Dalb008069.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila albomicans
Gene Symbol
-
Assembly
GCA_009650485.1
Location
NC:14350543-14361750[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.061 3.7 7.8 0.2 1 23 1387 1410 1387 1410 0.94
2 13 6.9 4.1e+02 1.3 0.2 1 23 1571 1593 1571 1593 0.91
3 13 0.00015 0.0092 16.0 2.7 2 23 1596 1617 1596 1617 0.97
4 13 5.9e-05 0.0036 17.3 0.2 3 23 1625 1645 1623 1645 0.98
5 13 4.9e-07 3e-05 23.8 4.1 2 23 1652 1673 1651 1673 0.97
6 13 4.7 2.8e+02 1.9 0.4 5 23 1686 1704 1684 1704 0.96
7 13 1.2 70 3.8 5.4 3 23 1711 1732 1709 1732 0.93
8 13 0.12 7.4 6.8 0.2 2 23 1743 1763 1742 1763 0.96
9 13 4.7e-05 0.0028 17.6 0.4 1 19 1769 1787 1769 1791 0.95
10 13 2.2e-05 0.0013 18.6 1.4 1 23 1799 1821 1799 1821 0.98
11 13 8.9e-05 0.0053 16.7 7.6 1 23 1827 1849 1827 1850 0.96
12 13 0.00022 0.013 15.5 6.1 1 23 1855 1877 1855 1877 0.98
13 13 0.024 1.5 9.1 8.2 1 23 1883 1905 1883 1906 0.95

Sequence Information

Coding Sequence
atggtGGACAACAGCGTGCAGTGTCCCGTGTGCACTTTGTACCTGCATGCGGGCATGAATCTCTCGGATCATTTGGAGACACATCCCAAGGAGCAGGTGATCAAGGCATTAGTGCAAATGACAATCGTTGGCAACAGCCCAATGGGCAGTACtctggcagcggcagctgcacTCGCCACTGCCGGCAgtggtggcagcagcagcagcaataccagtcagcagcagcagcagactgCGGTGGCATCGTCAGACGGTTCCGCCTCCTCGGCAGCGCTCGATGCTGATGTGAAACCAGCTGTGGCACCAATAGCAGCAGCTCCAGTGCCACCAACAGCTGTAGTAGCAGtagcaccaacaacagcagcacctgCATTGCAATCTGcgacagcagcatcaacagcattAAAATCAACAGCACCAAAAGCTGCGTCATTACTGGCAAATGCAATGGCCAgtagcagcagtagcaacggCTCCTctagcagcaacagtaacaataacaaattgagCAATCCACCGATTAAGGCAGTCAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACATCCAGCAACACACCCACCATAAACAGCGTGGCCGCCGCCTATCCGCCATCGTTGACTTCTGATTATCGCTACgatcagcaacatcagcagcagcaaccacaacaacaacagccccaacagcagcaacatcaacagacgacgccaacagcaacacttcATGGGTTTCCACGTGGTGCAACCACAATGTTGGTGATACCGCAGGCTGCAGCACAGCACCAGCATCACTTCCTGGCCACGCAGCCCGCACATTTtgcgcatcagcagcagcaacagcagtcacCTATGAAGTACACGTATGCAACCACCACGCTGCCACCGCCCCCACCACCGCTACAGCTTTTTGCACAGCAGCCGACAACGTCACAGTCGCATCAGAAGCCACCGCCCGCTTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAAccaaaacaagcaacaacaacaactccagcagcatcaacagcaaccgcagcagcagcaacagcaacatctaAGCGTACAACATAATGTAAACCTAGCACCACCGAGTGGGAAGCACAGCAAAACCCACACGGAGATCTTTCTGAATCCtccgccaccaccaccgccacaGTCCGCAACGATGCCGTCTTCATCGTCGAGCTCCTGCGCCTCCTCCAGACTGCAACATccacaacagcatcaacatcaacaccaGCAATCACTTCAAATTGGGAATAGCAGTATTGTGGCTATCAACTGCTCCAGCGTCGCATCGAACCTAATGCCAACATCGTCCAGTGGACGAGGCAGCAGTCGCCAATCGACCAATTCGCCATTTGGTGCACTGCTTAATGCAGCAGCGCAAGCTGCCAGCTCATCGCCCGCCTCCTCCAGCGCTTCGGTGCTGCGTTACGCTGAATCGCCGGTTGCTCACTATTTGGAACGAGAGAATGGTGATTTTATTGTGCAGGAGACGCCCAAACACATTGTCGAATGCGTCGAGAAAGATGACGGCGAGTTTTCAGTAATTGAGAGGATATATCAGTCGCCACCCAGCGTCTTGCACAtacacgatgatgatgaagaagagGAGGATCAGAGCTGGGCAAACAGCGAGGATGACGACGTCAAGGTGGCGCATAATCATGTCGAGGATGGCGACGATGAACGTGAGGACAGTCGCAGCCGAGTTGGTGGCATTAAAACGACAACGAGAAAGtcacgcaaaacaaaaaccggcAACAGAATCCACAAACGTGCGTCTAAACATCAGTTGGCTGCCGAAGAGGAGGAAGAGTTCATGAGCGTCGGCAGCAGTGAGAATGAAGagctggaggaggaggatcagcagcaacaccacCACCACCTTCATCAGCAATCGCCAACTTCAGCTGCTGCGCAGGTGGCGTTATCTTCGCCTCCGCAGCTTTGCACGGCCCCATCGACTAGCAGCGGAACCTCTTCAGGGTCCTCCGGCATTGTCAATTCTACATCCAGCGGCACCGTAAAGTCCAAAAAGAATCGTGTTACTGTGCTAAGCGATGTGCCGCTCAATATGAACGAATATTTGGATCTAGTAGGCAATATTGTGGCTTCAAGTCGCATCGGTGCCTCGCGTCCATTTGTCGCTGTTGCGCCCCTCCCGCTGGTCAAGGTGGAAAAGGAGGAGCCGCTGGATGACTACGACAGTGTTCCGAGTGAGATACAAGCGATGGAACAGAAGCCCAGCTTGGAAAATGCCGCtggcagcagtagcagcagcaacagcagtagcaacaatgGACATGGCACCACCAGCGTCATACGCATGGCGAGCACAagcaccagcagcagtagTAGCAATGTTCCGGCCGATGATCTCACACAGCCGCCGCCAATGAAAGTTGAGGTGGAGCCAACGATGCTGTTGCCGCAACGTTTCTCGGCACCGGCACAGCAGCGTGGTCCCAAAAAGTTAGTCATCAAACCAAAGGccacaacaacggcaacggcgaccACAACGTTGGCGGCAgctgcgacggcgacagcgacgaaAAAGACTGATAACAATAACGCtgccggcagcagcagcagcagaagtagcAACTGCGTCGAATCTCTCAGCATATCAAAAACATCGGCGGAATTGGTACAGATCAAGAGCGAGACTGTGGAACAACCATCTACATCGAGTGGTGGCAGCATCTTAGAGAAACATCTGACCACCAGCTACAGTGGGCAACAATCACGCAAACACTCCGCAGTCAACGATGACGATGCACGCGTCCTTCTCGAGTTTGCCAACTCAAAACAGTTACCCTTAGCGAGTGGCAGCAATCCCACCACATTCGTGGTGAATGCAGCAAGCTTTGCGTCGGCCGGATCTGTGTTTGCCAGCAACacgcagcagccgcagcagaaGCCCGGTGAAGAATACATACTGCCTGATGACAACAAAGTGGAAGTGGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCCTCCTCcactcaacagcagcagcaacaacaacatcaacagcatcacCAGCAACCGCATCATCAACACGCAGCTGCGACAGTGCAGGCAGCGCATTCGACATTGCAGCAGACACAGCCAccaaattttaatgatttcaaCTTTCTGTACCACCAAAatgcaacaccaacaacggCAGCGACTTCCTCCAGCTTTGTACCCTTTGgtctgcagcaacagcaacatcagcagccaCCACATGGCTCCAGTGATGCGACCAATGCAGCAACGCTCGCCTCATCCTCCAGTAACTCATCAGCAATGGATCACGACTCGTCCATGAATGCATCGTTCCGCGTGGCCAAAACACAATCATCGCTAAATGGCTGGTatcaaccacagcagcaacagcaaccggcgcaccatcatcatcaccagcagcagcatcaacagcagcaaccacagccaACAACATCTCAGAATGTGGAGCAGTCAAGCAATTTTATTGCTGCTTTGGCGGCTGTTGATTGTTGCAGTGTGGCGATGGACAGTGATGCGAGCGATGCAAAGTATTTGGATCTGGACACATGTAAGCGGGAACAGTTAAGCAATAGCAACAGTCACTTGCCCTCTGCCTCAGCATCCACATCGACAACATCATCTTCATTTGCGGCTGCTGCCACAGAGAGCAGCCTTGTTGGTGGATTGGGTTTGAATATACGCACGGATGAGAAGATGCCTGCGAAAGGAGAAATTTCCGAGCAGGAGAGCAATTGCGACATTGAGAACTCTTGGAGTCAATCGATGTATGGTGACATATCACAGCGGTACTTTAGAAGCCAATTTGCGGATGGTTACAATCAACAACTGACCGATTGGCGTCAGGACTTTTATCCTGCGCAGGATCTCagtggccaacaacagcagcgtgaACAGAAAAGATTTGATTTCAATGCGGTGGCATCCGAGTATGCGCAGCCGGATGAGCTGGACGCTTCCTCGAGCTCGGCACGAAGTAATCATTTGCTGGATGCACACCCCACTACCTCGACGTCATCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCGACATCTAGAGCTGCCGCCGAGGCAGAGGCAGTTGCAGCCGCCCTGCAGCGGAAGGGTCAACGTCGCAAGATCTACAGATGTCCACACTGTGTGGCAATCTTCGAGAAGCTCAAGGAACGCAACGCCCATATGATTGGAGAGCACAACTATGTCCGGCAGAACCGTCGACTCATCTGCACTCAGGCCATGGTCAATGGTGCTATGCTGGCACAGCCCCAGGCTGAACACCAAGAGCaagcccagcagcagcaactgttgctgcagccAGGTGGCAGCGATGCTCTTCACGAAGATTCGAAGGATGGTATTGTAAAGATTAAGCAGGAGCACTGTCAGGACAAACCTGATTCAACTGACCAGCAGATGCTTGATCAATTGGAAATGCCCGATGTTAAAGATGCCGGTCTATTAGGTGTTAATAGTGAGAACGCTCGCGATGCGGACGTAAAGCCTTCCACGACCGTAACAGATCTGAAGCCGACTATGCCACCGCTGAGTATGACAACACCAGCTGCCAAATTGGCAGCTATTTATCGCATGCTTATTTCCTACAATGAGTCGAAGCTTGGGCAGGACCATCATAACCTCAGCGAGCTGGAACAAAAGGCCATGGAGAAATCCATATTTCTATGCTACGTGTGCCGCACCGACTTCCCCTCGGTGAAGCTGTACGATGCCCACTTAACTGAGCATCCCGCCGAATGCTTTACGTGTGGGAAAAAATTCTATCGTTGGAAGAATTTCTCACTGCATCTGAAGCGTCATCTGGGCTGGAAGGAATTCGGTTGCTATGTCTGCGATAAGAAATTTGTGGTGCGCAGTGCTCTTGTGGAGCATATGCGCATGCATACCGGCCAAACTCCCTTGAAGTGCAAAATATGCGGCAAAAAGTTCAAACGTTATTCCAACTTGACTCAACATCGAAAGCGTCATACCAAAATGACAGTAAGGAAAAAGGAATATGTGTGTCATTGTGGCGAGGTCTTGCCATCAAAGGCACGCTTCTTGTGGCATAAAGAAACGCACGACTTGAAACCAAAATGCTGTCCGTATTGCTGTGATCGTTTTGTGCACGCCAATTCATTGCGTCGTCACATTCGGCTAGCCCATTCAGACAAATTTGATTATGCTGAGCCCATGGAATGCCCCATgtgcaaacaaatatttgcgaaAACGTCCATTAAGGCACACATGGCAACGCACTCAACGGATCCACAATACGATTGCGCCATCTGCAATAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCACGCCAATCGCACTGCCAAGCCGTTCAAGTGCGAGCACTGCCCCAAGGCCTTTGTACGCGAACTGGACTTTAAAAATCACATGAATGCGCACAAACAGATCAAGCCCTACACATGTGAGTATTGTGGTTGTAAGTTCATACGGAAATACAATTATATGAGGCATCGGCGAGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGACTTTCCATAGGCACTACTATTTGATAGAGCATCGACGAATTCACACGGGTGAGCGTCCTTTCCATTGCACCATCTGCGGTAAAAGCTCCACAACGAAGACCAATCACAATAAGCATCTGAAGATACATCATTCGCGAGATCCCTTTACCGTGGAGGTCTAA
Protein Sequence
MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNSPMGSTLAAAAALATAGSGGSSSSNTSQQQQQTAVASSDGSASSAALDADVKPAVAPIAAAPVPPTAVVAVAPTTAAPALQSATAASTALKSTAPKAASLLANAMASSSSSNGSSSSNSNNNKLSNPPIKAVKSAPPSTEASATTSSNTPTINSVAAAYPPSLTSDYRYDQQHQQQQPQQQQPQQQQHQQTTPTATLHGFPRGATTMLVIPQAAAQHQHHFLATQPAHFAHQQQQQQSPMKYTYATTTLPPPPPPLQLFAQQPTTSQSHQKPPPAYGAAISQIRSQHNQNKQQQQLQQHQQQPQQQQQQHLSVQHNVNLAPPSGKHSKTHTEIFLNPPPPPPPQSATMPSSSSSSCASSRLQHPQQHQHQHQQSLQIGNSSIVAINCSSVASNLMPTSSSGRGSSRQSTNSPFGALLNAAAQAASSSPASSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEDQSWANSEDDDVKVAHNHVEDGDDEREDSRSRVGGIKTTTRKSRKTKTGNRIHKRASKHQLAAEEEEEFMSVGSSENEELEEEDQQQHHHHLHQQSPTSAAAQVALSSPPQLCTAPSTSSGTSSGSSGIVNSTSSGTVKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGASRPFVAVAPLPLVKVEKEEPLDDYDSVPSEIQAMEQKPSLENAAGSSSSSNSSSNNGHGTTSVIRMASTSTSSSSSNVPADDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATTTATATTTLAAAATATATKKTDNNNAAGSSSSRSSNCVESLSISKTSAELVQIKSETVEQPSTSSGGSILEKHLTTSYSGQQSRKHSAVNDDDARVLLEFANSKQLPLASGSNPTTFVVNAASFASAGSVFASNTQQPQQKPGEEYILPDDNKVEVDEIVISSSSSFASSTQQQQQQQHQQHHQQPHHQHAAATVQAAHSTLQQTQPPNFNDFNFLYHQNATPTTAATSSSFVPFGLQQQQHQQPPHGSSDATNAATLASSSSNSSAMDHDSSMNASFRVAKTQSSLNGWYQPQQQQQPAHHHHHQQQHQQQQPQPTTSQNVEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDTCKREQLSNSNSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRSQFADGYNQQLTDWRQDFYPAQDLSGQQQQREQKRFDFNAVASEYAQPDELDASSSSARSNHLLDAHPTTSTSSSALLAGPPIASTSRAAAEAEAVAAALQRKGQRRKIYRCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQAMVNGAMLAQPQAEHQEQAQQQQLLLQPGGSDALHEDSKDGIVKIKQEHCQDKPDSTDQQMLDQLEMPDVKDAGLLGVNSENARDADVKPSTTVTDLKPTMPPLSMTTPAAKLAAIYRMLISYNESKLGQDHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKTFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00537699;
90% Identity
iTF_00562674;
80% Identity
-