Basic Information

Insect: Drosophila acutilabella
Gene Symbol: -
Assembly: GCA_035046005.1
Location: JAWNOK010000024.1:10526862-10530579[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8 6.2e+02 1.4 0.0 1 23 361 386 361 386 0.90

2 17 0.13 10 7.0 4.2 3 23 398 418 397 418 0.93

3 17 5.8 4.5e+02 1.9 3.0 2 17 429 444 428 455 0.75

4 17 0.33 26 5.8 1.6 3 19 488 504 486 508 0.87

5 17 0.0013 0.098 13.4 0.8 1 23 516 539 516 539 0.98

6 17 0.0006 0.047 14.4 0.3 2 23 544 565 543 565 0.97

7 17 6.5 5.1e+02 1.7 0.4 1 19 573 591 573 593 0.85

8 17 0.0022 0.17 12.6 2.3 1 22 613 634 613 637 0.90

9 17 0.032 2.5 9.0 0.7 3 21 644 662 644 663 0.90

10 17 0.015 1.1 10.0 0.6 1 23 682 707 682 707 0.96

11 17 0.039 3 8.7 1.6 2 23 722 744 721 744 0.93

12 17 0.024 1.9 9.3 0.8 2 23 750 772 749 772 0.93

13 17 0.024 1.9 9.3 0.2 2 23 776 798 775 798 0.96

14 17 0.00015 0.011 16.3 0.9 1 23 804 826 804 826 0.98

15 17 0.0067 0.52 11.1 0.5 1 23 830 853 830 853 0.93

16 17 0.00011 0.0082 16.8 0.9 1 23 859 882 859 882 0.97

17 17 0.0015 0.12 13.1 0.5 5 23 895 914 887 914 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8	6.2e+02	1.4	0.0	1	23	361	386	361	386	0.90
2	17	0.13	10	7.0	4.2	3	23	398	418	397	418	0.93
3	17	5.8	4.5e+02	1.9	3.0	2	17	429	444	428	455	0.75
4	17	0.33	26	5.8	1.6	3	19	488	504	486	508	0.87
5	17	0.0013	0.098	13.4	0.8	1	23	516	539	516	539	0.98
6	17	0.0006	0.047	14.4	0.3	2	23	544	565	543	565	0.97
7	17	6.5	5.1e+02	1.7	0.4	1	19	573	591	573	593	0.85
8	17	0.0022	0.17	12.6	2.3	1	22	613	634	613	637	0.90
9	17	0.032	2.5	9.0	0.7	3	21	644	662	644	663	0.90
10	17	0.015	1.1	10.0	0.6	1	23	682	707	682	707	0.96
11	17	0.039	3	8.7	1.6	2	23	722	744	721	744	0.93
12	17	0.024	1.9	9.3	0.8	2	23	750	772	749	772	0.93
13	17	0.024	1.9	9.3	0.2	2	23	776	798	775	798	0.96
14	17	0.00015	0.011	16.3	0.9	1	23	804	826	804	826	0.98
15	17	0.0067	0.52	11.1	0.5	1	23	830	853	830	853	0.93
16	17	0.00011	0.0082	16.8	0.9	1	23	859	882	859	882	0.97
17	17	0.0015	0.12	13.1	0.5	5	23	895	914	887	914	0.92

Sequence Information

Coding Sequence: ATGTCGGAAAATGCTAAAACTAAAAACGATAGTGAGCGTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAGCAACAATTTCAAGAGATATTCGATGAAGTGGGAATTGACATCGAATTACCCGATTTGCTGGCCAAATATTTTCACATCAATGTCAAACCCGATCCACAAAAACAGCAATTACTGTGTCAAGAGTGTGTGAAGACTTTAATTCGTTTCTTTGACATTGATGAACTGCAGCGGGAACAGGATGCGGCAAATGCGGCCAAAAAACAGGCTAAACAGCCTGAGGGAACACCTAAAGCTACCAACGAAACCGCCAAGAAGGAAACAAAAGgcgttaaaaaacaaatatcgcCAGCAAATAAAGCCAAAACTGAACCCAAAAAGATGCCCGTTGCTGTAAAATTAGCCGCCAAACCGAAGCCAGCCAAGGTGGTAGCCACTGTTGAGCCAGCCTCCATACGCGTTACCCGTGCTAAGTCCGTAGCTGTGACACCCAAGGCCAAGCCCAAACCAATTGAAAAGTCCAGTGTCAAAACGGTGGGCAGAAAAAGCAGGTCCAAAGAAGCCGGCTCTGGGGAACAGGAGCAGATTAGCGAGCTGTTGCGTGACATACTGGACGATGAAAAGGCGGCCAGCGATGACAAGTTCGCAGAGGCGGCGGCCACAGTGCGGCAGCTGGAAACACAAGCGGTGCAGGAAGAGGAGCAGCAggagcggcagcaacaacagcagcaggacaATTGCGATGAGTTGGAGTTTCTCCTTGAGCAAGAAGATGCCTCCTCGGACATGGATGTGCAGCACTTCAAGGTGGAGAACTATGCCTTAGTGGACTCTTCTCAATCACAAACCGAGGATGAATCCGTAAAGGTTGAGCCGTTTAACTTTGTGCTGATCAAGGAATCTGATGATATTGCCGATCTTTATGAATATCTGTCCACGGTGGTGAGAACATGCTTTGAGACGCTGACTTTTGAATGGTCCACCGTCTGTTGCCACTGCTCGCTGAAGTGTCAGCAATTCGAGAGCCTGCTGGGACACATGCACAAGTGCCATCAGCTGCCCGAGGAGCGTTTCAAGTGTCCCATTGCGAACTGCAATGCAGAGTTGCAGGGCAGTAAATACCTGGCCATGCATTTGGTGGTGTTGCATGCACCAGTGGCAGACATACCCATTTACGGCTGCTGTCCCGAGTGCAACATGACCTTCTCCAACATATTGCAGTACAATAAACACTCTTGCGCCCATGTGATCAAGAAGCGGCGCGGCATTCGTTTGTACTGCGAAATGTGCGGCTTGGAGTTTCCTTCCTGGAAGCGCTTTAATTTCCATAATCAGTTTCATTTGGAGCGGCACAGACCACGCGCTTGCTTTGTGTGCAACTATGCTGACAATAACATTGATAATCTCTTCCAGCATTTGCATTACTCACACGAGCCCGAGGGTACGCTCTTCTGCGACATCTGTGACCGCAACTTCCGGGATGCGACTGTCTTTGCGGAGCACAACAAATGCCACTCGAATGTCACCAGCACCACCTACACCTGCACCACCTGCAGCGCTAACTTTGATACCCGTGGACGTCTCAATGGCCACATTCGCACGCGACATGGTTCCATTATAAGCTGTGAGCTGTGCAGTCGGGAATTTGCCACCGAAGCCACCTACAATATACACATGAAGAAGCATCTGATCATTGAGCGCGAGATTCATTACTGTAGCAATTGTGGGCAACTGAGCGAGAATCACGACAAGATGTTGGCCCATGTGGAAGATGCCTCAACGGACTGTTTCAATGTGGAGATCCATGTGGAACTCGTACGGGATGCCTATGTTTGTGAATATTGTTCGTGTTACTTTCGGCAGAAAACAGATTTGCGTGATCATCGGGATTCCGGAGTGCATAAGGACAATCTGTTCTGGTGTCAGCCGTGTGGCAAGGCATTTAGCGACATGAAACTATATCGTCATCACTTACGCAACTATCAGCAACAACGCGCTGATGTGGAGCATCGCAAACTCGAGGTTTGCCTTTACTTTATGTGCGACTACGAGGACTGTTTTGAGGCGTACATCAATTGGAACTCCTTGTATACGCACAAGCGACGCACGCACGATGGCATTGAGAAGCAGGAAGGTGCCAAGCCCAACGAATGGATCTGTCAGTTCTGTCAAAAGGAATGCCGCTCAAAAATGTCGCTATCGGTGCATGTGGCACGCAGTCACAACAACAATAATGTCACTTGTTCGATCTGCAAGTCTTCCTACAAAGACGATGAGGCACTTAAAAAGCATCATGCCTATTGGCATGAGCCCATGGAGTGTGCGCTGTGCCTAAAAGTGGTCAAGAGTCGTCGCAACTTTGACACACACATGAATGTGGTGCACTCAAACAATAAGCGTTACACTTGCAGTGTCTGCGAAAAGGGTTTCTTCTACAAGAGCGAAATGGAGGCACACAAGCGACTACATACACAACTGTTTGAGTGCGATCAGTGCACCTTCACCACACGCAACAAGAAATCGCTGGCGGTGCATGTGTTGGGACAACATTACAAGCGGTTTGCCTTTGAGTGCAAGACGTGCAACAAGCGCTTTGGTCGTCGTCAGGGTCTAATCAGTCATGTGCAGCGCATACATGGCTCTAATAATACGTGCCGTGATTACTTTGAGAATGGTTGCAGCAAATCATTCAGCACAACGGCCAAATTGAATGTGCACGTGCGCAAAGCACACAATGGCAGCATCTTTCTGACGGATTTGGATGACGATGAGCAGCTGGAAGAAGAGCAGGAGCTGCAACTGGAGGAGCAGGATGAGGAACAAGCAGAGGAGGAACAGCAAGAGGATGAACAGCCTGAGGATGAACAACCAGAGGAGGAACAACCAGAGGAGGAACAACCGGAGCCAAAGTCACAGAAACCTAAAGCAAAGCGTCTGGCTTCTCCAGGAGCAACCACATCCAAGAAACGCTGCGTGCGTCTTGGCAATGAAACGCAAGTCGAGTTGATTCCAGGCGATCACGAGGAGGaagagcaggagcaggagcaaaTTGAGGACACCAAGAAAActccaaaaagcaaaacaccGCTTTCAAGAAGGAAGagaaaagttaattaa
Protein Sequence: MSENAKTKNDSERSCLHCRVHNSKQQFQEIFDEVGIDIELPDLLAKYFHINVKPDPQKQQLLCQECVKTLIRFFDIDELQREQDAANAAKKQAKQPEGTPKATNETAKKETKGVKKQISPANKAKTEPKKMPVAVKLAAKPKPAKVVATVEPASIRVTRAKSVAVTPKAKPKPIEKSSVKTVGRKSRSKEAGSGEQEQISELLRDILDDEKAASDDKFAEAAATVRQLETQAVQEEEQQERQQQQQQDNCDELEFLLEQEDASSDMDVQHFKVENYALVDSSQSQTEDESVKVEPFNFVLIKESDDIADLYEYLSTVVRTCFETLTFEWSTVCCHCSLKCQQFESLLGHMHKCHQLPEERFKCPIANCNAELQGSKYLAMHLVVLHAPVADIPIYGCCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYADNNIDNLFQHLHYSHEPEGTLFCDICDRNFRDATVFAEHNKCHSNVTSTTYTCTTCSANFDTRGRLNGHIRTRHGSIISCELCSREFATEATYNIHMKKHLIIEREIHYCSNCGQLSENHDKMLAHVEDASTDCFNVEIHVELVRDAYVCEYCSCYFRQKTDLRDHRDSGVHKDNLFWCQPCGKAFSDMKLYRHHLRNYQQQRADVEHRKLEVCLYFMCDYEDCFEAYINWNSLYTHKRRTHDGIEKQEGAKPNEWICQFCQKECRSKMSLSVHVARSHNNNNVTCSICKSSYKDDEALKKHHAYWHEPMECALCLKVVKSRRNFDTHMNVVHSNNKRYTCSVCEKGFFYKSEMEAHKRLHTQLFECDQCTFTTRNKKSLAVHVLGQHYKRFAFECKTCNKRFGRRQGLISHVQRIHGSNNTCRDYFENGCSKSFSTTAKLNVHVRKAHNGSIFLTDLDDDEQLEEEQELQLEEQDEEQAEEEQQEDEQPEDEQPEEEQPEEEQPEPKSQKPKAKRLASPGATTSKKRCVRLGNETQVELIPGDHEEEEQEQEQIEDTKKTPKSKTPLSRRKRKVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00569253; iTF_00479020;
90% Identity: iTF_00569253; iTF_00479020;
80% Identity: -