Basic Information

Gene Symbol
Arid4b
Assembly
GCA_035045365.1
Location
JAWNPC010000481.1:4098799-4100850[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-29 3.8e-26 91.5 0.1 1 88 313 398 313 399 0.96

Sequence Information

Coding Sequence
atggaattCACATATTTGAACAATGTGCGCGTTACAATGTTACAGCAAGTGGACGATCCGCCATCGCTGCCCGTGGGCACCGAGGTGAGCGCCAAGTACAAAGGAGCCTTCTGCGAGGCCAAAGTCAGCAAAGTAGTGCGCAACATCAAAGTGAAGGTTGCCTACAAACAGGGTCTCGGCTCAGGCATTGTATCGGACGATGCCATCAAGGCGACACCGGGCCAGCTGCGCGTTGGCGCCGTCGTGGAAGTGCGTCATCCGGATCGCAAGGAAAATGTGGAGGCGACCATTACCAAAATCCAGGACTGCTCACAATATACGGTCGTCTTTGACGATGGCGATATCACAACGTTGCGTCGGACGGCGCTTTGTCTGAAGAGCGGGCGGCATTTCAATGAGAGCGAAACATTGGATCAGCTGCCGCTAACACATCCCGAGCATTTTGGCAATCCGGTGGTGGGCGGTCGTCGGGGACGTCGCCGCGGACAGCTGAATGATGGCAGCtccgatgatgacgatgagaGCGATGCCAAGGAGGTGGTCAACGAAAAAGAGGAGCACATTGGCAAAGTGGTTTGCGTGGAGACCGAGTCAAAGAAGAAGGACAAAGAGAAATGGTTTCCCGCTCTCGTTGTGGCGCCCACAGCGCAGGTCAGCAAACAGgCCACTGTGCGGATACGCGTCAAGGACGAGTATCTGGTGCGGTCCTTCAAGGATGGCCGCTACTATACGGTGCCCAAGAAAGAGGCGAATGAATTCACACGCGAGATGGCCAGCAAACAGGACGTGCCTGCTGTGAAGGCAGCTTTCGAGTTTCTCGATAGCAGCAAATTGCCTGCCCACTGGGATCGCGACTCGCTCTTTGGCCTGTCCAATCTAACGAGCGATGATGAGGGGGAAATCGACTCGGATTCATCGGACGATGAGCCGCACGAGGAGAAGGATCGCTTCGTTGCAcagctatacaaatatatggaCGATCGGGGCACACCATTGAACAAGGTGCCATCGATACAGAGCCGCGACGTGGATCTGTATCGTCTGTTCCGAGCGGTGCAAAAGCGCGGCGGCTACAATCGCGTAACCACCAAAAACCAATGGAAAGTAATTGCCATGCGTCTGGGCTTTACGCCGTGCACGCTGAGCGTCATGAATCTTGTGAAGCAGGCGTATAAGAAGTTTCTACAGCCCTACGGTGACTTTCATCGCAAACTGGGCTGCTCCATGCTGATGACGTCGCGCAACTCGAACCGCAGCAAGGGGCGCAGTCTGGTGCGTGCCAATTCGGTGGCCTCGCCCAAGCCGGCGGACACCACCAAAATGGAAACCATTAGCAAACTGGCGGTGGCCAATCAGACaacggctgccgctgccgctgccgccgccgccagcagcagcagcagtggtggtggtgctggtggcgccactgttgctgcagcagcagccagcggaAGTGgaagtgcagcagctgccacgcccgtACGCGCCGCCTCAACGGCCTCGCAGTCAGCCACTGAGGAATCGGAGAATACCAGCGAGTCCAGCGTGGTGGTGGAGCCGGTTAAGAAACAGCGCAAAGCATCCGCCGCCAGCAGCGGCAAAGTCAAAAGTCTAGTGGAGAAATATGAGGAGAAATCATCCTCCATTTCCAGCGTTGGCCCAGTCGCCACAGCAGCGATCAACACAGCcaatatcagcagcagcacaacagcaactgcagcagcgacagcagcaacaactgcaacagcaacagcagctgctgctgctgctgccaccgtCAAGGCCGAAGCTGAGGCGGATATGCCACTGGCAAAGATCAAGGCTGCATCAGTATCGACACGCAACAGCATGGAGAAGGAGCCCAGCGCTGCAGGCAGCAATGCCTCCAGCAAAGCAGCCTCGGAAACCCAACGCAGTCGCGATGCATCCCCAACAACTGGTAAGTGCAAGAGACTTTTATTGCGGTTCCCTCAACTTGTCACCAGTTGA
Protein Sequence
MEFTYLNNVRVTMLQQVDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKATPGQLRVGAVVEVRHPDRKENVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREMASKQDVPAVKAAFEFLDSSKLPAHWDRDSLFGLSNLTSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTTKNQWKVIAMRLGFTPCTLSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADTTKMETISKLAVANQTTAAAAAAAAASSSSSGGGAGGATVAAAAASGSGSAAAATPVRAASTASQSATEESENTSESSVVVEPVKKQRKASAASSGKVKSLVEKYEEKSSSISSVGPVATAAINTANISSSTTATAAATAATTATATAAAAAAATVKAEAEADMPLAKIKAASVSTRNSMEKEPSAAGSNASSKAASETQRSRDASPTTGKCKRLLLRFPQLVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00470644;
90% Identity
iTF_00476402;
80% Identity
-