Basic Information

Gene Symbol
Arid4b
Assembly
GCA_035046005.1
Location
JAWNOK010000020.1:15308521-15310797[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-27 1.6e-23 83.1 0.0 1 88 300 385 300 386 0.96

Sequence Information

Coding Sequence
atgcagCAAGCGGACGATCCGCCATCGCTGCCCGTGGGCACCGAGGTGAGCGCCAAATACAAGGGCGCCTTTTGCGAGGCCAAAGTGAGCAAAGTTGTGCGAAACATTAAAGTGAAGGTCGCCTACAAGCAGGGCCTAGGATCTGGTATTGTGTCCGATGATGCCATTAAGGCGCCATCGGGTCAGCTACGTGTGGGGGCCGTCGTGGAGGTGCGCCATCCCGATCGCAAGGAGACTGTGGAGGCGACCATAACTAAAATCCAGGATTGTTCCCAATACACCGTCGTCTTTGATGACGGCGATATAACAACATTGAGAAGAACGGCGCTATGCTTGAAAAGTGGCAGGCATTTTAATGAGAGCGAAACATTGGATCAGTTGCCGTTAACACATCCGGAGCATTTTGGCAATCCCGTTGTGGGTGGACGACGTGGACGTCGTCGTGGACAATTAAATGATGGGAGCtccgatgatgatgatgagagTGATGCCAAGGAGGTGGTCAACGAGAAGGAGGAGAATATTGGCAAGGTTGTTTGCGTTGAGACCGAGTCAAAGAAAAAGGATAAAGAGAAGTGGTTTCCTGCCCTGGTCGTGGCACCCACGGCGCAGGTAAGCAAACAGGCAACTGTGCGCATACGAGTGAAGGACGAGTATCTGGTGAGGTCATTTAAGGATGGACGCTACTACACAGTGCCCAAGAAGGAGGCTAACGAGTTCACACGCGAAATGGCCACCAAACAGGATGGACCAGCTGTGCTAGCAGCCATTGAGTTTCTCGACAGCAGTGTGCTGCCCGCCCACTGGGATCGCGACTCCCTTTTCGGTCTGTCGAATCTAACGAGCGATGATGAGGGTGAAATCGATACGGATTCATCCGACGATGAGCCGCATGAGGAGAAGGATCTGTTTGTGGCACAATTGTACAAATATATGGATGATCGCGGCACACCATTGAACAAGGTGCCCTCCATACTGAGTCGCGACGTGGACCTGTATCGTCTATTCCGCGCCGTACAGAAACGCGGTGGTTACAATCGAATCACCTCTAGAAATCAGTGGAAAATTATTGCTGTGCGTTTGGGCTTTGTGCCCTGCACGCTCTCCGTGACGAATCTGGTGAAGCAGGCATACAAGAAATTTCTGCAGCCCTACGGGGATTTCCATCGCAAACTGGGTTGCTCCATGCTGATGCCGTCACGCAACTCGAATCGCAGCAAAGGACGCAGTTTGGTTCGTGCCAATTCAGTGGCATCTCCCAAACCCGCTGAGACGACAAAAATGGAAACGATTAGCAAATTGGCAGTGGCCAAtcaaacagcagctgcaaatgcTGCATCCgctgcagcggcaacaacatcaacggCTGCTAGCAGTGGCGGTAGTGGTAGTGGCAacactgctgcagctgccacgcctctaAGAGCTGCCTCAAGAGCCTCACAGTCGGCAGCAGAGGAGTCGGAGAACACAAGTGAATCGAGTGTTGTCGTTGAACCTGTTAAGAAACAACGCAAAGCATCAGCAGCCGGCAGTGGCAAAGTTAAAAGTCTTGTGGATAAGTACGAGGAGAAGTCTTCGGAGAAATCCTCCGAAAAATCccatgcagcaacaacaacagcagcagccagtaCCTCCACTAGTACCACAACgacaactacagcagcagctggatcgtcaacatcaacaactacagctgctgcttcagcaactgcaactgctgtcAATGTCATCAGCAATTCAGCAGCTGCTACatcggcagcaacagcatctaCTGCTGCAGCAAGTGCATCAACTTCAGCGACAACAGGCAGCGCAGCGAGCAGTAAGGATGCAGATGCAGATGTGCCCTTGTCCAGGATCAAGGCTGCAACTGCCACACGCAACAGCATCGACAAGGAACCcagcactgctgctgctagtgGTGGCAGCAGTGCCTCTAGCAAGGCAGCATCCGAAACCCAACGCAGTCGGGATGCTTCTCCCTCACCAGGTAAATGCTTTGATCAACTGTCTTTTAAAATCTGCACATCGGTAGGAAAAGAAATCTTTACTTCGCAAGGGACTCAGTTGGTTGTCTCTTTTGCTTCTAGATTTGTGAGCGAAAGAGAAAAGGCAGGACCTTACAAAACAGGACCTAAAGTCTTCAGCTAG
Protein Sequence
MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPSGQLRVGAVVEVRHPDRKETVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREMATKQDGPAVLAAIEFLDSSVLPAHWDRDSLFGLSNLTSDDEGEIDTDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRITSRNQWKIIAVRLGFVPCTLSVTNLVKQAYKKFLQPYGDFHRKLGCSMLMPSRNSNRSKGRSLVRANSVASPKPAETTKMETISKLAVANQTAAANAASAAAATTSTAASSGGSGSGNTAAAATPLRAASRASQSAAEESENTSESSVVVEPVKKQRKASAAGSGKVKSLVDKYEEKSSEKSSEKSHAATTTAAASTSTSTTTTTTAAAGSSTSTTTAAASATATAVNVISNSAAATSAATASTAAASASTSATTGSAASSKDADADVPLSRIKAATATRNSIDKEPSTAAASGGSSASSKAASETQRSRDASPSPGKCFDQLSFKICTSVGKEIFTSQGTQLVVSFASRFVSEREKAGPYKTGPKVFS