Basic Information

Gene Symbol
Arid4b
Assembly
GCA_035045965.1
Location
JAWNOM010000484.1:8347665-8349733[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-29 3.4e-26 91.5 0.1 1 88 303 388 303 389 0.96

Sequence Information

Coding Sequence
ATGCATATGTTGCAGCAAGTGGACGATCCGCCATCGCTGCCCGTGGGCACCGAGGTGAGCGCCAAGTACAAAGGAGCCTTCTGCGAGGCCAAAGTCAGTAAAGTGGTTCGTAACATCAAAGTGAAGGTCGCCTACAAACAGGGTCTCGGCTCGGGCATTGTATCGGACGATGCCATCAAGGCGCCACCTGGACAGCTGCGCGTCGGCGCCGTTGTCGAAGTGCGTCATCCAGATCGAAAGGAGAATGTGGAGGCGACCATAACTAAAATCCAGGATTGTTCTCAATATACGGTCGTCTTTGACGACGGCGATATCACAACGTTACGTCGCACTGCGCTCTGTCTGAAGAGCGGCAGGCATTTCAATGAGAGTGAAACATTGGATCAGCTGCCGTTAACACATCCCGAACACTTCGGCAATCCGGTTGTGGGCGGTCGTCGGGGTCGTCGTCGCGGCCAATTGAACGATGGCAGCtccgacgatgatgacgaaAGCGATGCAAAGGAAGTGGTCAACGAGAAGGAGGAGCACATTGGCAAAGTGGTGTGCGTGGAGACCGAGTCCAAGAAGAAGGACAAAGAGAAATGGTTTCCCGCCCTCGTCGTGGCGCCTACAGCGCAAGTCAGCAAACAGGCTACTGTGCGGATACGCGTCAAGGACGAGTATCTGGTGCGGTCCTTCAAGGATGGCCGCTACTACACAGTGCCTAAGAAGGAGGCGAACGAATTCACACTTGAAATGGCCAGCAAACAGGACGTGCCCGCTGTGAAGGCAGCTTTCGAATTCCTCGACAGCAGTAAATTGCCAGCCCACTGGGATCGCGACTCGCTGTTTGGCTTATCCAATCTGACTAGCGACGATGAGGGCGAAATCGATTCGGACTCGTCGGACGACGAGCCACACGAGGAGAAGGATCGGTTCGTTGCCCAGCTATACAAGTATATGGACGATCGGGGCACCCCATTGAACAAGGTGCCATCGATACAGAGTCGCGACGTGGATCTATACCGTCTGTTCCGGGCGGTGCAAAAGCGTGGTGGCTACAATCGCGTCACCGCCAAAAATCAATGGAAAGTAATTGCCATGCGGCTGGGCTTCACGCCCTGCACCCTGAGCGTCATGAATCTGGTGAAGCAGGCCTATAAAAAATTTCTACAGCCCTATGGAGACTTTCATCGTAAGCTCGGCTGCTCTATGCTGATGACGTCTCGCGCCTCGAATCGCAGCAAGGGGCGCAGTCTGGTGCGTGCCAATTCGGTGGCCTCACCCAAGCCGGTGGAGACCACGAAAGTAGAAACCATTAGCAAACTGGCGGTGCCCAATCAGACCACGGTGGCCGCCAGTGGCGCCTCCTCGACTAccaccacagcagcaactggcagcGGTGGCGGCAGTGCAGCAACTACTACGCCCGTACGCGCCGCCTCAACGGCCTCGCAGTCGGCCACTGAAGAATCGGAGAACACGAGCGAGTCCAGCGTGGCTGTGGAGCCGGTTAAAAAACAACGCAAAGCATCCGCCGCCAACAGCGGCAAGGTCAAGAGTCTGGTGGAGAAATACGAGGAGAAATCAACGTCCGTATCGAGCATTGGCCCAGTCGCAACAGCAGCGCTCAACACGAGCAATGTGAGCAGCGCTgctacagctgcagcaggagcagcatcaacagcagccggatcaggagcagcagcagccgcagctacagcatcatcatcatcatcatcatcatcatcagcagcagctgcttcgtccacagcagcaacaacaacagctgctgccactgtcaaggctgaggctgaggcggATATTCCGCTGGCTAAGATCAAGGCCTCGTCCGTATCGACGCGTAACAGCATGGACAAGGAGCCCAACGCTGGCGGCAGCAATGCATCCAGCAAGGCCACCTCGGAGACCCAACGCAGTCGCGATGCATCGCCCACAACGGGTAAGTGCAAGAGATCTTATCTTATATATCCGGACATCATAGAACTCTGGGTTAGTTTATAG
Protein Sequence
MHMLQQVDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPPGQLRVGAVVEVRHPDRKENVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTLEMASKQDVPAVKAAFEFLDSSKLPAHWDRDSLFGLSNLTSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKVIAMRLGFTPCTLSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRASNRSKGRSLVRANSVASPKPVETTKVETISKLAVPNQTTVAASGASSTTTTAATGSGGGSAATTTPVRAASTASQSATEESENTSESSVAVEPVKKQRKASAANSGKVKSLVEKYEEKSTSVSSIGPVATAALNTSNVSSAATAAAGAASTAAGSGAAAAAATASSSSSSSSSAAAASSTAATTTAAATVKAEAEADIPLAKIKASSVSTRNSMDKEPNAGGSNASSKATSETQRSRDASPTTGKCKRSYLIYPDIIELWVSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00470644;
90% Identity
iTF_00493425;
80% Identity
-