLFKLYALVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEERLQECQIVPGVPPWWDDGDLISDDVCCASEGKVLGHWWKDMNRPFITVQNAIIKLIYDKYYSNHLSNSKPFQRFCVKDSWLRATMLNYQELKYQLHLRHSSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544255;
90% Identity
iTF_00472849;
80% Identity
-